Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 859,754 T→A intergenic (‑10097/‑62464) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Leu‑GAG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1859,7540TA100.0% 176.1 / NA 66intergenic (‑10097/‑62464)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (27/39);  total (27/39)

TGTTTGAACCAACTGGGTTGCACCTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCCCCGAGAACTGCACAGCATATTAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGGCAGGTAATATAACTAACTTTGATTCTCTATCCAGTGAATAGAATTTTTTTGCTTGTTCAGCAGTTATTTTTAGTGCTACATAACCAGCATATTCTTGATTGTTTGGAATCCCG‑TCTGCTGCCTTTTCAGCTTCAGGAGCACCTTGTTCTGTTGATTGAGTAAAGTTTCTTGCTTGTAAAACCAATACTTTACCTAAAATTTTAACTAAATCTTTACGATCATAAGTGTTGCGCGAATCTGAAGCAATTTGTTGGCTATAGATAGCAACATAGTCTCCACTTAAAATAGTATTTA  >  1/859507‑859998
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     
tgtttgAACCAACTGGGTTGCACCTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCt                                                                                                                                                                                                                                                    <  1:468089/251‑1 (MQ=255)
 gtttgAACCAACTGGGTTGCACCTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCtt                                                                                                                                                                                                                                                   >  1:398136/1‑251 (MQ=255)
          aaCTGGGTTGCACCTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTcagcag                                                                                                                                                                                                                                          <  1:334324/251‑1 (MQ=255)
          aaCTGGGTTGCACCTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTcagcag                                                                                                                                                                                                                                          <  1:881679/251‑1 (MQ=255)
                  tGCACCTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTAttttt                                                                                                                                                                                                                                  <  1:39906/251‑1 (MQ=255)
                      ccTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTaatg                                                                                                                                                                                                                              >  1:791841/1‑248 (MQ=255)
                      ccTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTaatg                                                                                                                                                                                                                              >  1:849852/1‑248 (MQ=255)
                      ccTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTaatg                                                                                                                                                                                                                              >  1:20993/1‑248 (MQ=255)
                      ccTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACAGTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTaatg                                                                                                                                                                                                                              <  1:109342/251‑4 (MQ=255)
                       cTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGc                                                                                                                                                                                                                             <  1:83593/251‑1 (MQ=255)
                       cTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTGGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGc                                                                                                                                                                                                                             <  1:444036/251‑1 (MQ=255)
                          tATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTa                                                                                                                                                                                                                           >  1:276263/1‑250 (MQ=255)
                            tCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACAt                                                                                                                                                                                                                        <  1:632705/251‑1 (MQ=255)
                            tCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACAt                                                                                                                                                                                                                        <  1:618767/251‑1 (MQ=255)
                                         tttGTGCGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCatatac                                                                                                                                                                                                           <  1:484353/251‑3 (MQ=255)
                                               cGTACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACttcac                                                                                                                                                                                                      <  1:269798/250‑4 (MQ=255)
                                                 tACGCATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACttcactat                                                                                                                                                                                                   >  1:92237/1‑245 (MQ=255)
                                                     cATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCt                                                                                                                                                                                                                                                    >  1:270020/1‑198 (MQ=255)
                                                     cATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAAc                                                                                                                                                                                                                     <  1:336556/229‑1 (MQ=255)
                                                     cATTTAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACttcactatttgg                                                                                                                                                                                               >  1:695876/1‑241 (MQ=255)
                                                        ttAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACttcactatttggagc                                                                                                                                                                                            <  1:155145/251‑14 (MQ=255)
                                                        ttAATGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACttcactatttggagc                                                                                                                                                                                            <  1:75646/251‑14 (MQ=255)
                                                          aaTGAGAACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAAc                                                                                                                                                                                                                     >  1:330657/1‑224 (MQ=255)
                                                               gaACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTcagcag                                                                                                                                                                                                                                          >  1:107458/1‑198 (MQ=255)
                                                               gaACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAAc                                                                                                                                                                                                                     <  1:225774/219‑1 (MQ=255)
                                                               gaACATTGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCatat                                                                                                                                                                                                             <  1:625327/227‑1 (MQ=255)
                                                                    ttGCTCCGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACttcactatttggagccagacctaacgc                                                                                                                                                                                <  1:77006/251‑26 (MQ=255)
                                                                      gctccGAGAACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTcag                                                                                                                                                                                                                                             >  1:602000/4‑188 (MQ=255)
                                                                             gaACTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTcagc                                                                                                                                                                                                                                            <  1:836463/182‑1 (MQ=255)
                                                                                cTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAAc                                                                                                                                                                                                                     >  1:690772/1‑202 (MQ=255)
                                                                                cTGCACAGCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACttcactattt                                                                                                                                                                                                 >  1:68651/1‑214 (MQ=255)
                                                                                       gCATATCAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCatatac                                                                                                                                                                                                           <  1:806659/205‑3 (MQ=255)
                                                                                                  gTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAAc                                                                                                                                                                                                                     >  1:56953/1‑184 (MQ=255)
                                                                                                             aaaGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTAttttt                                                                                                                                                                                                                                  >  1:717180/1‑160 (MQ=255)
                                                                                                              aaGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAAccg                                                                                                                                                                                                                   <  1:797297/174‑2 (MQ=255)
                                                                                                                                  aTCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACAt                                                                                                                                                                                                                        <  1:146973/149‑1 (MQ=255)
                                                                                                                                               ctTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACttcac                                                                                                                                                                                                      <  1:123365/154‑4 (MQ=255)
                                                                                                                                                          gatgaATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCatatac                                                                                                                                                                                                           >  1:61838/1‑136 (MQ=255)
                                                                                                                                                            tgaATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAAccggc                                                                                                                                                                                                                 >  1:511361/1‑127 (MQ=255)
                                                                                                                                                            tgaATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCatatact                                                                                                                                                                                                          >  1:238118/1‑134 (MQ=255)
                                                                                                                                                            tgaATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCatatact                                                                                                                                                                                                          >  1:421842/1‑134 (MQ=255)
                                                                                                                                                                         tGAATCAACTTCTTGAGTATTATTTTCGACAGGCAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAg                                                                       <  1:108817/251‑1 (MQ=255)
                                                                                                                                                                           aaTCAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAAc                                                                                                                                                                                                                     <  1:818847/111‑1 (MQ=255)
                                                                                                                                                                              cAACTTCTTGAGTATTATTTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTg                                                                  <  1:410931/251‑1 (MQ=255)
                                                                                                                                                                                              attTTCGACAGGTAATATGACTAACTTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGcgg                                                  >  1:725284/1‑249 (MQ=255)
                                                                                                                                                                                                              atgactaactTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCtataaac                                  <  1:877339/248‑4 (MQ=255)
                                                                                                                                                                                                              atgactaactTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCtataaac                                  <  1:464845/248‑4 (MQ=255)
                                                                                                                                                                                                                    aactTCGATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCtataaacagatac                            <  1:606079/251‑10 (MQ=255)
                                                                                                                                                                                                                      cttcgATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCtataaacagatacat                          >  1:551970/5‑240 (MQ=255)
                                                                                                                                                                                                                      cttcgATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCtataaacagatacat                          <  1:780671/247‑12 (MQ=255)
                                                                                                                                                                                                                        tcgATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCtataaacagatacatag                        <  1:62278/249‑14 (MQ=255)
                                                                                                                                                                                                                        tcgATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCtataaacagatacatag                        <  1:773401/249‑14 (MQ=255)
                                                                                                                                                                                                                        tcgATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCtataaacagatacatag                        <  1:479787/249‑14 (MQ=255)
                                                                                                                                                                                                                        tcgATTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCtataaacagatacatag                        <  1:894938/249‑14 (MQ=255)
                                                                                                                                                                                                                           aTTCTCTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAgtat                                                                    >  1:857967/1‑202 (MQ=255)
                                                                                                                                                                                                                             tctcTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTACAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGtctc                    >  1:453155/1‑250 (MQ=255)
                                                                                                                                                                                                                             tctcTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGcggtttgct                                            <  1:445055/226‑9 (MQ=255)
                                                                                                                                                                                                                              ctctATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTccg                  >  1:885580/1‑250 (MQ=255)
                                                                                                                                                                                                                              ctctATCCAGTGAATAGAATTTTTTAGCTCGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAgt                                                                      <  1:454210/199‑1 (MQ=255)
                                                                                                                                                                                                                                  aTCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCtataaacagatacatag                        >  1:459579/1‑228 (MQ=255)
                                                                                                                                                                                                                                        tGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGATCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAAt          <  1:454188/249‑1 (MQ=255)
                                                                                                                                                                                                                                        tGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGATCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAAt          <  1:448427/249‑1 (MQ=255)
                                                                                                                                                                                                                                         gAATAGAATTTTTTAGCTTTTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTgcggg                                                              <  1:63357/196‑3 (MQ=255)
                                                                                                                                                                                                                                              gAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCtataaacagatacatagtc                      <  1:279359/231‑16 (MQ=255)
                                                                                                                                                                                                                                              gAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTa  >  1:2960/1‑251 (MQ=255)
                                                                                                                                                                                                                                              gAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTa  >  1:543537/1‑251 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     
TGTTTGAACCAACTGGGTTGCACCTTTATCCAGAGAGAAATTTTGTGCGTACGCATTTAATGAGAACATTGCCCCGAGAACTGCACAGCATATTAATTGTTTTTTGCCAAAAGTATGATTCCAATTTTGCATCTTATTGACCTCTTAATTTTCTGATGAATACACCGCGTGAATCAACTTCTTGAGTATTATTTTCGGCAGGTAATATAACTAACTTTGATTCTCTATCCAGTGAATAGAATTTTTTTGCTTGTTCAGCAGTTATTTTTAGTGCTACATAACCAGCATATTCTTGATTGTTTGGAATCCCG‑TCTGCTGCCTTTTCAGCTTCAGGAGCACCTTGTTCTGTTGATTGAGTAAAGTTTCTTGCTTGTAAAACCAATACTTTACCTAAAATTTTAACTAAATCTTTACGATCATAAGTGTTGCGCGAATCTGAAGCAATTTGTTGGCTATAGATAGCAACATAGTCTCCACTTAAAATAGTATTTA  >  1/859507‑859998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑