Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,075,837	A→C	intergenic (‑16284/‑56266)	unknown ← / → unknown	tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,075,837	0	A	C	100.0%	207.5 / NA	77	intergenic (‑16284/‑56266)	unknown/unknown	tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (43/34);  total (43/34)

TTTTCCTGCGCTTCGGCAGTTGAACCGCCGATATGCGGGGTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGAGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATACCCAGTTTTTTGCCGCGCACTTCGTGTGAACCTACGGCGGAT  >  1/1075596‑1076081                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                     ggggggggcgttgcggtgtttaaaCCGCCGATATGCGGGGTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGAtt                                                                                                                                                                                                                                               <  1:638288/227‑1 (MQ=255)   ttCCTGCGCTTCGGCAGTTGAACCGCCGATATGCGGGGTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAAt                                                                                                                                                                                                                                           >  1:105816/1‑251 (MQ=255)         cgcTTCGGCAGTTGAACCGCCGATATGCGGGGTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACggg                                                                                                                                                                                                                                     <  1:322394/251‑1 (MQ=255)           cTTCGGCAGTTGAACCGCCGATATGCGGGGTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTg                                                                                                                                                                                                                                   >  1:765777/1‑251 (MQ=255)                gCAGTTGAACCGCCGATATGCGGGGTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACggg                                                                                                                                                                                                                                     >  1:279375/1‑244 (MQ=255)                 cattggatccgccgATATGCGGGGTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAgg                                                                                                                                                                                                                              <  1:312907/242‑1 (MQ=255)                    ttGAACCGCCGATATGCGGGGTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCaaa                                                                                                                                                                                                                          <  1:602700/251‑1 (MQ=255)                             cgATATGCGGGGTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACg                                                                                                                                                                                                                 <  1:164304/251‑1 (MQ=255)                                      gggTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGc                                                                                                                                                                                                              >  1:478018/1‑245 (MQ=255)                                      gggTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGaa                                                                                                                                                                                                        >  1:530780/1‑251 (MQ=255)                                      gggTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGaa                                                                                                                                                                                                        >  1:674545/1‑251 (MQ=255)                                       ggTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAAtt                                                                                                                                                                                                                                          >  1:901770/1‑216 (MQ=255)                                        gTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAat                                                                                                                                                                                                      >  1:627720/1‑251 (MQ=255)                                        gTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAat                                                                                                                                                                                                      >  1:688217/1‑251 (MQ=255)                                           aaTAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAatcac                                                                                                                                                                                                   <  1:751091/251‑1 (MQ=255)                                           aaTAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAatca                                                                                                                                                                                                    >  1:838836/1‑250 (MQ=255)                                                  cGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAg                                                                                                                                                                                            <  1:20302/251‑1 (MQ=255)                                                      gTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGAt                                                                                                                                                                                         >  1:23099/1‑250 (MQ=255)                                                                cGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATtc                                                                                                                                                                              <  1:753929/251‑1 (MQ=255)                                                                          aaaCGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTa                                                                                                                                                                    <  1:818577/251‑1 (MQ=255)                                                                           aaCGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGc                                                                                                                                                                      >  1:399765/1‑248 (MQ=255)                                                                                aTTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCCCCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACt                                                                                                                                                              <  1:422509/251‑1 (MQ=255)                                                                                aTTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACt                                                                                                                                                              <  1:355615/251‑1 (MQ=255)                                                                                aTTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACt                                                                                                                                                              <  1:783885/251‑1 (MQ=255)                                                                                   cttcATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGt                                                                                                                                                           >  1:825139/1‑251 (MQ=255)                                                                                       aTTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTgg                                                                                                                                                       <  1:29030/251‑1 (MQ=255)                                                                                         tAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCg                                                                                                                                                     <  1:852315/251‑1 (MQ=255)                                                                                          aaTGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGt                                                                                                                                                    >  1:612718/1‑251 (MQ=255)                                                                                          aaTGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGt                                                                                                                                                    >  1:270852/1‑251 (MQ=255)                                                                                                       tCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGc                                                                                                                                                                                                              >  1:768870/1‑180 (MQ=255)                                                                                                                                caccacGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATg                                                                                                               >  1:674450/1‑250 (MQ=255)                                                                                                                                    acGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGc                                                                                                                                      <  1:160555/223‑1 (MQ=255)                                                                                                                                       cACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGCTCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAg                                                                                                                                             >  1:466039/1‑213 (MQ=255)                                                                                                                                         cTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGt                                                                                                                                  >  1:126740/1‑222 (MQ=255)                                                                                                                                                    tcCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAg                                                                                                                                             >  1:43157/1‑200 (MQ=255)                                                                                                                                                         aGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCAcatc                                                                                                         <  1:83162/231‑1 (MQ=255)                                                                                                                                                                    aTGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGc                                                                          <  1:236578/251‑1 (MQ=255)                                                                                                                                                                      gCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCAcatc                                                                                                         >  1:727518/1‑218 (MQ=255)                                                                                                                                                                       cGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTg                                                                        <  1:424210/250‑1 (MQ=255)                                                                                                                                                                           aaTATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGc                                                                   <  1:249874/251‑1 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGAtt                                                                                                                                                                                                                                               >  1:428401/1‑76 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATtc                                                                                                                                                                              <  1:112973/141‑1 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTa                                                                                                                                                                >  1:210896/1‑155 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAg                                                                                                                                       <  1:590673/180‑1 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTc                                                                             <  1:36600/238‑1 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGc                                                                   >  1:668615/1‑248 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGa                                                                >  1:169495/1‑251 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGa                                                                >  1:895572/1‑251 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGa                                                                >  1:880641/1‑251 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGa                                                                >  1:436782/1‑251 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGa                                                                >  1:749412/1‑251 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGa                                                                >  1:777142/1‑251 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGa                                                                >  1:391691/1‑251 (MQ=255)                                                                                                                                                                              atCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGC‑ACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGat                                                               >  1:822003/1‑251 (MQ=255)                                                                                                                                                                                ccaccaCCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGata                                                              <  1:550665/251‑1 (MQ=255)                                                                                                                                                                                ccaccaCCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGata                                                              <  1:812518/251‑1 (MQ=255)                                                                                                                                                                                     accGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGAc                                                          >  1:646443/1‑250 (MQ=255)                                                                                                                                                                                        gtgccgcgtgccgcGTTAATTAAAATGGAATCCTGTTTTAACTGCGCAATGCGCTCCGCACTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGTAGAGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGCACTTGTTTGGCATTACCGAGCGGAAGTTTGTTTTCAATGTCGTAGAAATGCACATCCATGCCCAAGGATTCCGCAATGATGCTCAGCTGGGAACCGATATGACCATa                                                      >  1:579984/1‑251 (MQ=255)                                                                                                                                                                                                  ccgcgtTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGAt                                             <  1:369542/250‑1 (MQ=255)                                                                                                                                                                                                   cgcgtTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATAc                                           <  1:511898/251‑1 (MQ=255)                                                                                                                                                                                                    gcgtTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGa                                                                     <  1:440344/224‑1 (MQ=255)                                                                                                                                                                                                     cgtTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCATGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATAccc                                         <  1:424024/251‑1 (MQ=255)                                                                                                                                                                                                         aattaaAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATAccc                                         >  1:298510/1‑247 (MQ=255)                                                                                                                                                                                                              aaaTGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCAcatc                                                                                                         <  1:26284/178‑1 (MQ=255)                                                                                                                                                                                                               aaTGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATACCCAGTTTTTTg                                >  1:729061/1‑250 (MQ=255)                                                                                                                                                                                                                aTGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAAcc                                                   <  1:798507/230‑1 (MQ=255)                                                                                                                                                                                                                aTGGAATCCTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATACCCAGTTTTTTGc                               >  1:704734/1‑250 (MQ=255)                                                                                                                                                                                                                        cTGCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCg                                                                                                                                                     >  1:630095/1‑124 (MQ=255)                                                                                                                                                                                                                          gCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCGGCTGGGAGCCGATATGACCATAACCTACGATACCCAGTTTTTTGCCGCGCACTTCg                    >  1:341901/1‑251 (MQ=255)                                                                                                                                                                                                                          gCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAAc                                                    <  1:86808/219‑1 (MQ=255)                                                                                                                                                                                                                          gCTTTAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATACCCAGTTTTTTACCGCGCACTTCg                    >  1:294768/1‑251 (MQ=255)                                                                                                                                                                                                                              tAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGAc                                                          <  1:872424/209‑1 (MQ=255)                                                                                                                                                                                                                              tAACTGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATAccc                                         >  1:798594/1‑226 (MQ=255)                                                                                                                                                                                                                                  tGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATACCCAGTTTTTTGCCGCGCACTTCGTGTGAAcc            <  1:824290/251‑1 (MQ=255)                                                                                                                                                                                                                                  tGCGCGATGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATACCCAGTTTTTTGCCGCGCACTTCGTGTGAAcc            <  1:39001/251‑1 (MQ=255)                                                                                                                                                                                                                                        aTGCGCTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATACCCAGTTTTTTGCCGCGCACTTCGTGTGAACCTAcgg       >  1:670203/1‑250 (MQ=255)                                                                                                                                                                                                                                            gcTCCGCGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATACCCAGTTTTTTGCCGCGCACTTCGTGTGAACCTACGGCGGAt  >  1:41220/1‑251 (MQ=255)                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                     TTTTCCTGCGCTTCGGCAGTTGAACCGCCGATATGCGGGGTTAATAGCACGTTGTCGAATTTGCGTAACGGTGAAACGAATTCTTCATTAATGGAAGCCGGTTCTTTCGGGAACACGTCAATTGCCGCACCACGCACTTTGCCTTCTTCCAAAGCTTTTGCTAATGCGTCAATATCCACCACCGTGCCGCGTGCCGCGTTAATTAAAATGGAATCCTGCTTTAACTGCGCGATGCGCTCCGAGCTGATTAAATTACGGGTGGAAGGCAAATCCGGCACGTGCAGGGAAATCACATCACAGGATCCGAGCAATTCCTCCAGGCTACGTACTTGTTTGGCGTTACCGAGCGGGAGCTTGTTTTCAATGTCATAGAAATGCACATCCATCCCCAAAGATTCGGCAATGATGCTCAGCTGGGAGCCGATATGACCATAACCTACGATACCCAGTTTTTTGCCGCGCACTTCGTGTGAACCTACGGCGGAT  >  1/1075596‑1076081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑