Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,041,066 T→C intergenic (+143/+18398) unknown → / ← unknown tRNA‑Trp‑CCA/tRNA‑Ser‑GGA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,041,0660TC100.0% 204.9 / NA 71intergenic (+143/+18398)unknown/unknowntRNA‑Trp‑CCA/tRNA‑Ser‑GGA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/35);  total (36/35)

TGTAACCTTTTCAGGTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTAAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATATTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGCCAACGGGCACGTCCGTAAAGGTAG  >  1/1040819‑1041311
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     
tGTAACCTTTTCAGGTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGc                                                                                                                                                                                                                                                    <  1:607408/251‑1 (MQ=255)
tGTAACCTTTTCAGGTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGc                                                                                                                                                                                                                                                    <  1:160146/251‑1 (MQ=255)
tGTAACCTTTTCAGGTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGc                                                                                                                                                                                                                                                    <  1:379587/251‑1 (MQ=255)
  tAACCTTTTCAGGTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGcac                                                                                                                                                                                                                                                  <  1:895590/251‑1 (MQ=255)
       ttttCAGGTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATCTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGt                                                                                                                                                                                                                                             <  1:881432/251‑1 (MQ=255)
            aGGTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGcac                                                                                                                                                                                                                                                  >  1:32587/1‑241 (MQ=255)
             ggTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCGTCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAAt                                                                                                                                                                                                                                       >  1:413248/1‑251 (MQ=255)
             ggTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAg                                                                                                                                                                                                                                                >  1:465185/1‑242 (MQ=255)
              gTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTTCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTaaa                                                                                                                                                                                                                                        <  1:456053/249‑1 (MQ=255)
              gTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAAt                                                                                                                                                                                                                                       >  1:688894/1‑250 (MQ=255)
              gTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAAt                                                                                                                                                                                                                                       <  1:607186/250‑1 (MQ=255)
              gTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAAt                                                                                                                                                                                                                                       <  1:494588/250‑1 (MQ=255)
              gTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAAt                                                                                                                                                                                                                                       <  1:882174/250‑1 (MQ=255)
                tataCATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGc                                                                                                                                                                                                                                                    >  1:45842/1‑235 (MQ=255)
                 atacatacCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGc                                                                                                                                                                                                                                                    <  1:114644/234‑1 (MQ=255)
                 atacatacCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAAt                                                                                                                                                                                                                                       >  1:643098/1‑247 (MQ=255)
                      tacCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGcac                                                                                                                                                                                                                                                  >  1:547344/1‑231 (MQ=255)
                      tacCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGcac                                                                                                                                                                                                                                                  >  1:735932/1‑231 (MQ=255)
                      tacCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGc                                                                                                                                                                                                                                                    >  1:732301/1‑229 (MQ=255)
                      tacCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAAc                                                                                                                                                                                                                               >  1:631181/1‑250 (MQ=255)
                      tacCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAAc                                                                                                                                                                                                                               >  1:821521/1‑250 (MQ=255)
                                ggCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAAt                                                                                                                                                                                                                    >  1:688874/1‑251 (MQ=255)
                                      gTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCt                                                                                                                                                                                                               >  1:132504/1‑250 (MQ=255)
                                          aaTTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCt                                                                                                                                                                                                               <  1:280074/246‑1 (MQ=255)
                                               gTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGc                                                                                                                                                                                                                                                    <  1:173794/204‑1 (MQ=255)
                                                   agCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTataat                                                                                                                                                                                                   <  1:348031/249‑1 (MQ=255)
                                                     cACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTAtaataa                                                                                                                                                                                                 <  1:311235/249‑1 (MQ=255)
                                                     cACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTAtaataa                                                                                                                                                                                                 <  1:629780/249‑1 (MQ=255)
                                                                       ggTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAAttt                                                                                                                                                                                                                  <  1:551990/214‑1 (MQ=255)
                                                                       ggTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACg                                                                                                                                                                                               <  1:585281/233‑1 (MQ=255)
                                                                         tgtTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAAttt                                                                                                                                                                                                                  >  1:852937/1‑212 (MQ=255)
                                                                          gtTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGcac                                                                                                                                                                                                                                                  <  1:335815/179‑1 (MQ=255)
                                                                          gtTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGc                                                                                                                                                                                                                                                    <  1:730421/177‑1 (MQ=255)
                                                                                 gTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGc                                                                                                                                                                                                                                                    <  1:711783/170‑1 (MQ=255)
                                                                                  ttCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGAtt                                                                                                                                                                   >  1:120143/1‑250 (MQ=255)
                                                                                                     gCCATTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGa                                                                                                                                               >  1:82699/1‑251 (MQ=255)
                                                                                                        aTTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATg                                                                                                                                                                                    <  1:726918/211‑1 (MQ=255)
                                                                                                        aTTTACTTCATCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGt                                                                                                                                                          <  1:582428/237‑1 (MQ=255)
                                                                                                                 aTCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTat                                                                                                                                                                                 >  1:135728/1‑205 (MQ=255)
                                                                                                                 aTCCTGAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATCTGCTCCTAGGTATAATAACGAatatat                                                                                                                                                                                        <  1:823751/198‑1 (MQ=255)
                                                                                                                        aCTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGaa                                                                                                                            >  1:107036/1‑251 (MQ=255)
                                                                                                                                                 aaaTCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTAtaataa                                                                                                                                                                                                 <  1:314055/157‑1 (MQ=255)
                                                                                                                                                   aTCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTc                                                                                                                                                                        <  1:199607/180‑1 (MQ=255)
                                                                                                                                                            cTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGtctc                                                                                         >  1:677227/1‑250 (MQ=255)
                                                                                                                                                                   aaaGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCg                                                                                 >  1:193227/1‑251 (MQ=255)
                                                                                                                                                                           cTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGGCAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAAt                                                                                                                                                                                                                                       <  1:520001/93‑1 (MQ=255)
                                                                                                                                                                                cTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTatcatc                                                                                                                                                                             <  1:401742/146‑1 (MQ=255)
                                                                                                                                                                                cTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAAcc                                                                                              >  1:390909/1‑225 (MQ=255)
                                                                                                                                                                                            aTTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGc                                                        <  1:99957/251‑1 (MQ=255)
                                                                                                                                                                                             ttAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCg                                                       >  1:698361/1‑251 (MQ=255)
                                                                                                                                                                                                     gTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTa                                               >  1:689236/1‑251 (MQ=255)
                                                                                                                                                                                                               ccccAAAAGTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGAt                                                                  >  1:162044/1‑222 (MQ=255)
                                                                                                                                                                                                                       gTTGGACAGATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTa                             >  1:8148/1‑251 (MQ=255)
                                                                                                                                                                                                                               gATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAatatat                                                                                                                                                                                        >  1:666857/1‑88 (MQ=255)
                                                                                                                                                                                                                               gATAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGc                          <  1:538852/246‑1 (MQ=255)
                                                                                                                                                                                                                                 tAACTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGCCAACggg                   >  1:28075/1‑251 (MQ=255)
                                                                                                                                                                                                                                   aCTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTc                                                                       <  1:681559/197‑1 (MQ=255)
                                                                                                                                                                                                                                   aCTAAATATTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAAc                                   <  1:608816/233‑1 (MQ=255)
                                                                                                                                                                                                                                          atTGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATcc                                                                                                                                                                            >  1:532028/1‑89 (MQ=255)
                                                                                                                                                                                                                                            tGAGCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGCCAACGGGCACGTCCGTaa        <  1:655301/251‑1 (MQ=255)
                                                                                                                                                                                                                                               gCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCTATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGCCAACGGGCACGTCCGTAAAgg     >  1:81065/1‑251 (MQ=255)
                                                                                                                                                                                                                                               gCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACAt                                 >  1:305015/1‑223 (MQ=255)
                                                                                                                                                                                                                                               gCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGCCAACggg                   >  1:664299/1‑237 (MQ=255)
                                                                                                                                                                                                                                               gCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGCCAACGGGCACGTCCGTaa        >  1:411085/1‑248 (MQ=255)
                                                                                                                                                                                                                                               gCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGCCAACGGGCACGTCCGTAAAgg     >  1:270053/1‑251 (MQ=255)
                                                                                                                                                                                                                                               gCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGCCAACGGGCACGTCCGTAAAgg     >  1:796348/1‑251 (MQ=255)
                                                                                                                                                                                                                                               gCTCTATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGCCAACGGGCACGTCCGTAAAgg     >  1:720488/1‑251 (MQ=255)
                                                                                                                                                                                                                                                ctctATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGCCAACGGGCACGTCCGTAAAGGt    <  1:556720/251‑1 (MQ=255)
                                                                                                                                                                                                                                                  ctATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTat                                                                                                                                                                                 <  1:148192/76‑1 (MQ=255)
                                                                                                                                                                                                                                                  ctATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGAt                                                                  <  1:739875/187‑1 (MQ=255)
                                                                                                                                                                                                                                                  ctATACTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGCCAACGGGCACGTCCGTAAAGGTAg  >  1:470329/1‑251 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     
TGTAACCTTTTCAGGTTATACATACCAATAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCATTTACTTCATCCTAAACTGAAAATTGTCTCTATCCGTTTTAAATCTAATTTCTTTAAAAAAGAAAACTGTACTTTAAAATCAGATTAAAAAAGTGATTTGAGCCCCAAAAGTTGGACAGATAACTAAATATTGAGCTCTATATTGCACAGGGTTTAAATCGTCTAACCCGAGCTTAATTTGCTCCTAGGTATAATAACGAATATATCATGTATCATCCATTCTGATTCATCAATGTCCTTAAACTGACGGTAATCAACGTGCTGAAAAAACTCTTTATCACCGCATTATCATAACCGTCTCCTCCGTCGGCCCATGTTCTGGATGGCATAAGGCGAACCGTTATCCCGTATCAACATCTTACGCCAACGGGCACGTCCGTAAAGGTAG  >  1/1040819‑1041311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑