| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 955,182 | T→C | intergenic (+4608/+50983) | unknown → / ← unknown | tRNA‑Leu‑CAG/tRNA‑Lys‑TTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 955,182 | 0 | T | C | 100.0% | 234.4 / NA | 86 | intergenic (+4608/+50983) | unknown/unknown | tRNA‑Leu‑CAG/tRNA‑Lys‑TTT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (38/48); total (38/48) | |||||||||||
CCGCTTTCAGTGCTTTGGCGTCCATCGGCAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGTACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGACTTATTACGATGGAGCGCGTTTCCCGACGCGTGCCTTCATTTTCTTATTTTTTATCAGCGCGCGTCAGAAGGCG > 1/954939‑955424 | ccGCTTTCAGTGCTTTGGCGTCCATCGGCAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACgcgc < 1:871634/250‑1 (MQ=255) cTTTCAGTGCTTTGGCGTCCATCGGCAACACAAAAAACGCTGCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTcc < 1:618448/251‑1 (MQ=255) tttCAGTGCTTTGGCGTCCATCGGCAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTccc < 1:70745/251‑1 (MQ=255) tGCTTTGGCGTCCATCGGCAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCcgcg < 1:837477/248‑1 (MQ=255) tGCTTTGGCGTCCATCGGCAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCgcgc < 1:886062/249‑1 (MQ=255) cGTCCATCGGCAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGc < 1:413251/251‑1 (MQ=255) cGTCCATCGGCAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGc < 1:764265/251‑1 (MQ=255) cGTCCATCGGCAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGc < 1:243283/251‑1 (MQ=255) cGTCCATCGGCAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGc < 1:129512/251‑1 (MQ=255) aTCGGCAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTc < 1:828990/251‑1 (MQ=255) aTCGGCAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTc < 1:26018/251‑1 (MQ=255) cAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAggg < 1:752612/251‑1 (MQ=255) cTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTc < 1:626551/249‑1 (MQ=255) cTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCa > 1:528041/1‑251 (MQ=255) cccGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGa > 1:454395/1‑251 (MQ=255) ccGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGaa > 1:750832/1‑251 (MQ=255) gTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGaaaa > 1:873511/1‑251 (MQ=255) aCGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAggg < 1:711962/251‑1 (MQ=255) aCGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAggg < 1:842317/251‑1 (MQ=255) aaTCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTTACCGTACTGCGCCAATAGCTTTTGTTGCCGCAACGCACGCGCTTCCCGCGCCGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGata > 1:451235/1‑251 (MQ=255) aaTCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGata > 1:762194/1‑251 (MQ=255) ccGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTg < 1:339009/251‑1 (MQ=255) cGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGt < 1:435350/251‑1 (MQ=255) gTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAg < 1:740946/222‑1 (MQ=255) cTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATa < 1:593413/251‑1 (MQ=255) gcgcTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTg > 1:304703/1‑244 (MQ=255) gcgcTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATaaa > 1:869791/1‑251 (MQ=255) gcgcTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATaaa > 1:526778/1‑251 (MQ=255) gcgcTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACACGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTc > 1:438086/1‑246 (MQ=255) cTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACgcgc > 1:183047/1‑170 (MQ=255) cTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATaaaaa < 1:742437/250‑1 (MQ=255) gggTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGc > 1:533872/1‑185 (MQ=255) gATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAggg < 1:688563/191‑1 (MQ=255) gATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAgtg > 1:136122/1‑208 (MQ=255) aTGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACgcgc > 1:479958/1‑161 (MQ=255) aTGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTc > 1:309377/1‑202 (MQ=255) ggCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTaaaaa > 1:292665/1‑251 (MQ=255) cGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAg > 1:228373/1‑177 (MQ=255) cGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGt < 1:715590/222‑1 (MQ=255) aaGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATg < 1:197840/251‑1 (MQ=255) aaGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATg < 1:180761/251‑1 (MQ=255) aaGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATg < 1:308899/251‑1 (MQ=255) gTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGt > 1:826832/1‑205 (MQ=255) tttttCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGt < 1:40479/249‑1 (MQ=255) tttttCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTaa < 1:724759/251‑1 (MQ=255) tttttCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTaa < 1:541126/251‑1 (MQ=255) tttttCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTaa < 1:143923/251‑1 (MQ=255) tttttCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTa < 1:770193/250‑1 (MQ=255) ttttGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTAtt < 1:671301/251‑1 (MQ=255) gACATAATCTAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGCGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGt > 1:232357/1‑228 (MQ=255) gACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAggg > 1:269659/1‑140 (MQ=255) gACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAg > 1:547093/1‑149 (MQ=255) gACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAg < 1:592970/155‑1 (MQ=255) gACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGaaaaa < 1:93369/166‑1 (MQ=255) gACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCt < 1:774273/235‑1 (MQ=255) gACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAgtta > 1:81579/1‑248 (MQ=255) gACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAgtta > 1:100950/1‑248 (MQ=255) gACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAgtt > 1:450380/1‑247 (MQ=255) aTCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGa > 1:481753/1‑171 (MQ=255) aTCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGAc < 1:216814/201‑1 (MQ=255) aTCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACtt < 1:26359/251‑1 (MQ=255) gggCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGt > 1:548715/1‑251 (MQ=255) tttttCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAg < 1:856493/242‑1 (MQ=255) ccccGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGTTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGACttatta < 1:454073/251‑1 (MQ=255) ccGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTaaaaa > 1:533563/1‑172 (MQ=255) gCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTg < 1:548314/149‑1 (MQ=255) gCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAGTGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGACTTATTACGAt > 1:451560/1‑251 (MQ=255) cccACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGACTTATTACGAt < 1:6330/250‑1 (MQ=255) ggTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTaa > 1:198857/1‑188 (MQ=255) ggTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGACTTATTACGATGGAGCGCGt > 1:171905/1‑251 (MQ=255) tCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGACTTATTACGATGGAGCGCGtt < 1:424954/250‑1 (MQ=255) aCGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGAc > 1:452664/1‑227 (MQ=255) aCGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGACTTATTACGATGGAGCGCGTTTcc > 1:599910/1‑250 (MQ=255) aCGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAgttactg > 1:742058/1‑199 (MQ=255) aGCACCGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCATTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGTCCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGAc < 1:802353/216‑1 (MQ=255) aCGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCAcgcg < 1:185504/48‑1 (MQ=255) aCGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACgcgc < 1:414869/49‑1 (MQ=255) aCGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATg > 1:792050/1‑160 (MQ=255) tGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTc < 1:836585/85‑1 (MQ=255) gTACTGCGCCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATg < 1:249466/146‑1 (MQ=255) gcgcCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTAt < 1:61657/182‑1 (MQ=255) gcgcCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGACTTATTACGATGGAGCGCGTTTCCCGACGCGTGCCTTCATTTTCTTATTTTTTAt > 1:616428/1‑251 (MQ=255) cgcCAATAGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGACTTATTACGATGGAGCGCGTTTCCCGACGCGTGCCTTCATTTTCTTATTTTTTAt > 1:661189/1‑250 (MQ=255) aGCTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGACTTATTACGATGGAGCGCGTTTCCCGACGCGTGCCTTCATTTTCTTATTTTTTATCAgcgcg > 1:467245/1‑250 (MQ=255) cTTTTGTTGCAGCAACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTa > 1:566492/1‑142 (MQ=255) caACGCACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGACTTATTACGATGGAGCGCGTTTCCCGACGCGTGCCTTCATTTTCTTATTTTTTATCAGCGCGCGTCAGAAGgcg < 1:513820/248‑1 (MQ=255) | CCGCTTTCAGTGCTTTGGCGTCCATCGGCAACACAAAAAACGCTTCATGCCCCGTTTCCAACGGACGAATCCGTTCTGCGCTTGGGGTGATGGCTAACTGCGTAAAAAGTGCGGTGAGTTTTTCCAGCGTTTTTGCAAAGACATAATCCAGCAGGGCATTTTTTTTCACCCCGCCCACCGCGGTCAACGTGACGCAAAGCAACGTTTGACCGTACTGCGCCAATAGCTTTTGTTGCAGCAACGTACGCGCTTCCCGCGCAGATAAAAGCTGTTCAAGGGAGATTTCAGTTCCAGTGGTGGAAAAATGTTTTAGGGATATTGTCATAAAAATAACTGTAAAAATGACCGCACTTTATGAATGTTTAGTAATCGCTACTTATTTAGTTACTGTTACTTATTTTAGTAACCGTGACTTATTACGATGGAGCGCGTTTCCCGACGCGTGCCTTCATTTTCTTATTTTTTATCAGCGCGCGTCAGAAGGCG > 1/954939‑955424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |