Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 860,596 C→T intergenic (‑10939/‑61622) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Leu‑GAG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1860,5960CT100.0% 211.0 / NA 79intergenic (‑10939/‑61622)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (45/34);  total (45/34)

ATTATTGTTTGTTGATTTTCAGTATTGTCAAATGTTGGCATAAACATAATGCCACCAATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTCTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTCACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCGTCACTTGGAACGGCTAGCATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAAAGAAAACAGTAAAAATCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGTCTGATATTTTAATAAACTGAACGGAATAATGACG  >  1/860355‑860828
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                        
attattGTTTGTTGATTTTCAGTATTGTCAAATGCTGGCATAAACATAATGCCACCAATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGaaaaa                                                                                                                                                                                                                                 >  1:665856/1‑251 (MQ=255)
   attGTTTGTTGATTTTCAGTATTGTCAAATGCTGGCATAAACATAATGCCACCAATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATaa                                                                                                                                                                                                                              <  1:109763/251‑1 (MQ=255)
                     gTATTGTCAAATGCTGGCATAAACATAATGCCACCAATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAg                                                                                                                                                                                                            >  1:583586/1‑251 (MQ=255)
                       aTTGTCAAATGCTGGCATAAACATAATGCCACCAATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTc                                                                                                                                                                                                          <  1:221779/251‑1 (MQ=255)
                          gTCAAATGCTGGCATAAACATAATGCCACCAATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAGGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCa                                                                                                                                                                                                       >  1:433269/1‑251 (MQ=255)
                                         aaaCATAATGCCACCAATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAAtgttg                                                                                                                                                                                        >  1:455298/1‑251 (MQ=255)
                                              tAATGCCACCAATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAaag                                                                                                                                                                                   <  1:325555/251‑1 (MQ=255)
                                                    caccaATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAAtt                                                                                                                                                                                                              >  1:608900/1‑218 (MQ=255)
                                                      ccaATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGaagaaaaa                                                                                                                                                                           <  1:803284/251‑1 (MQ=255)
                                                                ccGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTCATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAAtt                                                                                                                                                                 >  1:456567/1‑251 (MQ=255)
                                                                ccGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAAtt                                                                                                                                                                 >  1:690115/1‑251 (MQ=255)
                                                                            gCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGAtaataa                                                                                                                                                                                                                >  1:56430/1‑192 (MQ=255)
                                                                               cTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATc                                                                                                                                                                                                    >  1:420741/1‑201 (MQ=255)
                                                                               cTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACg                                                                                                                                                  >  1:55034/1‑251 (MQ=255)
                                                                                 gAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACgg                                                                                                                                                 >  1:25454/1‑250 (MQ=255)
                                                                                   aaTGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTa                                                                                                                                              <  1:148298/251‑1 (MQ=255)
                                                                                      gATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAAtt                                                                                                                                                                                                              <  1:262210/184‑1 (MQ=255)
                                                                                      gATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAAt                                                                                                                                                                  <  1:747055/228‑1 (MQ=255)
                                                                                      gATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTaaca                                                                                                                                           >  1:400487/1‑248 (MQ=255)
                                                                                                gTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAAtt                                                                                                                                                                                                              <  1:672617/174‑1 (MQ=255)
                                                                                                     gTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGaagcaa                                                                                                                            >  1:804268/1‑251 (MQ=255)
                                                                                                             ttttttACCCTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAAtgt                                                                                                                                                                                          <  1:134818/181‑1 (MQ=255)
                                                                                                                    cccTTAATTAAATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTaa                                                                                                                                                                                     >  1:144929/1‑179 (MQ=255)
                                                                                                                       ttaattaaATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCAc                                                                                                          <  1:192442/251‑1 (MQ=255)
                                                                                                                       ttaattaaATTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCAc                                                                                                          <  1:273987/251‑1 (MQ=255)
                                                                                                                              aaTTTTAACAAAGTAAAGTTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGaa                                                                                                   >  1:659124/1‑251 (MQ=255)
                                                                                                                                        aagtaaagtTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATaacc                                                                                                                                                                                                                            <  1:898312/120‑1 (MQ=255)
                                                                                                                                          gtaaagtTTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGaaaa                                                                                       >  1:568937/1‑251 (MQ=255)
                                                                                                                                              agtttcCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAAtt                                                                                                                                                                                                              <  1:265919/124‑1 (MQ=255)
                                                                                                                                               gtttcCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCAcc                                                                                                         >  1:99456/4‑228 (MQ=255)
                                                                                                                                                          atcaaAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTcc                                                                                                                                                                                                         >  1:72512/1‑121 (MQ=255)
                                                                                                                                                              aaaTTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACAt                                                                                                                                          <  1:859464/180‑1 (MQ=255)
                                                                                                                                                                  taattTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAatat                                                                                                                   >  1:624023/1‑199 (MQ=255)
                                                                                                                                                                      ttGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACAt                                                           <  1:577784/251‑1 (MQ=255)
                                                                                                                                                                            gagCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATa                                                          >  1:281133/1‑246 (MQ=255)
                                                                                                                                                                                 aTGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAAt                                                >  1:523917/1‑251 (MQ=255)
                                                                                                                                                                                  tGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCAc                                                                                                                                    >  1:578548/1‑166 (MQ=255)
                                                                                                                                                                                   gTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTc                                                                                                                                                                                                          >  1:598559/1‑95 (MQ=255)
                                                                                                                                                                                   gTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGaaa                                                                                        <  1:690559/209‑1 (MQ=255)
                                                                                                                                                                                        tCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAg                                         >  1:760276/1‑251 (MQ=255)
                                                                                                                                                                                          aTAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGAt                                       <  1:39268/251‑1 (MQ=255)
                                                                                                                                                                                            aaaGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAg                                     <  1:718166/251‑1 (MQ=255)
                                                                                                                                                                                              aGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGaa                                                                                                                                                    <  1:618773/138‑1 (MQ=255)
                                                                                                                                                                                               gCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGACTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAgc                                    >  1:668169/1‑248 (MQ=255)
                                                                                                                                                                                                    ggCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACAtt                                                                                                                                         >  1:885175/1‑143 (MQ=255)
                                                                                                                                                                                                    ggCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAg                                                                                    <  1:884409/196‑1 (MQ=255)
                                                                                                                                                                                                    ggCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATa                                                          >  1:169970/1‑222 (MQ=255)
                                                                                                                                                                                                     gCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACAtt                                                                                                                                         >  1:624958/1‑142 (MQ=255)
                                                                                                                                                                                                     gCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCAc                                                                                                                                    <  1:102771/147‑1 (MQ=255)
                                                                                                                                                                                                     gCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTaaaaac                                                                             <  1:568390/202‑2 (MQ=255)
                                                                                                                                                                                                     gCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAg                                                                  <  1:478321/213‑1 (MQ=255)
                                                                                                                                                                                                     gCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATa                                                          >  1:605452/1‑221 (MQ=255)
                                                                                                                                                                                                          ttGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACAt                                                                                                                                          <  1:32989/136‑1 (MQ=255)
                                                                                                                                                                                                          ttGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAg                                                                                                  >  1:11944/1‑176 (MQ=255)
                                                                                                                                                                                                          ttGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACAt                                                           <  1:180612/215‑1 (MQ=255)
                                                                                                                                                                                                          ttGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAAt                                                >  1:784945/1‑226 (MQ=255)
                                                                                                                                                                                                          ttGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTtaat                       <  1:852896/251‑1 (MQ=255)
                                                                                                                                                                                                             cTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGatat                             <  1:563679/242‑1 (MQ=255)
                                                                                                                                                                                                                 gCCATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGa                >  1:656456/1‑251 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAAtt                                                                                                                                                                                                              >  1:575325/1‑60 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCGAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTtaata                      >  1:205104/1‑244 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAatat                                                                                                                   >  1:228207/1‑151 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGa                                                                                                    <  1:281136/166‑1 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAg                                                                                                  >  1:102895/1‑168 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAg                                                                  <  1:206620/200‑1 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAgg                                                       >  1:568591/1‑211 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGa                                        >  1:179622/1‑226 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGaa               >  1:127181/1‑251 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGaa               >  1:769734/1‑251 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGaa               >  1:110335/1‑251 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGaa               >  1:815895/1‑251 (MQ=255)
                                                                                                                                                                                                                  ccATAAGGCAATCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGaa               >  1:561265/1‑251 (MQ=255)
                                                                                                                                                                                                                             tCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGa    <  1:826724/251‑1 (MQ=255)
                                                                                                                                                                                                                             tCCGTTTTCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGa    <  1:827947/251‑1 (MQ=255)
                                                                                                                                                                                                                                   ttCTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAg                                                                                                  >  1:520630/1‑151 (MQ=255)
                                                                                                                                                                                                                                     cTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGAt                                       <  1:579504/208‑1 (MQ=255)
                                                                                                                                                                                                                                     cTTTAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGCCTGATATTTTAATAAACTGAACGGAATAATGACg  <  1:280236/245‑1 (MQ=255)
                                                                                                                                                                                                                                        tAATTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGataat                                                                     <  1:270233/175‑1 (MQ=255)
                                                                                                                                                                                                                                         aaTTGATTTACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCCTCACTTGGAACGGCTAACATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAGAGAAAACAGTAAAAACCCGATAATAAGTGTACATAAg                                                        >  1:874701/1‑187 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                        
ATTATTGTTTGTTGATTTTCAGTATTGTCAAATGTTGGCATAAACATAATGCCACCAATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTCTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGTTTTCTTTAATTGATTCACGGAAAAATAACCAACCGATAATAATTAGTCCCAATCCGGCAAATGTTGTAAAGAAGAAAAAAGAAAAAATTTCGTCACTTGGAACGGCTAGCATTAGCACCGAAGCAAGCTTAATATCTCCTGCACCTATGAAGTGCAAAGAAAACAGTAAAAATCCGATAATAAGTGTACATAAGGCGGGAATAACAAAGATAGTCTGATATTTTAATAAACTGAACGGAATAATGACG  >  1/860355‑860828

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑