Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,076,642 T→C intergenic (‑17089/‑55461) unknown ← / → unknown tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,076,6420TC100.0% 221.6 / NA 79intergenic (‑17089/‑55461)unknown/unknowntRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (35/44);  total (35/44)

GATATTGGTGTAACCTGCGTCGTGCAAGGTGTCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACTGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAATGCAGATGAAATTTTTTGCTAGTGCAGCCACAATTTTTTCACGTGTCAGCGC  >  1/1076399‑1076887
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                     
gATATTGGTGTAACCTGCGTCGTGCAAGGTGTCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCa                                                                                                                                                                                                                                                >  1:107395/1‑251 (MQ=255)
 atatTGGTGTAACCTGCGTCGTGCAAGGTGTCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCAt                                                                                                                                                                                                                                               >  1:34260/1‑251 (MQ=255)
      ggTGTAACCTGCGTCGTGCAAGGTGTCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAAt                                                                                                                                                                                                                                            >  1:653842/1‑249 (MQ=255)
      ggTGTAACCTGCGTCGTGCAAGGTGTCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAAt                                                                                                                                                                                                                                            >  1:481977/1‑249 (MQ=255)
      ggTGTAACCTGCGTCGTGCAAGGTGTCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGCCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAAt                                                                                                                                                                                                                                            >  1:218300/1‑249 (MQ=255)
           aaCCTGCGTCGTGCAAGGTGTCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCaaaa                                                                                                                                                                                                                                     >  1:29009/1‑251 (MQ=255)
                 cgtcgtGCAAGGTGTCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGc                                                                                                                                                                                                                               <  1:457796/251‑1 (MQ=255)
                   tcgtGCAAGGTGTCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGcac                                                                                                                                                                                                                             <  1:299704/251‑1 (MQ=255)
                             tgtCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAaata                                                                                                                                                                                                                   <  1:67185/251‑1 (MQ=255)
                             tgtCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAaat                                                                                                                                                                                                                    <  1:156648/250‑1 (MQ=255)
                              gtCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATa                                                                                                                                                                                                                                              <  1:686333/223‑1 (MQ=255)
                                            ggTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATg                                                                                                                                                                                                                <  1:674955/239‑1 (MQ=255)
                                            ggTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCg                                                                                                                                                                                                    >  1:828786/1‑251 (MQ=255)
                                                        ccAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAaat                                                                                                                                                                                                                    >  1:622002/1‑223 (MQ=255)
                                                                  gAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATAtt                                                                                                                                                                              >  1:9447/1‑251 (MQ=255)
                                                                      ttGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCgg                                                                                                                                                                          <  1:304136/251‑1 (MQ=255)
                                                                      ttGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCgg                                                                                                                                                                          <  1:354776/251‑1 (MQ=255)
                                                                         aTTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTg                                                                                                                                                                        <  1:282818/250‑1 (MQ=255)
                                                                         aTTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTg                                                                                                                                                                        >  1:336056/1‑250 (MQ=255)
                                                                                   tATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGcac                                                                                                                                                                                                                             <  1:685888/187‑1 (MQ=255)
                                                                                      cTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGcc                                                                                                                                                          <  1:642447/251‑1 (MQ=255)
                                                                                        aaTGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGt                                                                                                                                                                                                               <  1:886098/196‑1 (MQ=255)
                                                                                        aaTGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCAc                                                                                                                                                        <  1:297714/251‑1 (MQ=255)
                                                                                             aaCTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAAtt                                                                                                                                                   <  1:212389/251‑1 (MQ=255)
                                                                                                  tGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCAACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTAcgc                                                                                                                                              <  1:412624/251‑1 (MQ=255)
                                                                                                       gTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTa                                                                                                                                                      >  1:543971/1‑238 (MQ=255)
                                                                                                        tCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCAcc                                                                                                                                        <  1:530851/251‑1 (MQ=255)
                                                                                                          aTGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTg                                                                                                                                      <  1:12260/251‑1 (MQ=255)
                                                                                                            gTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAAt                                                                                                                                                                                                                                    >  1:690149/1‑155 (MQ=255)
                                                                                                            gTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTcaccac                                                                                                                                                                                            >  1:744403/1‑195 (MQ=255)
                                                                                                            gTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTcac                                                                                                                                                                                               <  1:557076/192‑1 (MQ=255)
                                                                                                            gTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTgcgc                                                                                                                                                                     >  1:479626/1‑218 (MQ=255)
                                                                                                            gTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACg                                                                                                                                                            >  1:703596/1‑227 (MQ=255)
                                                                                                            gTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCg                                                                                                                                    >  1:185403/1‑251 (MQ=255)
                                                                                                            gTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCg                                                                                                                                    >  1:392575/1‑251 (MQ=255)
                                                                                                                         tATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAgg                                                                                                                       <  1:790185/251‑1 (MQ=255)
                                                                                                                         tATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAgg                                                                                                                       <  1:430686/251‑1 (MQ=255)
                                                                                                                           tttttAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGaa                                                                                                                     <  1:550404/251‑1 (MQ=255)
                                                                                                                           tttttAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGaa                                                                                                                     <  1:780668/251‑1 (MQ=255)
                                                                                                                                     aTTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGAt                                                                                                           <  1:860966/251‑1 (MQ=255)
                                                                                                                                              ccATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGaa                                                                                                                     <  1:410184/232‑1 (MQ=255)
                                                                                                                                                aTTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAgg                                                                                                                       <  1:87945/228‑1 (MQ=255)
                                                                                                                                                aTTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAgg                                                                                                                       >  1:858148/1‑228 (MQ=255)
                                                                                                                                                aTTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGa                                                                                                >  1:103490/1‑251 (MQ=255)
                                                                                                                                                aTTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGa                                                                                                >  1:306702/1‑251 (MQ=255)
                                                                                                                                                  tCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGaaa                                                                                              >  1:102492/1‑251 (MQ=255)
                                                                                                                                                       gTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGt                                                                                            <  1:837803/248‑1 (MQ=255)
                                                                                                                                                              cAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGaa                                                                                                                     <  1:195755/216‑1 (MQ=255)
                                                                                                                                                                attcccGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCCCCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAacac                                                                                <  1:643959/247‑1 (MQ=255)
                                                                                                                                                                aTTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAacac                                                                                <  1:613728/251‑1 (MQ=255)
                                                                                                                                                                aTTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAacac                                                                                <  1:12427/251‑1 (MQ=255)
                                                                                                                                                                 ttaacGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGAAGAGCCTAAcaca                                                                               >  1:794798/5‑251 (MQ=255)
                                                                                                                                                                  tACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACAt                                                                              >  1:887744/1‑251 (MQ=255)
                                                                                                                                                                      gTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGc                                                                                                                                                           <  1:859519/170‑1 (MQ=255)
                                                                                                                                                                            gccgACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCtgctt                                                                    >  1:557962/1‑251 (MQ=255)
                                                                                                                                                                                aCCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGaa                                                                                                                     <  1:316269/198‑1 (MQ=255)
                                                                                                                                                                                 ccGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGctac                                                               <  1:652444/251‑1 (MQ=255)
                                                                                                                                                                                 ccGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGctac                                                               <  1:185824/251‑1 (MQ=255)
                                                                                                                                                                                         cgAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTACGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCcac                                                        <  1:448303/250‑1 (MQ=255)
                                                                                                                                                                                           aaGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGctac                                                               >  1:765418/1‑241 (MQ=255)
                                                                                                                                                                                             gATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAATg                                                    >  1:736097/1‑250 (MQ=255)
                                                                                                                                                                                              aTGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAATGc                                                   <  1:231541/250‑1 (MQ=255)
                                                                                                                                                                                              aTGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAATGc                                                   <  1:397537/250‑1 (MQ=255)
                                                                                                                                                                                                gCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGc                                                                                       >  1:238704/1‑212 (MQ=255)
                                                                                                                                                                                                 ccGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTc                                                                                                                                                                             <  1:256625/125‑1 (MQ=255)
                                                                                                                                                                                                 ccGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAATGCAGa                                                <  1:284313/250‑1 (MQ=255)
                                                                                                                                                                                                   gTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGc                                                                                                                                                           >  1:281056/1‑141 (MQ=255)
                                                                                                                                                                                                     tGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGc                                                                                                                                                           <  1:167987/139‑1 (MQ=255)
                                                                                                                                                                                                      ggTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAATGc                                                   <  1:780375/242‑1 (MQ=255)
                                                                                                                                                                                                      ggTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAATGCAGATGAAAt                                          >  1:177642/1‑251 (MQ=255)
                                                                                                                                                                                                         caccacACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGc                                                                                                       >  1:876416/1‑187 (MQ=255)
                                                                                                                                                                                                              cacCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAacac                                                                                <  1:126166/205‑1 (MQ=255)
                                                                                                                                                                                                              cacCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAAt                                                     >  1:220630/1‑232 (MQ=255)
                                                                                                                                                                                                                           gTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACg                                                                                                                                                                                           >  1:697469/1‑85 (MQ=255)
                                                                                                                                                                                                                           gTTTAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAATGCAGATGAAATTTTTTGCTAGTGCAGCCACaa                     >  1:175178/1‑251 (MQ=255)
                                                                                                                                                                                                                             ttAATTCTTTTTCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAATGCAGATGAAATTTTTTGCTAGTGCAGCCACAAtt                   <  1:267602/251‑1 (MQ=255)
                                                                                                                                                                                                                                        tCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCcac                                                        >  1:247543/1‑203 (MQ=255)
                                                                                                                                                                                                                                        tCCATCGCCACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAATGc                                                   >  1:4318/1‑208 (MQ=255)
                                                                                                                                                                                                                                               ccACCGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAATGCAGATGAAATTTTTTGCTAGTGCAGCCACAATTTTTTCACGTGTCAgcgc  <  1:106876/250‑1 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                     
GATATTGGTGTAACCTGCGTCGTGCAAGGTGTCTAAGGCGCTTTGGTGAACGCCTTCCAATAACACGAATTTGATTTTAGATTTATCTAATGAAACTTTGACTGTCATGTCTATCTCCGGTTATTTTTAAATGATTTTTGCGCCATTCGGGGTGCCGACAATTACCGTATCCGCCGACCGTAACGCGAAGATGCCGTTGGTCACCACACCCGCAATGTCGTTTAATTCTTTTTCCATCGCCACTGGATTCATAATCTCAAAATTATGCACATCCAAAATAATGTTGCCGTTATCGGTCACCACGCCTTCGCGATATTCCGGTGCGCCGCCTAACGCCACTAATTTACGCGCCACCTGCGAACGCGCCATAGGAATCACTTCGATTGGCAGCGGGAAAGTAGAGCCTAACACATCAACCTGCTTGCTACTATCCACAATGCAGATGAAATTTTTTGCTAGTGCAGCCACAATTTTTTCACGTGTCAGCGC  >  1/1076399‑1076887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑