| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 989,227 | T→C | intergenic (+38653/+16938) | unknown → / ← unknown | tRNA‑Leu‑CAG/tRNA‑Lys‑TTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 989,227 | 0 | T | C | 100.0% | 246.0 / NA | 86 | intergenic (+38653/+16938) | unknown/unknown | tRNA‑Leu‑CAG/tRNA‑Lys‑TTT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (43/43); total (43/43) | |||||||||||
CGAAATCAATGAAATCCAAACGGCGATCCAGTTCCGATTTCACCCGATTTTTTACTTCTGTATCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCTAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATATTTTTCTTGTCGGGCGTCTGTTCCTGCGCCAGCTCTTCGTC > 1/988989‑989466 | cGAAATCAATGAAATCCAAACGGCGATCCAGTTCCGATTTCACCCGATTTTTTACTTCTGTATCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACttt < 1:642626/250‑1 (MQ=255) cGGCGATCCAGTTCCGATTTCACCCGATTTTTTACTTCTGTATCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTAGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTAc > 1:817197/1‑227 (MQ=255) gCGATCCAGTTCCGATTTCACCCGATTTTTTACTTCTGTATCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCcggcgg > 1:604638/1‑251 (MQ=255) aTCCAGTTCCGATTTCACCCGATTTTTTACTTCTGTATCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGgtgt > 1:427391/1‑251 (MQ=255) gTTCCGATTTCACCCGATTTTTTACTTCTGTATCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGAtt > 1:69751/1‑251 (MQ=255) ttttACTTCTGTATCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGt < 1:630335/251‑1 (MQ=255) tATCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATg > 1:80450/1‑251 (MQ=255) aTCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGc > 1:599803/1‑191 (MQ=255) aTCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTacgca < 1:619848/203‑1 (MQ=255) aTCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTacgca > 1:606100/1‑203 (MQ=255) aTCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAAt < 1:375202/230‑1 (MQ=255) aTCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATgg > 1:501368/1‑251 (MQ=255) aTCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATgg > 1:210807/1‑251 (MQ=255) aTCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATgg > 1:626392/1‑251 (MQ=255) aTCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATgg > 1:619825/1‑251 (MQ=255) tCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATggg < 1:541994/251‑1 (MQ=255) tCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATggg < 1:654514/251‑1 (MQ=255) cAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGGGTTCGCGCGCGTCGAGGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTGTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTGACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGaa < 1:421455/251‑1 (MQ=255) cGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATaa < 1:668246/251‑1 (MQ=255) gTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGt > 1:117501/1‑175 (MQ=255) gTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATaaa > 1:813241/1‑251 (MQ=255) tCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATaaa < 1:722146/250‑1 (MQ=255) tCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATaaa < 1:536371/250‑1 (MQ=255) cATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAggg < 1:515346/211‑1 (MQ=255) atttatttACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATg > 1:899770/1‑248 (MQ=255) tttatttaCCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATg < 1:416060/247‑1 (MQ=255) atttaCCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAggg > 1:159754/1‑206 (MQ=255) aCCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGggt < 1:653333/251‑1 (MQ=255) aCGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGc > 1:771153/1‑238 (MQ=255) agcgagcgCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGCTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGc < 1:194649/229‑1 (MQ=255) ccGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAAc < 1:501439/251‑1 (MQ=255) ccGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAAc < 1:619430/251‑1 (MQ=255) ccGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAAc < 1:670363/251‑1 (MQ=255) ccGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAAc < 1:169908/251‑1 (MQ=255) cGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTAc < 1:561868/250‑1 (MQ=255) gTTTAAAATAAAGCTGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATcc < 1:428379/184‑1 (MQ=255) gTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATaaa < 1:422277/212‑1 (MQ=255) tAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCAcgc < 1:477057/251‑1 (MQ=255) tAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCAcgc < 1:854185/251‑1 (MQ=255) tAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCAcgc < 1:180155/251‑1 (MQ=255) aaaTAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGa > 1:336895/1‑251 (MQ=255) gCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCg > 1:222765/1‑250 (MQ=255) ccGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGcc < 1:825043/251‑1 (MQ=255) ccGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGcc < 1:329514/251‑1 (MQ=255) ccGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGcc < 1:373231/251‑1 (MQ=255) gggATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTAc > 1:760687/1‑118 (MQ=255) tAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGt < 1:400843/251‑1 (MQ=255) aTCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAAt > 1:388767/1‑155 (MQ=255) aTCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATggg < 1:620365/177‑1 (MQ=255) aTCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCAcgc > 1:621572/1‑227 (MQ=255) aTCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTgg > 1:467179/1‑251 (MQ=255) aTCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTgg > 1:652931/1‑251 (MQ=255) ccTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAATGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTc < 1:449377/251‑1 (MQ=255) gATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGttt > 1:542934/1‑118 (MQ=255) gATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATcc < 1:485760/152‑1 (MQ=255) tCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAg < 1:201847/140‑1 (MQ=255) gagaTGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATcc > 1:79691/1‑147 (MQ=255) gagaTGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGa < 1:427686/219‑1 (MQ=255) aTGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGAtt < 1:402686/250‑1 (MQ=255) ttttCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTAcc < 1:429242/251‑1 (MQ=255) cagcagCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTAc > 1:695980/1‑186 (MQ=255) gcaCCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGACGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCg > 1:392893/1‑251 (MQ=255) caccacATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGggt > 1:325490/1‑156 (MQ=255) ccacATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCggg > 1:661601/1‑233 (MQ=255) ccacATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATgg > 1:507987/1‑246 (MQ=255) ccacATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCATAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGAtt > 1:429536/1‑251 (MQ=255) caTTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCa < 1:860720/177‑1 (MQ=255) caTTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGAtt > 1:41437/1‑216 (MQ=255) caTTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTg > 1:157556/1‑251 (MQ=255) ttGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATgg < 1:523405/241‑1 (MQ=255) cATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATAttt > 1:66424/1‑251 (MQ=255) aTCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGc > 1:85912/1‑62 (MQ=255) aTCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATAtttt > 1:192210/1‑251 (MQ=255) ccTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACACGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATAttttt > 1:452342/1‑250 (MQ=255) cTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATAttttt > 1:514166/1‑249 (MQ=255) gAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATATTTTTc < 1:693432/248‑1 (MQ=255) gggTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATATTTTTCTTGTCGGGCGt > 1:141291/1‑247 (MQ=255) ggTTTTGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATATTTTTCTTGTCGGGCGTCTGt < 1:786657/250‑1 (MQ=255) ttttGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATATTTTTCTTGTCGGGCGTCTGTTcc < 1:58877/251‑1 (MQ=255) tttGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGaa > 1:699727/1‑104 (MQ=255) tttGATAACGGAGAATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATATTTTTCTTGTCGGGCGTCTGTTc > 1:162644/1‑249 (MQ=255) gaATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAAt < 1:895478/201‑1 (MQ=255) gaATTTTTCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATATTTTTCTTGTCGGGCGTCTGTTCCTGCGCCAGCTCtt > 1:54394/1‑251 (MQ=255) tttttCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGt < 1:658333/158‑1 (MQ=255) tttttCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATATTTTTCTTGTCGGGCGTCTGTTCCTGCGCCAGCTCTTCGt > 1:357449/1‑251 (MQ=255) ttttCCACCGCCAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATATTTTTCTTGTCGGGCGTCTGTTCCTGCGCCAGCTCTTCGTc < 1:883143/251‑1 (MQ=255) | CGAAATCAATGAAATCCAAACGGCGATCCAGTTCCGATTTCACCCGATTTTTTACTTCTGTATCCAAACCGTCCCATTTATTTACCACGATAACCAGCGAGCGCCCGGCGTTTAAAATAAAGCCGAGCAGGGATAAATCCTGATCAGAGATGTTTTCGCGCGCGTCGATGACCAGCAGCACCACATTGGCATCCTGAATGGCTTGCAGGGTTTTGATAACGGAGAATTTTTCCACCGCTAAATGTACTTTGCCCCGTTTACGCACGCCGGCGGTGTCGATTAGGGTGTAATCCTGATTGTCGCGTTCCATGGGAATATAAATGCTGTCGCGGGTGGTGCCAGGCAAGTCGTAAACTACCACGCGATCTTCGCCTAAAATGCGGTTGGTCAGCGTGGATTTACCGACGTTCGGGCGCCCTACAATGGCGATTTTGATATTTTTCTTGTCGGGCGTCTGTTCCTGCGCCAGCTCTTCGTC > 1/988989‑989466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |