Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,065,749	T→C	intergenic (‑6196/‑66354)	unknown ← / → unknown	tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,065,749	0	T	C	100.0%	133.5 / NA	49	intergenic (‑6196/‑66354)	unknown/unknown	tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (29/20);  total (29/20)

TGTTTGGTTCGTGCATTTTAGATGAATGTGAAGCTCTAAATATTTACCTTTGAGATAATCAAAACTTTCGCCATCATCATCAAACACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGTGTATCTACCGTGATTTTTTCGCCGCCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGATCAAGGAAAGTTGGACGCAATATAGGTTCGTTATCTTGATGTGCTTTCCAAA  >  1/1065521‑1065990                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                  tGTTTGGTTCGTGCATTTTAGATGAATGTGAAGCTCTAAATATTTACCTTTGAGATAATCAAAACTTTCGCCATCATCATCAAACACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTcg                                                                                                                                                                                                                              >  1:728344/1‑250 (MQ=255)      ggTTCGTGCATTTTAGATGAATGTGAAGCTCTAAATATTTACCTTTGAGATAATCAAAACTTTCGCCATCATCATCAAACACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGccacca                                                                                                                                                                                                                        >  1:129789/1‑251 (MQ=255)                      aTGAATGTGAAGCTCTAAATATTTACCTTTGAGATAATCAAAACTTTCGCCATCATCATCAAACACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATg                                                                                                                                                                                                          <  1:56724/249‑1 (MQ=255)                               aaGCTCTAAATATTTACCTTTGAGATAATCAAAACTTTCGCCATCATCATCAAACACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAg                                                                                                                                                                                                <  1:861545/250‑1 (MQ=255)                                         tatTTACCTTTGAGATAATCAAAACTTTCGCCATCATCATCAAACACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATAcc                                                                                                                                                                                         >  1:475715/1‑247 (MQ=255)                                                              aaaCTTTCGCCATCATCATCAAACACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAg                                                                                                                                                                                                >  1:855142/1‑219 (MQ=255)                                                                             tcatcaAACACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTAct                                                                                                                                                   >  1:102440/1‑249 (MQ=255)                                                                             tcatc‑aACACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACTCTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCtt                                                                                                                                                >  1:483844/1‑251 (MQ=255)                                                                              catcaAACACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCtt                                                                                                                                                >  1:776713/1‑251 (MQ=255)                                                                               atcaAACACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCttt                                                                                                                                               >  1:522552/1‑251 (MQ=255)                                                                                  aaaCACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGAt                                                                                                                                            <  1:647907/251‑1 (MQ=255)                                                                                       cTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATAcc                                                                                                                                                                                         <  1:900137/201‑1 (MQ=255)                                                                                                 tctttctCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTActc                                                                                                                                                  <  1:742549/230‑1 (MQ=255)                                                                                                    ttctCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATg                                                                                                                          <  1:771063/251‑1 (MQ=255)                                                                                                    ttctCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATg                                                                                                                          >  1:254421/1‑251 (MQ=255)                                                                                                            gATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAgtgt                                                                                                                                                                                                     <  1:340541/168‑1 (MQ=255)                                                                                                            gATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATcc                                                                                                                                                         <  1:105814/212‑1 (MQ=255)                                                                                                                       ggCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCAc                                                                                                        >  1:759786/1‑250 (MQ=255)                                                                                                                                aataatTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAAc                                                                                                                                                                                                                  <  1:558056/135‑1 (MQ=255)                                                                                                                                aataatTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATcc                                                                                                                                                         >  1:504267/1‑192 (MQ=255)                                                                                                                                      tctcGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAatcatc                                                                                        <  1:734413/251‑1 (MQ=255)                                                                                                                                               tcatcaGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACcac                                                                                                                               <  1:620599/203‑1 (MQ=255)                                                                                                                                               tcatcaGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTg                                                                                >  1:389906/1‑250 (MQ=255)                                                                                                                                                     gATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAAtgt                                                                         >  1:383631/1‑251 (MQ=255)                                                                                                                                                     gATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAAtgt                                                                         >  1:772692/1‑251 (MQ=255)                                                                                                                                                      aTAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATc                                                                                                             >  1:656139/1‑214 (MQ=255)                                                                                                                                                         aTGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTActc                                                                                                                                                  <  1:78019/174‑1 (MQ=255)                                                                                                                                                         aTGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACcac                                                                                                                               >  1:150435/1‑193 (MQ=255)                                                                                                                                                         aTGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGttt                                                                     >  1:638070/1‑251 (MQ=255)                                                                                                                                                           gTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGttttt                                                                   >  1:424429/1‑251 (MQ=255)                                                                                                                                                              tttttATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATc                                                                <  1:258257/251‑1 (MQ=255)                                                                                                                                                                tttATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCAt                                                              >  1:101042/1‑251 (MQ=255)                                                                                                                                                                         ttttCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGAt                                                     <  1:227299/251‑1 (MQ=255)                                                                                                                                                                          tttCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAGTTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGAt                                                     >  1:409313/1‑250 (MQ=255)                                                                                                                                                                          tttCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAat                                                                                            >  1:140164/1‑211 (MQ=255)                                                                                                                                                                          tttCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGAt                                                     >  1:863613/1‑250 (MQ=255)                                                                                                                                                                                 ccATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGATCAAGGaaa                                             >  1:91628/1‑251 (MQ=255)                                                                                                                                                                                       gAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGATCAAGGaa                                              <  1:556492/244‑1 (MQ=255)                                                                                                                                                                                               cTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGtt                                                                                                                                      >  1:437119/1‑148 (MQ=255)                                                                                                                                                                                               cTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAAtg                                                                          <  1:406713/208‑1 (MQ=255)                                                                                                                                                                                                ttCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGATCAAGGAAAGTTGGACGCAAtata                              >  1:80330/1‑251 (MQ=255)                                                                                                                                                                                                      ctctTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGATCAAGGAAAGTTGGACGCAATATAGGTTc                         <  1:1217/250‑1 (MQ=255)                                                                                                                                                                                                      ctctTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGATCAAGGAAAGTTGGACGCAATATAGGTTCg                        <  1:329501/251‑1 (MQ=255)                                                                                                                                                                                                        ctTAAAAATAAAGGGATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCa                                                               <  1:113948/210‑1 (MQ=255)                                                                                                                                                                                                                      gATCCTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGATCAAGGAAAGTTGGACGCAATATAGGTTCGTTATCTTGATGTGCtt        >  1:717835/1‑251 (MQ=255)                                                                                                                                                                                                                         ccTTTCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGATCAAGGAAAGTTGGACGCAATATAGGTTCGTTATCTTGATGTGCTTTc      >  1:297128/1‑250 (MQ=255)                                                                                                                                                                                                                           tttCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGATCAAGGAAAGTTGGACGCAATATAGGTTCGTTATCTTGATGTGCTTTCCaa   <  1:884584/251‑1 (MQ=255)                                                                                                                                                                                                                            ttCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGATCAAGGAAAGTTGGACGCAATATAgg                            >  1:312282/1‑225 (MQ=255)                                                                                                                                                                                                                            ttCTAATGGCGTATCTACCGTGATTTTTTCGCCACCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGATCAAGGAAAGTTGGACGCAATATAGGTTCGTTATCTTGATGTGCTTTCCaaa  >  1:576328/1‑251 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                  TGTTTGGTTCGTGCATTTTAGATGAATGTGAAGCTCTAAATATTTACCTTTGAGATAATCAAAACTTTCGCCATCATCATCAAACACTGTGATATTTCTTTCTCCTTGATTAATAAAAGGCATAATTAATAATTCTCGATAATCATCAGATAATGTATTTTTATGACCTTTTCTCGCCATTGGAATGACACTTCCAGCTCTTAAAAATAAAGGGATCCTTTCTAATGGTGTATCTACCGTGATTTTTTCGCCGCCATTAAACCATTTATGAGTGTAAAAGTCATACCAGCCTGCAAAATTTTGTGGAAGATAAACATCCCGTACTCTTTGATTTGGTTCTACCACAGATGCGACTAATAAATCTTCACCAAGAAGATAATCATCATTTTCTGCAAATGTGTTTTTATCATGTTCATGATCAAGGAAAGTTGGACGCAATATAGGTTCGTTATCTTGATGTGCTTTCCAAA  >  1/1065521‑1065990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑