Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 860,990 A→T intergenic (‑11333/‑61228) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Leu‑GAG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1860,9900AT100.0% 201.6 / NA 75intergenic (‑11333/‑61228)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (26/49);  total (26/49)

TAAAAATCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGTCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACGACTCGGTTACTAATAATCCGAGAACGAATGTCAGTTACAGATAAAGTAGTCAGCAGTAAGATCGTTATGACTACTAAAGTATTAATAAGCCAGTTCATTTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGAGACAGTGGTCGTTAAATCCGAGAACTTACCTGACAACGCCTTAATAAAGCTGTTATCCTCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAGCCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACTTACACGAAAAAAAGACTACTTGACGATAAAAGTAATCCAGTAAATCCATCATAATTAATTCTAATATAGAGTGTAGAATAGCTC  >  1/860747‑861223
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                         
tAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAg                                                                                                                                                                                                                                      <  1:124819/248‑1 (MQ=255)
tAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAg                                                                                                                                                                                                                                      <  1:23506/248‑1 (MQ=255)
        cGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTaaa                                                                                                                                                                                                                           <  1:287989/251‑1 (MQ=255)
         gATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAg                                                                                                                                                                                                                                      >  1:235106/1‑239 (MQ=255)
          ataataAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATc                                                                                                                                                                                                                         <  1:32452/251‑1 (MQ=255)
                 gtgtACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGaa                                                                                                                                                                                                                   >  1:508286/1‑250 (MQ=255)
                 gtgtACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGATATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGaa                                                                                                                                                                                                                   >  1:269642/1‑250 (MQ=255)
                   gtACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACtt                                                                                                                                                                                                                >  1:8210/1‑251 (MQ=255)
                      cATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTAcc                                                                                                                                                                                                             <  1:578120/251‑1 (MQ=255)
                              gggAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACac                                                                                                                                                                                                       >  1:463212/1‑248 (MQ=255)
                                gAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATc                                                                                                                                                                                                                         <  1:422692/229‑1 (MQ=255)
                                      cAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTtaatc                                                                                                                                                                                             <  1:18966/251‑2 (MQ=255)
                                      cAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTtaata                                                                                                                                                                                             <  1:156350/251‑1 (MQ=255)
                                      cAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTtaata                                                                                                                                                                                             <  1:866773/251‑1 (MQ=255)
                                              gccTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGtt                                                                                                                                                                                     >  1:252038/3‑251 (MQ=255)
                                                   atatTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATccc                                                                                                                                                                                <  1:394607/251‑2 (MQ=255)
                                                   atatTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATccc                                                                                                                                                                                <  1:104107/251‑2 (MQ=255)
                                                   atatTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCAAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATccc                                                                                                                                                                                <  1:750316/251‑2 (MQ=255)
                                                    tatTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAg                                                                                                                                                                                                                                      <  1:755739/196‑1 (MQ=255)
                                                       tttAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATcccc                                                                                                                                                                               <  1:572688/248‑3 (MQ=255)
                                                         taataaACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATc                                                                                                                                                                                                                         >  1:581467/1‑204 (MQ=255)
                                                          aataaACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTtaataa                                                                                                                                                                                            <  1:520307/232‑1 (MQ=255)
                                                          aataaACTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTaa                                                                                                                                                                         >  1:843970/1‑251 (MQ=255)
                                                             aaaCTGAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAAc                                                                                                                                                                      <  1:725234/251‑1 (MQ=255)
                                                                  gAACGGAATAATGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTgg                                                                                                                                                                                                                                   <  1:296583/185‑1 (MQ=255)
                                                                            atGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAAc                                                                                                                                                       <  1:261506/251‑1 (MQ=255)
                                                                            atGACGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAAc                                                                                                                                                       <  1:85047/251‑1 (MQ=255)
                                                                               aCGAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTtaata                                                                                                                                                                                             <  1:312297/210‑1 (MQ=255)
                                                                                 gAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAg                                                                                                                                                                                                                                      <  1:197941/167‑1 (MQ=255)
                                                                                 gAATAACAGAAACAAAACAATTCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATc                                                                                                                                                                                  <  1:367751/219‑1 (MQ=255)
                                                                                                  caattCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTtaata                                                                                                                                                                                             <  1:713371/187‑1 (MQ=255)
                                                                                                   aattCGGTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTaacc                                                                                                                                <  1:779923/248‑4 (MQ=255)
                                                                                                         gTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATa                                                                                                                            >  1:724868/1‑249 (MQ=255)
                                                                                                         gTTACTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATAc                                                                                                                           <  1:359386/250‑1 (MQ=255)
                                                                                                             cTAATAAGCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTtaata                                                                                                                                                                                             <  1:346725/180‑1 (MQ=255)
                                                                                                                ataagCCGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGGTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGa                                                                                                                   <  1:430098/251‑1 (MQ=255)
                                                                                                                  aagccGAAAACGAATGTCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAg                                                                                                                 <  1:674379/248‑1 (MQ=255)
                                                                                                                                  tCAGTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGAt                                                                                                  <  1:311721/250‑1 (MQ=255)
                                                                                                                                     gTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTtaata                                                                                                                                                                                             <  1:40865/156‑1 (MQ=255)
                                                                                                                                     gTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTtaata                                                                                                                                                                                             >  1:338289/1‑156 (MQ=255)
                                                                                                                                     gTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATccc                                                                                                                                                                                <  1:663925/169‑2 (MQ=255)
                                                                                                                                     gTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTaacc                                                                                                                                >  1:500053/1‑214 (MQ=255)
                                                                                                                                     gTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTaac                                                                                                                                 <  1:152763/216‑3 (MQ=255)
                                                                                                                                     gTTATAGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAAc                                                                                                                      >  1:462671/1‑227 (MQ=255)
                                                                                                                                         taGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATAc                                                                                                                           <  1:857845/217‑1 (MQ=255)
                                                                                                                                         taGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTaa                                                                                          >  1:291182/2‑251 (MQ=255)
                                                                                                                                          aGATAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTaaa                                                                                         >  1:858182/1‑251 (MQ=255)
                                                                                                                                            aTAAAGTAACCAGCAGCGAGAGCGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAAc                                                                                       <  1:366220/251‑1 (MQ=255)
                                                                                                                                              aaagtaaccagcagcgagagcGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAAccc                                                                                                                               >  1:663397/21‑209 (MQ=255)
                                                                                                                                                  taaccagcagcgagagcGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAAcctatac                                                                                 <  1:482912/235‑7 (MQ=255)
                                                                                                                                                     ccagcagcgagagcGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGc                                                                                                                                        <  1:215862/180‑1 (MQ=255)
                                                                                                                                                        gcagcgagagcGTTATGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGaagaa                                                                           >  1:2621/11‑248 (MQ=255)
                                                                                                                                                                      aTGATTACTAAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTtaata                                                                                                                                                                                             >  1:98709/1‑123 (MQ=255)
                                                                                                                                                                        gattactaAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTtaata                                                                                                                                                                                             >  1:193616/4‑121 (MQ=255)
                                                                                                                                                                        gattactaAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGACTACTTgatgat                                                           >  1:835872/4‑251 (MQ=255)
                                                                                                                                                                          ttactaAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATcc                                                                                                                                                                                 >  1:388005/2‑131 (MQ=255)
                                                                                                                                                                          ttactaAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTc                                                                                                     >  1:281763/2‑207 (MQ=255)
                                                                                                                                                                          ttactaAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGact                                                                     <  1:149626/238‑1 (MQ=255)
                                                                                                                                                                            actaAAGCGTTAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGACTACTTGatga                                                            <  1:190674/246‑4 (MQ=255)
                                                                                                                                                                             ctaaagcgttAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAAc                                                                                                                      <  1:583085/179‑1 (MQ=255)
                                                                                                                                                                                  gcgttAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTaacc                                                                                                                                >  1:463532/4‑169 (MQ=255)
                                                                                                                                                                                   cgttAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATTCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGACTACTTGATGATAAAAGTAATcc                                                <  1:452470/249‑1 (MQ=255)
                                                                                                                                                                                   cgttAATAAGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGACTACTTGATGATAAAAGTAATcc                                                <  1:230394/249‑1 (MQ=255)
                                                                                                                                                                                      taataaGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAAc                                                                                                                      <  1:869767/178‑1 (MQ=255)
                                                                                                                                                                                      taataaGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGACTACTTg                                                                <  1:263358/232‑1 (MQ=255)
                                                                                                                                                                                      taataaGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATAATCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGACTACTTg                                                                >  1:757379/1‑232 (MQ=255)
                                                                                                                                                                                         taaGCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGACTACTTGATGATAAAAGTAATCCAGTaaa                                          <  1:599507/251‑1 (MQ=255)
                                                                                                                                                                                            gCCAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTa                                                                                                                                   <  1:825586/159‑1 (MQ=255)
                                                                                                                                                                                             ccAGTTCA‑TTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGACTACTTGATGATAAAAGTAATCCAGTAAATc                                        <  1:886480/249‑1 (MQ=255)
                                                                                                                                                                                                             tCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGACTACTTGATGATAAAAGTAATCCAGTAAATCCATCATaattaatttca                       >  1:159307/1‑248 (MQ=255)
                                                                                                                                                                                                                            aCTTTTGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACac                                                                                                                                                                                                       <  1:107047/60‑2 (MQ=255)
                                                                                                                                                                                                                               tttGCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGACTACTTGATGATAAAAGTAATCCAGTAAATCCATCATaattaatttcaaaatgaagcaaagaatag     >  1:392439/1‑230 (MQ=255)
                                                                                                                                                                                                                                  gCTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGACTACTTGATGATAAAAGTAATCCAGTAAATCCATCATaattaatttcaaaatgaagcaaagaatagcc   >  1:62568/1‑227 (MQ=255)
                                                                                                                                                                                                                                   cTAACTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAACCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACCTATACGAAGAAAAGACTACTTGATGATAAAAGTAATCCAGTAAATCCATCATaattaatttcaaaatgaagcaaagaatagccc  <  1:880613/250‑25 (MQ=255)
                                                                                                                                                                                                                                      aCTATGGCGTCAGTGACAGTGGTCGTTAAATCCGAGAACTTACCTGACACTGCCTTAATAAAGCTGTTATCCCCGACTAAAACGGCGACTACAAAAAc                                                                                                                                                       <  1:698891/98‑1 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                         
TAAAAATCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGTCTGATATTTTAATAAACTGAACGGAATAATGACGAATAACAGAAACAAAACGACTCGGTTACTAATAATCCGAGAACGAATGTCAGTTACAGATAAAGTAGTCAGCAGTAAGATCGTTATGACTACTAAAGTATTAATAAGCCAGTTCATTTTTTTATCATTTTTCTTAGCTACTTTTGCTAACTATGGCGTCAGAGACAGTGGTCGTTAAATCCGAGAACTTACCTGACAACGCCTTAATAAAGCTGTTATCCTCGACTAAAACGGCGACTACAAAAACAGCAATAGCCACAGCAATTAGCCCATACTCAACAGAAGTAATCCCTTGTCGATTTCTGTAAAACTTACACGAAAAAAAGACTACTTGACGATAAAAGTAATCCAGTAAATCCATCATAATTAATTCTAATATAGAGTGTAGAATAGCTC  >  1/860747‑861223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑