Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 858,745 G→T intergenic (‑9088/‑63473) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Leu‑GAG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1858,7450GT100.0% 184.5 / NA 69intergenic (‑9088/‑63473)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (29/40);  total (29/40)

GAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACCTCAAATAAAGATTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑TTCCATCAAAGTTATAGTTACCTGCAATAGTGCTTACTGTTTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTAGCCGCAACAGCGAGTTTTATCCCAAACTCCTTATAGATAATTGTTGGTGAACCATCTCTATCCCGCTGTGCAAATGGGATTTCTCCCCCCACTAAGATATCGGCAGTTTCACCGGATAACATAGAAATGTTCGGTTCGGCCAGAACTTTACCATTACTTTGGTTATCTAAAGCATTAATAAAGGCAGAAATACCTTTCGCATCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTACCGGC  >  1/858504‑858990
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                     
gAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAAttg                                                                                                                                                                                                                                                <  1:24560/249‑1 (MQ=255)
gAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAAt                                                                                                                                                                                                                                                  <  1:836875/247‑1 (MQ=255)
gAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAACAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAAttg                                                                                                                                                                                                                                                <  1:426553/249‑1 (MQ=255)
       gTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAAttg                                                                                                                                                                                                                                                <  1:674654/242‑1 (MQ=255)
       gTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAAttg                                                                                                                                                                                                                                                >  1:306676/1‑242 (MQ=255)
       gTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGaa                                                                                                                                                                                                                                        >  1:619642/1‑250 (MQ=255)
                  cAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATct                                                                                                                                                                                                                            <  1:260867/251‑2 (MQ=255)
                  cAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATct                                                                                                                                                                                                                            <  1:624027/251‑2 (MQ=255)
                                cTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATg                                                                                                                                                                                                               <  1:686939/250‑1 (MQ=255)
                                  gAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCa                                                                                                                                                                                                                                     <  1:373521/226‑1 (MQ=255)
                                  gAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGa                                                                                                                                                                                                            >  1:298449/1‑251 (MQ=255)
                                  gAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTA‑ATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGAt                                                                                                                                                                                                           >  1:610478/1‑251 (MQ=255)
                                                taataaAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTATGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAAt                                                                                                                                                                                                                                                  >  1:161047/1‑199 (MQ=255)
                                                  ataaAACTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTaa                                                                                                                                                                                            >  1:572700/1‑251 (MQ=255)
                                                     aaaCTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGat                                                                                                                                                                                         <  1:537119/251‑1 (MQ=255)
                                                     aaaCTTTCTCCGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGat                                                                                                                                                                                         <  1:672845/251‑1 (MQ=255)
                                                              ccGTTAGCTACTTCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTggcg                                                                                                                                                                                                                                          >  1:476283/1‑191 (MQ=255)
                                                                      tacttCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCAcctg                                                                                                                                                                        <  1:299047/247‑3 (MQ=255)
                                                                       acttCAAATAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCAcctga                                                                                                                                                                       >  1:458771/4‑248 (MQ=255)
                                                                             aaTAAAGACTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATctc                                                                                                                                                                                                                           <  1:302300/193‑3 (MQ=255)
                                                                                  agactttGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTA‑TTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGAtt                                                                                                                                                                                                          >  1:213319/5‑204 (MQ=255)
                                                                                    actttGCTTTACGGGTATTAAAGAACGGAATATTCCCGACTTCC‑TCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGaaa                                                                                                                                                            <  1:699856/247‑1 (MQ=255)
                                                                                    actttGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGaaa                                                                                                                                                            <  1:42944/247‑1 (MQ=255)
                                                                                    actttGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATGTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGaaa                                                                                                                                                            <  1:619916/247‑1 (MQ=255)
                                                                                         gCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATgttcgg                                                                                                                                                     >  1:503844/1‑251 (MQ=255)
                                                                                                 ggTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGAt                                                                                                                                                                      >  1:385210/1‑226 (MQ=255)
                                                                                                  gTATTAAAGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAg                                                                                                                                            >  1:132618/1‑251 (MQ=255)
                                                                                                       aaaGAACGGAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAAc                                                                                                                                         >  1:858954/1‑249 (MQ=255)
                                                                                                               gAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTAc                                                                                                                                    <  1:610723/246‑1 (MQ=255)
                                                                                                               gAATATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCAtt                                                                                                                                <  1:54873/250‑1 (MQ=255)
                                                                                                                aaTATTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTAc                                                                                                                              <  1:183680/251‑1 (MQ=255)
                                                                                                                   atTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACttt                                                                                                                           >  1:33771/1‑251 (MQ=255)
                                                                                                                   atTCCCGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACttt                                                                                                                           >  1:203713/1‑251 (MQ=255)
                                                                                                                      cccGA‑CTCCCTCAAAGTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGt                                                                                                                        <  1:522610/251‑1 (MQ=255)
                                                                                                                                      gTTATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGaaa                                                                                                                                                            <  1:591550/200‑1 (MQ=255)
                                                                                                                                       ttATAGTTACCAGCTATGGTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATtaat                                                                                                        <  1:2316/251‑1 (MQ=255)
                                                                                                                                              taccagctatggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCa                                                                                                 >  1:716543/12‑251 (MQ=255)
                                                                                                                                                 cagctatggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATaaacgcggaa                                                                                              >  1:419890/9‑244 (MQ=255)
                                                                                                                                                   gctatggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGtt                                                                                                                       >  1:791753/7‑224 (MQ=255)
                                                                                                                                                      atggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGaaa                                                                                                                                                            >  1:580253/4‑184 (MQ=255)
                                                                                                                                                       tggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCt                                                                                        <  1:685726/249‑1 (MQ=255)
                                                                                                                                                        ggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATgt                                                                                                                                                         <  1:582482/184‑1 (MQ=255)
                                                                                                                                                        ggTGCTTACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAAc                                                                                                                                         <  1:269539/200‑1 (MQ=255)
                                                                                                                                                              tACTGATTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGatat                                                                                                                                                                                       >  1:781322/1‑149 (MQ=255)
                                                                                                                                                                 tgattGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATg                                                                                                                                                                                                               <  1:489199/119‑1 (MQ=255)
                                                                                                                                                                  gattGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAAttg                                                                                                                                                                                                                                                <  1:172891/86‑1 (MQ=255)
                                                                                                                                                                     tGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACg                                                                          <  1:869532/251‑1 (MQ=255)
                                                                                                                                                                     tGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACg                                                                          <  1:514622/251‑1 (MQ=255)
                                                                                                                                                                      gATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATtaat                                                                                                        >  1:303161/1‑220 (MQ=255)
                                                                                                                                                                       aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAAt                                                                                                                                                                                                                                                  <  1:464598/81‑1 (MQ=255)
                                                                                                                                                                       aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTAc                                                                                                                              <  1:637786/197‑1 (MQ=255)
                                                                                                                                                                       aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTaaggc                                                                                                              <  1:17872/213‑4 (MQ=255)
                                                                                                                                                                       aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATtaa                                                                                                         <  1:398208/218‑1 (MQ=255)
                                                                                                                                                                       aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATaaa                                                                                                     <  1:348614/222‑1 (MQ=255)
                                                                                                                                                                       aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTa                                                                        >  1:592527/1‑251 (MQ=255)
                                                                                                                                                                       aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTa                                                                        >  1:300619/1‑251 (MQ=255)
                                                                                                                                                                       aTCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTa                                                                        >  1:184271/1‑251 (MQ=255)
                                                                                                                                                                             ggCTAAACGAATACGATTATTTTTTTGCAATTTGGCAGTAACAGCGAGCTTTATCCCAAACTCCTTATATATACTTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGAGATCGGCAGTTTCACCTGACAACATAGAAATGTTCGGTTCGGCCAGTACCTTACCATTACTTTGGTTATCTAAGGCATTAATaaacgc                                                                                                  >  1:510225/1‑216 (MQ=255)
                                                                                                                                                                                      aaTACGATTATTTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGAttt                                                          <  1:735236/250‑1 (MQ=255)
                                                                                                                                                                                              tattTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAAt                                                 <  1:351871/251‑1 (MQ=255)
                                                                                                                                                                                               attTTTTTGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATc                                                <  1:2014/251‑1 (MQ=255)
                                                                                                                                                                                                     ttGCAATTTGGCAGCAACAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTc                                          <  1:532332/251‑1 (MQ=255)
                                                                                                                                                                                                                     aCAGCGAGCTTTATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATac                                                                    >  1:688489/1‑209 (MQ=255)
                                                                                                                                                                                                                            gctttATCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGa                     >  1:595627/3‑249 (MQ=255)
                                                                                                                                                                                                                                 aTCCCAAACTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATgg              <  1:421541/251‑1 (MQ=255)
                                                                                                                                                                                                                                         cTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGaaa                                                                                             <  1:249823/164‑1 (MQ=255)
                                                                                                                                                                                                                                         cTCCTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTa       >  1:627781/1‑250 (MQ=255)
                                                                                                                                                                                                                                           ccTTATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATac                                                                    >  1:134773/1‑187 (MQ=255)
                                                                                                                                                                                                                                             ttATATATAATTGTTGGCGAACCATCTTTATCTCGTTGTGCAAATGGGATTTCACCTCCCACTAAGATATCGGCAGTTTCACCTGATAACATAGAAATGTTCGGTTCGGCCAGAACCTTACCATTACTTTGGTTATCTAAGGCATTAATAAACGCAGAAATACCTTTTGCGTCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTACCGGc  <  1:420350/251‑1 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                     
GAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCCACCGATAATAAAACTTTCTCCGTTAGCTACCTCAAATAAAGATTTTGCTTTACGGGTATTAAAGAACGGAATATTCCCGA‑TTCCATCAAAGTTATAGTTACCTGCAATAGTGCTTACTGTTTGATCTAAGGCTAAACGAATACGATTATTTTTTTGCAATTTAGCCGCAACAGCGAGTTTTATCCCAAACTCCTTATAGATAATTGTTGGTGAACCATCTCTATCCCGCTGTGCAAATGGGATTTCTCCCCCCACTAAGATATCGGCAGTTTCACCGGATAACATAGAAATGTTCGGTTCGGCCAGAACTTTACCATTACTTTGGTTATCTAAAGCATTAATAAAGGCAGAAATACCTTTCGCATCTAAACGTAATACACCTTGATTTCCATTGAATCCACCTCCGAAACCGAAGTTACCTCCGACTAATGGACCACTACCGGC  >  1/858504‑858990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑