Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 858,301 T→C intergenic (‑8644/‑63917) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Leu‑GAG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1858,3010TC100.0% 185.4 / NA 65intergenic (‑8644/‑63917)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (34/31);  total (34/31)

ATTAAATAAATTACTATAACTGACATTAGAGTAATCCGGTAATACATAACGATCGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTTAACAAATTCACTGATTGCAAATGTTGTTACCGGGGCGGTAATTGAGGCCAATGCAATGGAGGCCGTGATAACTAATTTTCTCATTGTATGAACCCACTATTTTTTAAGAAGTTAGATGTTAATGTTTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAATAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCCACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCACTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCC  >  1/858062‑858546
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                     
attgaataaatTACTATAACTGACATTAGAATAATCCGGTAATACATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAAc                                                                                                                                                                                                                                            <  1:801448/247‑1 (MQ=255)
                      aCATTAGAATAATCCGGTAATACATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAAc                                                                                                                                                                                                                                            >  1:882225/1‑229 (MQ=255)
                       cATTAGAATAATCCGGTAATACATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAAc                                                                                                                                                                                                                                            <  1:160/228‑1 (MQ=255)
                       cATTAGAATAATCCGGTAATACATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGga                                                                                                                                                                                                                     >  1:438033/1‑251 (MQ=255)
                           agaatAATCCGGTAATACATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGtaa                                                                                                                                                                                                                                                 >  1:855606/5‑219 (MQ=255)
                            gaatAATCCGGTAATACATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAAt                                                                                                                                                                                                                >  1:143061/4‑251 (MQ=255)
                                    cGGTAATACATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTc                                                                                                                                                                                                                                        <  1:359177/219‑1 (MQ=255)
                                    cGGTAATACATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATgg                                                                                                                                                                                                                      >  1:761327/1‑237 (MQ=255)
                                      gTAATACATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTg                                                                                                                                                                                                      >  1:610757/1‑251 (MQ=255)
                                        aaTACATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACgg                                                                                                                                                                                                                                >  1:407852/1‑223 (MQ=255)
                                         aTACATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGga                                                                                                                                                                                                                     >  1:386682/1‑233 (MQ=255)
                                         aTACATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGtt                                                                                                                                                                                                    >  1:685583/1‑250 (MQ=255)
                                           aCATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAAc                                                                                                                                                                                                                                  <  1:5876/218‑1 (MQ=255)
                                           aCATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGgaag                                                                                                                                                                                                                   <  1:758341/233‑1 (MQ=255)
                                            cATAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTc                                                                                                                                                                                                   <  1:830495/248‑1 (MQ=255)
                                              tAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAAc                                                                                                                                                                                                                                            <  1:730276/205‑1 (MQ=255)
                                              tAACGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGACCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGtt                                                                                                                                                                                              <  1:676821/251‑1 (MQ=255)
                                                aCGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGtttt                                                                                                                                                                                            >  1:480649/1‑251 (MQ=255)
                                                 cGATTGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGtt                                                                                                                                                                                              <  1:424317/248‑1 (MQ=255)
                                                   attgACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGgaag                                                                                                                                                                                                                   <  1:500870/222‑1 (MQ=255)
                                                    ttgACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAAc                                                                                                                                                                                                                                  >  1:845507/3‑209 (MQ=255)
                                                      gACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATc                                                                                                                                                                                                               >  1:229865/1‑226 (MQ=255)
                                                        cTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGtaa                                                                                                                                                                                                                                                 <  1:542475/190‑1 (MQ=255)
                                                           aCTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGgaag                                                                                                                                                                                                                   <  1:750070/217‑1 (MQ=255)
                                                              gtgtACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGt                                                                                                                                                                              >  1:886097/1‑251 (MQ=255)
                                                                                 aTTTTGTACCGGTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGtaa                                                                                                                                                                                                                                                 <  1:735330/165‑1 (MQ=255)
                                                                                            gTTGTGCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTta                                                                                                                                                >  1:569516/1‑251 (MQ=255)
                                                                                               gtgCAACAGTCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTtacta                                                                                                                                             >  1:315531/1‑251 (MQ=255)
                                                                                                        tCGTATCGTCAACAAATTCATTGATTGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCACTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTg                                                                                                                                    <  1:26189/251‑1 (MQ=255)
                                                                                                                                 tGCAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCtttttt                                                                                                           <  1:743436/251‑1 (MQ=255)
                                                                                                                                   cAAATGTTTTTGCCGGAACGATAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTAt                                                                                                         >  1:277222/1‑251 (MQ=255)
                                                                                                                                                     cgatAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATgg                                                                                                                                                                                                                      >  1:5970/4‑124 (MQ=255)
                                                                                                                                                     cgatAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGt                                                                                                                                   <  1:47207/204‑1 (MQ=255)
                                                                                                                                                     cgatAATTGAGGCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCat                                                                                       <  1:25320/248‑2 (MQ=255)
                                                                                                                                                                gCCAATGCAATGGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGgaagaa                                                                             <  1:524493/250‑1 (MQ=255)
                                                                                                                                                                    atgcaatgGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAagaaagaa                                                                         >  1:390986/1‑250 (MQ=255)
                                                                                                                                                                    atgcaatgGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAagaaagaa                                                                         >  1:677226/1‑250 (MQ=255)
                                                                                                                                                                    atgcaatgGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAagaaagaa                                                                         >  1:299605/1‑250 (MQ=255)
                                                                                                                                                                    atgcaatgGAGGCCGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACAATCTTTAACGGAGTCGTATGGAAGAATCTTTcc                                                                                                                                                                                                          <  1:403531/121‑1 (MQ=255)
                                                                                                                                                                                ccGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTAt                                                                                                         >  1:47135/1‑206 (MQ=255)
                                                                                                                                                                                ccGTAATAACTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAgttgt                                                                                            >  1:477827/1‑219 (MQ=255)
                                                                                                                                                                                         cTAATTTTCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCttttt                                                                                                                                                               >  1:160012/1‑143 (MQ=255)
                                                                                                                                                                                               ttCTCATTGTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAagag                                             <  1:584154/251‑1 (MQ=255)
                                                                                                                                                                                                       gTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATg                                                          >  1:350451/1‑230 (MQ=255)
                                                                                                                                                                                                       gTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTg                                     >  1:397528/1‑251 (MQ=255)
                                                                                                                                                                                                       gTATGAACCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTg                                     >  1:633376/1‑251 (MQ=255)
                                                                                                                                                                                                            aaCCCACTATTCTTTAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTT‑CATTACGGaagaaaga                                                                          <  1:893751/208‑1 (MQ=255)
                                                                                                                                                                                                                         ttAAGAAGTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGAtaactaac                                                                                                                   <  1:521202/155‑1 (MQ=255)
                                                                                                                                                                                                                              aagTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTGTTTATACCTTCAAGGTCATTTg               <  1:283624/250‑1 (MQ=255)
                                                                                                                                                                                                                                gTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAag                                               <  1:191150/216‑1 (MQ=255)
                                                                                                                                                                                                                                gTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAag                                               <  1:374242/216‑1 (MQ=255)
                                                                                                                                                                                                                                gTTAGATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTGTTTATACCTTCAAGGTCATTTGAg             >  1:156225/1‑250 (MQ=255)
                                                                                                                                                                                                                                    gATGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTaaaca                                                                                                                                                                         >  1:866502/1‑88 (MQ=255)
                                                                                                                                                                                                                                     aTGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGt                                                                                                                                   >  1:328686/1‑127 (MQ=255)
                                                                                                                                                                                                                                     aTGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAag                                               <  1:19574/211‑1 (MQ=255)
                                                                                                                                                                                                                                     aTGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTGTTTATACCTTCAAGGTCATTTGAGCTg          <  1:627371/248‑1 (MQ=255)
                                                                                                                                                                                                                                     aTGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAAt       <  1:343454/251‑1 (MQ=255)
                                                                                                                                                                                                                                     aTGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAAt       >  1:570967/1‑251 (MQ=255)
                                                                                                                                                                                                                                     aTGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAAt       >  1:734551/1‑251 (MQ=255)
                                                                                                                                                                                                                                      tGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCat                                                                                       <  1:673363/170‑2 (MQ=255)
                                                                                                                                                                                                                                      tGTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAATa      >  1:713673/1‑251 (MQ=255)
                                                                                                                                                                                                                                       gTTAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAATaa     >  1:19889/1‑251 (MQ=255)
                                                                                                                                                                                                                                         tAATGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAATAAGc   <  1:418738/251‑1 (MQ=255)
                                                                                                                                                                                                                                          aaTGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAACAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCTACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCATTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAATAAGcc  <  1:348098/251‑1 (MQ=255)
                                                                                                                                                                                                                                           aTGTCTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCAt                                                                                                                                                                                                        >  1:580306/1‑52 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                     
ATTAAATAAATTACTATAACTGACATTAGAGTAATCCGGTAATACATAACGATCGACTAACTGTGTACGATTAAATTCACTATTTTGTACCGGTTGTGCAACAGTCGTATCGTTAACAAATTCACTGATTGCAAATGTTGTTACCGGGGCGGTAATTGAGGCCAATGCAATGGAGGCCGTGATAACTAATTTTCTCATTGTATGAACCCACTATTTTTTAAGAAGTTAGATGTTAATGTTTTGTAATAAACATTCTTTAACGGAGTCGTATGGAAGAATCTTTCCATTGTTCCGGTTTTTTCAAAATCAGGGTAAATAACATCTTTTTCATTTACCGGTTTTACTACATTTACTGTTGCCACGATAACTAACTCTTTTTTATCGCGCTCAGTTGTTGCACTACGGAAGAAAGAACCTAAAATTGGGATGTCTCCTAAAAGAGGAACTTTGTTTATACCTTCAAGGTCATTTGAGCTGAATAAGCC  >  1/858062‑858546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑