| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 997,229 | T→G | intergenic (+46655/+8936) | unknown → / ← unknown | tRNA‑Leu‑CAG/tRNA‑Lys‑TTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 997,229 | 0 | T | G | 100.0% | 196.6 / NA | 71 | intergenic (+46655/+8936) | unknown/unknown | tRNA‑Leu‑CAG/tRNA‑Lys‑TTT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (39/32); total (39/32) | |||||||||||
TGCCAAGGGCGTGGACGGGTGAAAACCGTGGAAACCGTGTGCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTTATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCTTAAATGATGACGCGGAAACGTCAATCCGA > 1/996984‑997474 | tGCCAAGGGCGTGGACGGGTGAAAACCGTGGAAACCGTGTGCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTa > 1:236664/1‑251 (MQ=255)tGCCAAGGGCGTGGACGGGTGAAAACCGTGGAAACCGTGTGCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTa > 1:282666/1‑251 (MQ=255) ccAAGGGCGTGGACGGGTGAAAACCGTGGAAACCGTGTGCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAg < 1:797286/250‑1 (MQ=255) cGTGGACGGGTGAAAACCGTGGAAACCGTGTGCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGAc < 1:524374/250‑1 (MQ=255) cGGGTGAAAACCGTGGAAACCGTGTGCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTaa < 1:322011/251‑1 (MQ=255) ggTGAAAACCGTGGAAACCGTGTGCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCACCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCGAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTaaaa > 1:438192/1‑251 (MQ=255) tGAAAACCGTGGAAACCGTGTGCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGTCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAg < 1:594483/250‑1 (MQ=255) ccGTGGAAACCGTGTGCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTg > 1:92088/1‑251 (MQ=255) ccGTGGAAACCGTGTGCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTg > 1:105203/1‑251 (MQ=255) gtgCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGGGATGTAGCCTTGACGATGTAAAAGTg > 1:327116/1‑233 (MQ=255) gCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTTATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGtt > 1:602041/1‑251 (MQ=255) cTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGttt > 1:822292/1‑251 (MQ=255) cTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTGTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGAt < 1:520490/238‑1 (MQ=255) cgcgAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGgag < 1:266511/251‑1 (MQ=255) tCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTaaaa < 1:116472/251‑1 (MQ=255) cgcgTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAgg < 1:863596/231‑1 (MQ=255) cgcgTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTaaaaa > 1:268881/1‑251 (MQ=255) cgcgTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTaaaaa > 1:601091/1‑251 (MQ=255) cgcgTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTaaaaa > 1:617363/1‑251 (MQ=255) cgcgTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTaaaaa > 1:723694/1‑251 (MQ=255) cgTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAac < 1:298225/251‑1 (MQ=255) tACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAacac < 1:546688/251‑1 (MQ=255) aTGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGCGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTATGTCGTGGAGAGGCATTAAAAAACACTGACaa > 1:397087/1‑251 (MQ=255) gCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGgag < 1:425566/217‑1 (MQ=255) cAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTc > 1:673929/1‑250 (MQ=255) aTTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACg < 1:769803/165‑1 (MQ=255) aTTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGt > 1:853115/1‑251 (MQ=255) gTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACttttacatcgtcaa > 1:753416/1‑240 (MQ=255) aTGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTaaaa < 1:234990/210‑1 (MQ=255) ccGTCGCCGATTATCTGGTTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCGGAAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTa < 1:206967/251‑1 (MQ=255) gATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTg > 1:723184/1‑145 (MQ=255) gATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGACGCtt > 1:110744/1‑251 (MQ=255) aTCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATg < 1:33511/251‑1 (MQ=255) aTCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATg < 1:298797/251‑1 (MQ=255) aaCGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGAc < 1:72088/251‑1 (MQ=255) aaCGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGAc < 1:793699/251‑1 (MQ=255) aTCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGcc > 1:565180/1‑250 (MQ=255) tCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCg > 1:808652/1‑251 (MQ=255) cGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAg < 1:522490/117‑1 (MQ=255) cGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTtg < 1:858099/251‑1 (MQ=255) cTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTtgcg < 1:367086/250‑1 (MQ=255) ttACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTtgcgtg > 1:134499/1‑251 (MQ=255) gAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAgg > 1:431025/1‑196 (MQ=255) gAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATg > 1:494387/1‑216 (MQ=255) aaCTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCg > 1:72011/1‑120 (MQ=255) aaGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGAttt < 1:858772/251‑1 (MQ=255) aaacaaaTCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAAt > 1:832876/1‑251 (MQ=255) aGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGa > 1:180547/1‑251 (MQ=255) aaaaCTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTc < 1:495494/251‑1 (MQ=255) aCTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGgag > 1:407961/1‑159 (MQ=255) cTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGa > 1:39931/1‑251 (MQ=255) gtgtTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGaa < 1:88982/239‑1 (MQ=255) tgtTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCAt < 1:694198/249‑1 (MQ=255) gtTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATcc < 1:632546/120‑1 (MQ=255) gtTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCAc < 1:736952/127‑1 (MQ=255) gtTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGAcc > 1:507620/1‑178 (MQ=255) gtTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACt < 1:741303/239‑1 (MQ=255) gtTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCtt > 1:106326/1‑251 (MQ=255) gtTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCtt > 1:561870/1‑251 (MQ=255) gtTTTATACTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCtt > 1:415242/1‑251 (MQ=255) ataCTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCTTAAatg < 1:131294/251‑1 (MQ=255) ataCTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCTTAAatg < 1:409850/251‑1 (MQ=255) aCTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCTTaaa > 1:395417/1‑247 (MQ=255) cTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCTTAAatg > 1:469630/1‑248 (MQ=255) cTCAGGAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCTTAAat < 1:331750/247‑1 (MQ=255) gAACAGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCTTAAATGATGAcg < 1:751265/249‑1 (MQ=255) aGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGAc > 1:647857/1‑160 (MQ=255) aGTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCTTAAATGATGACGCGGaaa > 1:834005/1‑251 (MQ=255) gTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGgaga > 1:239680/1‑134 (MQ=255) gTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCTTAAat > 1:517358/1‑237 (MQ=255) gTTTGATGTGGTGGTGATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCTTAAATGATGACGCGGaaa > 1:555184/1‑250 (MQ=255) gtggtgATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGc < 1:883192/135‑1 (MQ=255) gtggtgATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCg > 1:305159/1‑204 (MQ=255) gtggtgATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCTTAAATGATGACGCGGAAACGCCAATCCGa > 1:238040/1‑251 (MQ=255) | TGCCAAGGGCGTGGACGGGTGAAAACCGTGGAAACCGTGTGCTATGAAATCATGCGCGAAATCATTCGCGTACACCATGTATTTGCCAGCGAACAATTCGTGGTTTATGCCTCTCACGCCGTCGCCGATTATCTGATTAACGAAGAATCCCACGGCTTACTGGCTGAACTGGAAGTGTTCATCGGCAAACAAATCCAAGTAAAAACTGAAGTGTTTTATACTCAGGAACAGTTTGATGTGGTGGTTATGTAGCCTTGACGATGTAAAAGTGCGGTGGATTTTGCCGGCGTTTTTAGGTCGTGGAGAGGCATTAAAAAACACTGCCAAAATCCACCGCACTTTCCGTGAAAACCAACAAAGGAGATCTTATGAAGCTTTATGTTTACGACCATTGCCCGTTTTGCGTGCGCGCCCGCATGATTTTCGGCTTGAAAAATGTTCCCGTTGAACTCGTGACCATCTTAAATGATGACGCGGAAACGTCAATCCGA > 1/996984‑997474 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |