Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,075,172	A→C	intergenic (‑15619/‑56931)	unknown ← / → unknown	tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,075,172	0	A	C	100.0%	156.7 / NA	55	intergenic (‑15619/‑56931)	unknown/unknown	tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (31/24);  total (31/24)

CTCAATAAGAGCGCGCCAAGTAGCGTTTTAAACTTCATAGAATATCCTTTAATCGAAGTGAAAGAGACCTTTATTACCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGAAATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTAACCGATTTTCGGGTCGGTTTGTAAGTATTGTGCGGCGATATTCACGTTG  >  1/1074927‑1075418                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       cTCAATAAGAGCGCGCCAAGTAGCGTTTTAAACTTCATAGAATATCCTTTAATCGAAGTGAAAGAGACCTTTATTACCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATAtt                                                                                                                                                                                                                                                   >  1:164946/1‑251 (MQ=255)     aTAAGAGCGCGCCAAGTAGCGTTTTAAACTTCATAGAATATCCTTTAATCGAAGTGAAAGAGACCTTTATTACCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTg                                                                                                                                                                                                                                                >  1:507389/1‑250 (MQ=255)                                   tCATAGAATATCCTTTAATCGAAGTGAAAGAGACCTTTATTACCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGgcg                                                                                                                                                                                                                  >  1:546562/1‑250 (MQ=255)                                   tCATAGAATATCCTTTAATCGAAGTGAAAGAGACCTTTATTACCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGgcg                                                                                                                                                                                                                  >  1:290154/1‑250 (MQ=255)                                      tAGAATATCCTTTAATCGAAGTGAAAGAGACCTTTATTACCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACt                                                                                                                                                                                                              <  1:361263/251‑1 (MQ=255)                                                        aaGTGAAAGAGACCTTTATTACCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGaaa                                                                                                                                                                                            >  1:551811/1‑251 (MQ=255)                                                            gAAAGAGACCTTTATTACCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGTTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAg                                                                                                                                                                                                       <  1:287277/236‑1 (MQ=255)                                                             aaaGAGACCTTTATTACCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACata                                                                                                                                                                                                                                                     >  1:503455/1‑189 (MQ=255)                                                                  gaCCTTTATTACCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGa                                                                                                                                                                                  >  1:572590/1‑251 (MQ=255)                                                                         attaCCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGaaattcattgtgtttttcc                                                                                                                                                                            <  1:344594/250‑17 (MQ=255)                                                                            aCCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCAc                                                                                                                                                                          >  1:792411/1‑249 (MQ=255)                                                                                                 cGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAata                                                                                                                                                   <  1:160013/251‑1 (MQ=255)                                                                                                        aaaaaaTCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAaac                                                                                                                                            <  1:713127/251‑1 (MQ=255)                                                                                                                   ttttttAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTg                                                                                                                                  <  1:226325/250‑1 (MQ=255)                                                                                                                    tttttAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCa                                                                                                                                >  1:60520/1‑251 (MQ=255)                                                                                                                              cccTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAacac                                                                                                                                                                                       >  1:374840/1‑186 (MQ=255)                                                                                                                                   aaTTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCg                                                                                                                 <  1:70350/251‑1 (MQ=255)                                                                                                                                         aTCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAg                                                                                                                                                                                                       <  1:65650/159‑1 (MQ=255)                                                                                                                                               aCGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGaa                                                                                                                            >  1:56667/1‑228 (MQ=255)                                                                                                                                                    atatatTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGAt                                                                                                                                                                                                                        >  1:114727/1‑131 (MQ=255)                                                                                                                                                      atatTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAacac                                                                                                                                       <  1:503340/210‑1 (MQ=255)                                                                                                                                                      atatTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGaa                                                                                                                            >  1:546450/1‑221 (MQ=255)                                                                                                                                                      atatTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATATCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCa                                                                                              >  1:842819/1‑251 (MQ=255)                                                                                                                                                             tGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACgg                                                                                       <  1:848203/251‑1 (MQ=255)                                                                                                                                                              gAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAata                                                                                                                                                   >  1:48243/1‑190 (MQ=255)                                                                                                                                                                   taATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGaa                                                                                                                            <  1:280605/208‑1 (MQ=255)                                                                                                                                                                    aaTTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTa                                                                                >  1:770624/1‑251 (MQ=255)                                                                                                                                                                     aTTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTAt                                                                               <  1:526939/251‑1 (MQ=255)                                                                                                                                                                       tAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGAt                                                                                                                                                                                                                        >  1:539550/1‑112 (MQ=255)                                                                                                                                                                            ggATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTg                                                                                     >  1:677827/1‑238 (MQ=255)                                                                                                                                                                                 tCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAata                                                                                                                                                                                                                                     <  1:418735/89‑1 (MQ=255)                                                                                                                                                                                  cATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCa                                                                   >  1:25143/1‑250 (MQ=255)                                                                                                                                                                                            aTCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTa                                                                                                                                                <  1:262182/163‑1 (MQ=255)                                                                                                                                                                                            aTCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATgacg                                                        >  1:332290/1‑251 (MQ=255)                                                                                                                                                                                            aTCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATgacg                                                        >  1:281438/1‑251 (MQ=255)                                                                                                                                                                                             tCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCAc                                                                                                                                                                          >  1:140215/1‑136 (MQ=255)                                                                                                                                                                                                 gTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATc                                                                                                                                                             >  1:889685/1‑145 (MQ=255)                                                                                                                                                                                                 gTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAaac                                                                                                                                            <  1:791593/162‑1 (MQ=255)                                                                                                                                                                                                 gTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACgg                                                                                       >  1:624628/1‑215 (MQ=255)                                                                                                                                                                                                 gTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTAt                                                                               <  1:87892/223‑1 (MQ=255)                                                                                                                                                                                                 gTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAA‑TTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTaa                                                  >  1:73519/1‑251 (MQ=255)                                                                                                                                                                                                  ttATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTaa                                                  >  1:238324/1‑251 (MQ=255)                                                                                                                                                                                                    ataGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTAAc                                                 >  1:335911/1‑250 (MQ=255)                                                                                                                                                                                                      aGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAacac                                                                                                                                       >  1:14830/1‑162 (MQ=255)                                                                                                                                                                                                       gAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTAACCGAt                                             >  1:352418/1‑251 (MQ=255)                                                                                                                                                                                                           gggTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCa                                                                                                                                                            <  1:201276/136‑1 (MQ=255)                                                                                                                                                                                                           gggTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAAc                                                                                         <  1:66447/203‑1 (MQ=255)                                                                                                                                                                                                                         ccATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACttttt                                                                                                                                                                <  1:652438/118‑1 (MQ=255)                                                                                                                                                                                                                          cATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTAACCGATTTTCGGGTCGGTTTGTAAg                          <  1:751343/251‑1 (MQ=255)                                                                                                                                                                                                                          cATCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTAACCGATTTTCGGGTCGGTTTGTAAg                          <  1:188872/251‑1 (MQ=255)                                                                                                                                                                                                                           aTCAGGACGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCg                                                                         >  1:560298/1‑203 (MQ=255)                                                                                                                                                                                                                                  cGTGATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTAACCGATTTTCGGGTCGGTTTGTAAGTATTGTgc                  <  1:184478/251‑1 (MQ=255)                                                                                                                                                                                                                                     gATGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTc                                                                           >  1:246056/1‑191 (MQ=255)                                                                                                                                                                                                                                       tGTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTAACCGATTTTCGGGTCGGTTTGTAAGTATTGTGCGGCGa             <  1:856363/251‑1 (MQ=255)                                                                                                                                                                                                                                        gTTGAGAAAGAAGACATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTAACCGATTTTCGGGTCGGTTTGTAAg                          <  1:695921/237‑1 (MQ=255)                                                                                                                                                                                                                                                 gaagacATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCa                                                                                                                                <  1:105207/126‑1 (MQ=255)                                                                                                                                                                                                                                                  aagacATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTAACCGATTTTCGGGTCGGTTTGTAAGTATTGTGCGGCGATATTCACGTTg  >  1:641079/1‑251 (MQ=255)                                                                                                                                                                                                                                                  aagacATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTAACCGATTTTCGGGTCGGTTTGTAAGTATTGTGCGGCGATATTCACGTTg  >  1:522453/1‑251 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       CTCAATAAGAGCGCGCCAAGTAGCGTTTTAAACTTCATAGAATATCCTTTAATCGAAGTGAAAGAGACCTTTATTACCTAAAACAAAGGGAAAGTGCGGTGATAAAAAATCATGTTTTTTAAACGCCCTGAATTCTATCAAAACGCTATATATTTTTGAATATAATTAGCAGGATTTCATAGGAGCAATCTTGTTATAGAATGGGTAACGCGATTGCCATCAGGACGTGATGTTGAGAAAGAAGAAATATTTTGCGAATCGAATATGTCGTTTTTGATTAGGCGCACTAAAAAAGTGCGGTGGAAAAACACAATGAATTTCCACCGCACTTTTTATCATGACTAATATTAAAACAACACCCGTGCACGAATGGTGCCGTCGATTTCGCGTAATTTCGCCAATAACGGTGCGGTATCTTCCGTTTCCACGTCAATGACGACGTAACCGATTTTCGGGTCGGTTTGTAAGTATTGTGCGGCGATATTCACGTTG  >  1/1074927‑1075418

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑