Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,007,331	G→A	intergenic (‑875/‑27888)	unknown ← / → unknown	tRNA‑Gly‑GCC/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,007,331	0	G	A	100.0%	146.5 / NA	54	intergenic (‑875/‑27888)	unknown/unknown	tRNA‑Gly‑GCC/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (23/31);  total (23/31)

CAATCAAAGGGGAGGTAGAAAGCGATGATAAAGAAAGGAATTAAAATAATCCGAAATAGCGTCAGAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAGTAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACGCCACCATTAATC  >  1/1007086‑1007576                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                      cAATCAAAGGGGAGGTAGAAAGCGATGATAAAGAAAGGAATTAAAATAATCCGAAATAGCGTCAGAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAatt                                                                                                                                                                                                                                                  >  1:114932/1‑251 (MQ=255)              ggTAGAAAGCGATGATAAAGAAAGGAATTAAAATAATCCGAAATAGCGTCAGAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGc                                                                                                                                                                                                                                      >  1:459002/1‑250 (MQ=255)              ggTAGAAAGCGATGATAAAGAAAGGAATTAAAATAATCCGAAATAGCGTCAGAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAAGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGc                                                                                                                                                                                                                                      >  1:424448/1‑250 (MQ=255)               gTAGAAAGCGATGATAAAGAAAGGAATTAAAATAATCCGAAATAGCGTCAGAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCa                                                                                                                                                                                                                                    >  1:94296/1‑251 (MQ=255)                   aaaGCGATGATAAAGAAAGGAATTAAAATAATCCGAAATAGCGTCAGAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCagag                                                                                                                                                                                                                                 <  1:876192/250‑1 (MQ=255)                            atAAAGAAAGGAATTAAAATAATCCGAAATAGCGTCAGAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCt                                                                                                                                                                                                                        <  1:737042/250‑1 (MQ=255)                                        aTTAAAATAATCCGAAATAGCGTCAGAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTa                                                                                                                                                                                                           >  1:57462/1‑251 (MQ=255)                                                 atCCGAAATAGCGTCAGAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGc                                                                                                                                                                                                                                           <  1:312769/210‑1 (MQ=255)                                                 atCCGAAATAGCGTCAGAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTa                                                                                                                                                                                                  >  1:568513/1‑251 (MQ=255)                                                 atCCGAAATAGCGTCAGAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTa                                                                                                                                                                                                  >  1:280763/1‑251 (MQ=255)                                                                 gAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCa                                                                                                                                                                                  >  1:338506/1‑251 (MQ=255)                                                                                      tCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAgg                                                                                                                                                             <  1:451955/251‑1 (MQ=255)                                                                                           ggATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGAct                                                                                                                                                          >  1:715398/1‑249 (MQ=255)                                                                                                gCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTc                                                                                                                                                                           <  1:702306/227‑1 (MQ=255)                                                                                                gCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGAc                                                                                                                                                           <  1:770667/243‑1 (MQ=255)                                                                                                gCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTcc                                                                                                                                                      <  1:716077/248‑1 (MQ=255)                                                                                                gCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGC‑AAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGt                                                                                                                                                  >  1:610267/1‑251 (MQ=255)                                                                                                                             ttGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGAc                                                                                                                                                           <  1:786749/214‑1 (MQ=255)                                                                                                                                tAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCg                                                                                                                    <  1:845113/250‑1 (MQ=255)                                                                                                                                   aTCAGATTATGCCTTGTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCa                                                                                                                <  1:637795/251‑1 (MQ=255)                                                                                                                                       gATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGAc                                                                                                                                                           >  1:762114/1‑204 (MQ=255)                                                                                                                                                            tAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATAcc                                                                                       <  1:532397/251‑1 (MQ=255)                                                                                                                                                                      aaaTTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCg                                                                             >  1:822062/1‑251 (MQ=255)                                                                                                                                                                                  aaaaaGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCCCCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGgtag                                                                 <  1:612897/251‑1 (MQ=255)                                                                                                                                                                                     aaGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTAc                                                              <  1:396999/251‑1 (MQ=255)                                                                                                                                                                                     aaGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTAc                                                              <  1:446272/251‑1 (MQ=255)                                                                                                                                                                                     aaGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTAc                                                              <  1:145904/251‑1 (MQ=255)                                                                                                                                                                                               ttATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCtt                                                     >  1:781717/1‑250 (MQ=255)                                                                                                                                                                                                      aCCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCg                                                <  1:111042/248‑1 (MQ=255)                                                                                                                                                                                                         ggATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGActc                                                                                                                                                         >  1:134545/1‑140 (MQ=255)                                                                                                                                                                                                          gATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGAc                                                                                                                                                           <  1:290316/137‑1 (MQ=255)                                                                                                                                                                                                          gATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATAc                                                                                        >  1:541701/1‑204 (MQ=255)                                                                                                                                                                                                               gCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACaa                                                            >  1:373318/1‑227 (MQ=255)                                                                                                                                                                                                               gCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGAt                                    >  1:107503/1‑251 (MQ=255)                                                                                                                                                                                                                 gTTAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTAc                                                              >  1:11602/1‑223 (MQ=255)                                                                                                                                                                                                                  ttAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACg                                                                                              >  1:720234/1‑190 (MQ=255)                                                                                                                                                                                                                  ttAATATGCTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCa                                                                          <  1:15769/210‑1 (MQ=255)                                                                                                                                                                                                                          cTTGTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGAc                                                                                                                                                           <  1:145408/121‑1 (MQ=255)                                                                                                                                                                                                                             gTCAACTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTc                                                                                                                 <  1:437372/160‑1 (MQ=255)                                                                                                                                                                                                                                  cTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTAc                                                              >  1:527627/1‑206 (MQ=255)                                                                                                                                                                                                                                  cTTATGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAac                 <  1:37038/251‑1 (MQ=255)                                                                                                                                                                                                                                     aTGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAgt                                                                                                                                                                                                                                >  1:429705/1‑41 (MQ=255)                                                                                                                                                                                                                                     aTGTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACg              >  1:531775/1‑251 (MQ=255)                                                                                                                                                                                                                                       gTATAAATCATCAAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTaaaa                                                                                                                                                                                                        >  1:879698/1‑63 (MQ=255)                                                                                                                                                                                                                                              tcatcaAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACGCCACCATTa     <  1:571101/251‑1 (MQ=255)                                                                                                                                                                                                                                                atcaAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACGCCACCATTAAt   <  1:287072/251‑1 (MQ=255)                                                                                                                                                                                                                                                atcaAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACGCCACCATTAAt   <  1:813827/251‑1 (MQ=255)                                                                                                                                                                                                                                                atcaAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACGCCACCATTAAt   <  1:261170/251‑1 (MQ=255)                                                                                                                                                                                                                                                atcaAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACGCCACCATTAAt   <  1:284429/251‑1 (MQ=255)                                                                                                                                                                                                                                                atcaAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACGCCACCATTAAt   <  1:467213/251‑1 (MQ=255)                                                                                                                                                                                                                                                atcaAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACGCCACCATTAAt   <  1:528009/251‑1 (MQ=255)                                                                                                                                                                                                                                                 tcaAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACGCCACCATTAATc  <  1:268172/251‑1 (MQ=255)                                                                                                                                                                                                                                                 tcaAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACGCCACCATTAATc  <  1:139582/251‑1 (MQ=255)                                                                                                                                                                                                                                                  caAAATAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACGCCACCATTAATc  <  1:576490/250‑1 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                      CAATCAAAGGGGAGGTAGAAAGCGATGATAAAGAAAGGAATTAAAATAATCCGAAATAGCGTCAGAAAAATGGGGATGTTAAATTTCATAGGATTGCTTTAGGTTGCCATTGATTGGAGAGTTATTGTAAATCAGATTATGCCTTTTTTAAATGGTAATTTCGTAAAATTTTGTCGCAAAAAGGGTTTTGTTATCAGACCGGATTAGCGTTAATATGCTTGTCAACTTATGTATAAATCATCAAAGTAATTTATTTGCTCCGCCAGAGTTGTTAGCTATGCCAACGTTTAAAAAATGTAAATTTTGGTGACCGCACTTTTTCTTTGATTTTATAGGACTCTCCATGTCAAAAAAATTCTCTTTAGCCACCACATTCGTTCATGCCGGCAGAAAAAAACGTTATACCCACGGTTCCGTCAATCCGGTAGTACAACGCGCTTCATCGTTGGTATTTGATTCTTTAGCGGATAAGAAACACGCCACCATTAATC  >  1/1007086‑1007576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑