Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 858,757 T→C intergenic (‑9100/‑63461) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Leu‑GAG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1858,7570TC100.0% 187.2 / NA 69intergenic (‑9100/‑63461)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (35/34);  total (35/34)

GTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACCTCAAATAAAGATTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑TTCCATCAAAGTTATAGTTACCTGCAATAGTGCTTACTGTTTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTAGCCGCAACAGCGAGTTTTATCCCAAACTCCTTATAGATAATTGTTGGTGAACCATCTCTATCCCGCTGTGCAAATGGGATTTCTCCCCCCACTAAGATATCGGCAGTTTCACCGGATAACATAGAAATGTTCGGTTCGGCCAGAACTTTACCATTACTTTGGTTATCTAAAGCATTAATAAAGGCAGAAATACCTTTCGCATCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTACCGGCAACGTGG  >  1/858511‑858997
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                
gTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGaa                                                                                                                                                                                                                                               >  1:619642/1‑250 (MQ=255)
           cAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATct                                                                                                                                                                                                                                   <  1:624027/251‑2 (MQ=255)
           cAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATct                                                                                                                                                                                                                                   <  1:260867/251‑2 (MQ=255)
                         cTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATg                                                                                                                                                                                                                      <  1:686939/250‑1 (MQ=255)
                           gAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCa                                                                                                                                                                                                                                            <  1:373521/226‑1 (MQ=255)
                           gAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGa                                                                                                                                                                                                                   >  1:298449/1‑251 (MQ=255)
                           gAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTA‑ATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGAt                                                                                                                                                                                                                  >  1:610478/1‑251 (MQ=255)
                                           ataaAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTaa                                                                                                                                                                                                   >  1:572700/1‑251 (MQ=255)
                                              aaaCTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGat                                                                                                                                                                                                <  1:537119/251‑1 (MQ=255)
                                              aaaCTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGat                                                                                                                                                                                                <  1:672845/251‑1 (MQ=255)
                                                               tacttCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCAcctg                                                                                                                                                                               <  1:299047/247‑3 (MQ=255)
                                                                acttCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCAcctga                                                                                                                                                                              >  1:458771/4‑248 (MQ=255)
                                                                      aaTAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATctc                                                                                                                                                                                                                                  <  1:302300/193‑3 (MQ=255)
                                                                           agactttGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTA‑TTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGAtt                                                                                                                                                                                                                 >  1:213319/5‑204 (MQ=255)
                                                                             actttGCTTTACGGGTATTAAAGAACGGAATATTCCCGACTTCC‑TCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGaaa                                                                                                                                                                   <  1:699856/247‑1 (MQ=255)
                                                                             actttGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGaaa                                                                                                                                                                   <  1:42944/247‑1 (MQ=255)
                                                                             actttGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATGTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGaaa                                                                                                                                                                   <  1:619916/247‑1 (MQ=255)
                                                                                  gCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATgttcgg                                                                                                                                                            >  1:503844/1‑251 (MQ=255)
                                                                                          ggTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGAt                                                                                                                                                                             >  1:385210/1‑226 (MQ=255)
                                                                                           gTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAg                                                                                                                                                   >  1:132618/1‑251 (MQ=255)
                                                                                                aaaGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAAc                                                                                                                                                >  1:858954/1‑249 (MQ=255)
                                                                                                        gAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTAc                                                                                                                                           <  1:610723/246‑1 (MQ=255)
                                                                                                        gAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCAtt                                                                                                                                       <  1:54873/250‑1 (MQ=255)
                                                                                                         aaTATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTAc                                                                                                                                     <  1:183680/251‑1 (MQ=255)
                                                                                                            atTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACttt                                                                                                                                  >  1:33771/1‑251 (MQ=255)
                                                                                                            atTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACttt                                                                                                                                  >  1:203713/1‑251 (MQ=255)
                                                                                                               cccGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGt                                                                                                                               <  1:522610/251‑1 (MQ=255)
                                                                                                                               gTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGaaa                                                                                                                                                                   <  1:591550/200‑1 (MQ=255)
                                                                                                                                ttATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATtaat                                                                                                               <  1:2316/251‑1 (MQ=255)
                                                                                                                                       taccagctatggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCa                                                                                                        >  1:716543/12‑251 (MQ=255)
                                                                                                                                          cagctatggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATaaacgcggaa                                                                                                     >  1:419890/9‑244 (MQ=255)
                                                                                                                                            gctatggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGtt                                                                                                                              >  1:791753/7‑224 (MQ=255)
                                                                                                                                               atggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGaaa                                                                                                                                                                   >  1:580253/4‑184 (MQ=255)
                                                                                                                                                tggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCt                                                                                               <  1:685726/249‑1 (MQ=255)
                                                                                                                                                 ggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATgt                                                                                                                                                                <  1:582482/184‑1 (MQ=255)
                                                                                                                                                 ggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAAc                                                                                                                                                <  1:269539/200‑1 (MQ=255)
                                                                                                                                                       tACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGatat                                                                                                                                                                                              >  1:781322/1‑149 (MQ=255)
                                                                                                                                                          tgattGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATg                                                                                                                                                                                                                      <  1:489199/119‑1 (MQ=255)
                                                                                                                                                              tGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACg                                                                                 <  1:869532/251‑1 (MQ=255)
                                                                                                                                                              tGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACg                                                                                 <  1:514622/251‑1 (MQ=255)
                                                                                                                                                               gATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATtaat                                                                                                               >  1:303161/1‑220 (MQ=255)
                                                                                                                                                                aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTAc                                                                                                                                     <  1:637786/197‑1 (MQ=255)
                                                                                                                                                                aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTaaggc                                                                                                                     <  1:17872/213‑4 (MQ=255)
                                                                                                                                                                aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATtaa                                                                                                                <  1:398208/218‑1 (MQ=255)
                                                                                                                                                                aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATaaa                                                                                                            <  1:348614/222‑1 (MQ=255)
                                                                                                                                                                aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTa                                                                               >  1:184271/1‑251 (MQ=255)
                                                                                                                                                                aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTa                                                                               >  1:300619/1‑251 (MQ=255)
                                                                                                                                                                aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTa                                                                               >  1:592527/1‑251 (MQ=255)
                                                                                                                                                                      ggCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGTAACAGCGAGCTTTATCCCAAACTCCTTATATATACTTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGAGATCGGCAGTTTCACCTGACAACATAGAAATGTTCGGTTCGGCCAGTACCTTACCATTACTTTGGTTATCTAAGGCATTAATaaacgc                                                                                                         >  1:510225/1‑216 (MQ=255)
                                                                                                                                                                               aaTACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGAttt                                                                 <  1:735236/250‑1 (MQ=255)
                                                                                                                                                                                       tattTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAAt                                                        <  1:351871/251‑1 (MQ=255)
                                                                                                                                                                                        attTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATc                                                       <  1:2014/251‑1 (MQ=255)
                                                                                                                                                                                              ttGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTc                                                 <  1:532332/251‑1 (MQ=255)
                                                                                                                                                                                                              aCAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATac                                                                           >  1:688489/1‑209 (MQ=255)
                                                                                                                                                                                                                     gctttATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGa                            >  1:595627/3‑249 (MQ=255)
                                                                                                                                                                                                                          aTCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATgg                     <  1:421541/251‑1 (MQ=255)
                                                                                                                                                                                                                                  cTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGaaa                                                                                                    <  1:249823/164‑1 (MQ=255)
                                                                                                                                                                                                                                  cTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTa              >  1:627781/1‑250 (MQ=255)
                                                                                                                                                                                                                                    ccTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATac                                                                           >  1:134773/1‑187 (MQ=255)
                                                                                                                                                                                                                                      ttATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTACCGGc         <  1:420350/251‑1 (MQ=255)
                                                                                                                                                                                                                                        atataTAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGt                                                                                >  1:754848/5‑178 (MQ=255)
                                                                                                                                                                                                                                        atataTAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATgg                     >  1:753350/5‑237 (MQ=255)
                                                                                                                                                                                                                                        atataTAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTACCGGCaa       >  1:13981/5‑251 (MQ=255)
                                                                                                                                                                                                                                          ataTAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAAc                                           >  1:839881/3‑213 (MQ=255)
                                                                                                                                                                                                                                          ataTAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTACCGGc         >  1:226137/3‑247 (MQ=255)
                                                                                                                                                                                                                                          ataTAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTACCGGCAACg     >  1:372500/3‑251 (MQ=255)
                                                                                                                                                                                                                                          ataTAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTACCGGCAACg     >  1:760940/3‑251 (MQ=255)
                                                                                                                                                                                                                                          ataTAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTACCGGCAACg     >  1:464950/3‑251 (MQ=255)
                                                                                                                                                                                                                                               aTTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTACCGGCAACGTga  >  1:568677/1‑248 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                
GTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACCTCAAATAAAGATTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑TTCCATCAAAGTTATAGTTACCTGCAATAGTGCTTACTGTTTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTAGCCGCAACAGCGAGTTTTATCCCAAACTCCTTATAGATAATTGTTGGTGAACCATCTCTATCCCGCTGTGCAAATGGGATTTCTCCCCCCACTAAGATATCGGCAGTTTCACCGGATAACATAGAAATGTTCGGTTCGGCCAGAACTTTACCATTACTTTGGTTATCTAAAGCATTAATAAAGGCAGAAATACCTTTCGCATCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTACCGGCAACGTGG  >  1/858511‑858997

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑