| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,079,730 | C→A | intergenic (‑20177/‑52373) | unknown ← / → unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,079,730 | 0 | C | A | 100.0% | 168.8 / NA | 63 | intergenic (‑20177/‑52373) | unknown/unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (25/38); total (25/38) | |||||||||||
TTGCATTAAAACAACAACTAAAGGGAAAAGATTATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCCGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCCGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACTTTGCCGAAAAGCGAAAAAACGCGCGAGAAAGTGACCGCACTTTTGGGATCCCGGTCGCAAAATCAAGAAAA > 1/1079486‑1079975 | ttGCATTAAAACAACAACTAAAGGGAAAAGATTATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGgc < 1:235990/251‑1 (MQ=255) tGCATTAAAACAACAACTAAAGGGAAAAGATTATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGgct < 1:183111/251‑1 (MQ=255) gCATTAAAACAACAACTAAAGGGAAAAGATTATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCCACCGCCGCCGTTgcagcccg > 1:363739/1‑246 (MQ=255) ttAAAACAACAACTAAAGGGAAAAGATTATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTc < 1:105697/251‑1 (MQ=255) acaacaacTAAAGGGAAAAGATTATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGttt < 1:719934/251‑1 (MQ=255) acaacTAAAGGGAAAAGATTATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTa < 1:396418/251‑1 (MQ=255) acTAAAGGGAAAAGATTATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAACCCGCTGCTCCGTTTGTAccg > 1:57009/1‑251 (MQ=255) gggAAAAGATTATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCCGtt > 1:265864/1‑251 (MQ=255) aGATTATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTg < 1:269059/234‑1 (MQ=255) aTTATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGc < 1:359199/250‑1 (MQ=255) ttATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTTTACCGCCCGTTCAGCCGc > 1:405634/1‑249 (MQ=255) tCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCCCTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGc < 1:481310/251‑1 (MQ=255) aTTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGaa < 1:185090/250‑1 (MQ=255) aTTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGaa > 1:846842/1‑250 (MQ=255) aTTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAAc < 1:169252/251‑1 (MQ=255) tttCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCa < 1:96406/251‑1 (MQ=255) gCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTAc > 1:153961/1‑192 (MQ=255) aTGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTTACTTTCTCACCGACCGCTGCCGTTTCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTTCGCCGCCACGGCAGAAACCGCAAACACCGAACCTAACACGaa > 1:737230/1‑251 (MQ=255) gCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCCACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACa > 1:339686/1‑251 (MQ=255) tGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGa < 1:550810/251‑1 (MQ=255) cTTCCAGCAACTGCTCCCCGGAGCTGAAATTACCGTGTTTTTCCCGATACTGCACCCCCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCGCTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCGGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGc < 1:662299/250‑1 (MQ=255) cTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCCTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGc > 1:521201/1‑250 (MQ=255) tCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAg < 1:98025/242‑1 (MQ=255) cTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCACCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAAc > 1:442844/1‑232 (MQ=255) cccACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCAt < 1:468797/250‑1 (MQ=255) gcgcTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGa > 1:741453/1‑237 (MQ=255) aaaTTACCGTGTTTTTCCCGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCCGCAGCACTGGCGGTGTTAATATTCACTTTCTCCCCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAg < 1:442659/250‑1 (MQ=255) aaaTTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAg < 1:380435/250‑1 (MQ=255) aaaTTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAg < 1:249682/250‑1 (MQ=255) aaaTTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAg < 1:47401/250‑1 (MQ=255) aaTTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTg < 1:602078/251‑1 (MQ=255) tCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGGTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGGTTCATTGCTTTCATAGGGATTCCTTTTCTGa > 1:307330/1‑250 (MQ=255) aTACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACCCCGAACCTAACACGAACAGCGAAGCCCAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAg > 1:392552/1‑251 (MQ=255) aTACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAAc < 1:727664/196‑1 (MQ=255) aTACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGGTTCATTGCTTTCATAGTGATTCCt > 1:869125/1‑238 (MQ=255) cTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAg < 1:466289/227‑1 (MQ=255) gCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGGTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTaaa > 1:585417/1‑251 (MQ=255) cccaccGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAaaac < 1:95623/250‑1 (MQ=255) ccgcttccgcttTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAaaacaaaa > 1:431931/1‑250 (MQ=255) gCACCGATGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAaaac < 1:297707/230‑1 (MQ=255) aTGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATAc < 1:559355/251‑1 (MQ=255) tGCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACt < 1:277347/251‑1 (MQ=255) gCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCt < 1:411047/187‑1 (MQ=255) gCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAaaac > 1:211190/1‑222 (MQ=255) gCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACtt > 1:896301/1‑251 (MQ=255) gCCTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACtt > 1:705/1‑251 (MQ=255) ccTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACtt < 1:328714/250‑1 (MQ=255) ccTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACtt < 1:408407/250‑1 (MQ=255) cTACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAg < 1:345451/172‑1 (MQ=255) tACAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACTTTGc < 1:831153/251‑1 (MQ=255) cAAGGGCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCCCTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATAc < 1:307317/244‑1 (MQ=255) ggCTTTTTGAATTTCTGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACTTTGCCGaaa < 1:720879/250‑1 (MQ=255) aaTTTCTGCAGCACTGGCGGTGTTAATATTCACTTTTTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTTATAGTGATTCCTTTTCTGACTAAAGTTAaaacaaac > 1:458700/1‑208 (MQ=255) cTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAacac < 1:706269/125‑1 (MQ=255) gtgtTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGa < 1:802347/138‑1 (MQ=255) gtgtTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACTTTGCCGAAAAGCGAAAAAACGCGCGAGAAAGTGACCg > 1:681419/1‑250 (MQ=255) gtgtTAATATTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACTTTGCCGAAAAGCGAAAAAACGCGCGAGAAAGTGACCg > 1:150034/1‑250 (MQ=255) atatTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACTTTGCCGAAAAGCGAAAAAACGCGCGAGAAAGTGACCGCACtttt > 1:264723/1‑251 (MQ=255) atTCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTg < 1:818903/151‑1 (MQ=255) tCACTTTCTCACCGACCGCTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACTTTGCCGAAAAGCGAAAAAACGCGCGAGAAAGTGACCGCACTTTTGGGa < 1:140061/251‑1 (MQ=255) cTGCCGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAac > 1:344941/1‑77 (MQ=255) cGTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACTTTGCCGAAAAGCGAAAAAACGCGCGAGAAAGTGACCGCACTTTTGGGATCCCGGTCGCAAAATCAAGaaa < 1:550087/251‑1 (MQ=255) gTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACTTTGCCGAAAAGCGAAAAAACGCGCGAGAAAGTGACCGCACTTTTGGGATCCCGGTCGCAAAATCAAGaaaa > 1:711737/1‑251 (MQ=255) gTTGCAGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACTTTGCCGAAAAGCGAAAAAACGCGCGAGAAAGTGACCGCACTTTTGGGATCCCGGTCGCAAAATCAAGaaaa > 1:485426/1‑251 (MQ=255) | TTGCATTAAAACAACAACTAAAGGGAAAAGATTATAAGGCGATACGGTCGCGATTTTTTTCTAAGGTCGCTTTGCCGATGCCCTGCACTTCCAGCAACTGCTCCACGGCGCTGAAATTACCGTGTTTTTCACGATACTGCACCACCGCTTCCGCTTTTTTCGCACCGATGCCTACAAGGGCTTTTTGAATTTCCGCAGCACTGGCGGTGTTAATATTCACTTTCTCACCGACCGCTGCCGTTGCCGCCGGCTGCTCCGTTTGTACCGCCGGTTCAGCCGCTTTTTCCGCCGCCACGGCAGAACCCGCAAACACCGAACCTAACACGAACAGCGAAGCCAAAAGATGTTTCATTGCTTTCATAGTGATTCCTTTTCTGACTAAAGTTAAAACAAACGTTGAATCAATCAACGGGCATACTTTGCCGAAAAGCGAAAAAACGCGCGAGAAAGTGACCGCACTTTTGGGATCCCGGTCGCAAAATCAAGAAAA > 1/1079486‑1079975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |