Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 857,591 G→A intergenic (‑7934/‑64627) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Leu‑GAG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1857,5910GA100.0% 211.2 / NA 76intergenic (‑7934/‑64627)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (30/46);  total (30/46)

TCTCAACCATCTGACTTAACTGAGTATGCGAATTAAAGTAAAGGATGCCCTCATCTAGTAGTTTTTGTGATAAAGAGATGGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTATACTAAAAACTCGTTCGACAATAGTCTTTATGTTAGTCTCATGTGTGATATCAATAATAACCCCTACAGTGTCTTCTGCTGAAAATGAAATTTCATCAGATGAGGTGAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAATTTGTGCAACTTCACCTTGGATATCATCACGGCTTGACACTATAGTAATAGTGCGAGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATACTTCAATTGAACACGCTGATTACTTTTAAGTGCACAAGAAGTCTCA  >  1/857359‑857807
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                        
tctcAACCATCTGACTTAATTGGGTATGCGAATTAAAGTAAAGGATACCCTCATCTAGTAGTTTTTGTGATAAAGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAAc                                                                                                                                                                                                         >  1:331546/1‑250 (MQ=255)
   cAACCATCTGACTTAATTGGGTATGCGAATTAAAGTAAAGGATACCCTCATCTAGTAGTTTTTGTGATAAAGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAAtc                                                                                                                                                                                                     <  1:81503/251‑1 (MQ=255)
             aCTTAATTGGGTATGCGAATTAAAGTAAAGGATACCCTCATCTAGTAGTTTTTGTGATAAAGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATAtttt                                                                                                                                                                                           >  1:498609/1‑251 (MQ=255)
                 aattgggTATGCGAATTAAAGTAAAGGATACCCTCATCTAGTAGTTTTTGTGATAAAGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAg                                                                                                                                                                                       <  1:305685/245‑1 (MQ=255)
                          tGCGAATTAAAGTAAAGGATACCCTCATCTAGTAGTTTTTGTGATAAAGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGt                                                                                                                                                                              <  1:834043/251‑1 (MQ=255)
                                ttAAAGTAAAGGATACCCTCATCTAGTAGTTTTTGTGATAAAGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAg                                                                                                                                                                        <  1:547299/251‑1 (MQ=255)
                                   aagtaaagGATACCCTCATCTAGTAGTTTTTGTGATAAAGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGagt                                                                                                                                                                     >  1:42275/1‑249 (MQ=255)
                                        aagGATACCCTCATCTAGTAGTTTTTGTGATAAAGAGATTGAGTCACTATCACCGATAACGCAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTtgtg                                                                                                                                                                <  1:619879/251‑1 (MQ=255)
                                                   cATCTAGTAGTTTTTGTGATAAAGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGagtt                                                                                                                                                                    >  1:594277/1‑233 (MQ=255)
                                                   cATCTAGTAGTTTTTGTGATAAAGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCAc                                                                                                                                                       >  1:58988/1‑249 (MQ=255)
                                                            gtTTTTGTGATAAAGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATatca                                                                                                                                            >  1:101743/1‑251 (MQ=255)
                                                                  gtgATAAAGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAaaaa                                                                                                                                                                                                                      <  1:711300/171‑1 (MQ=255)
                                                                       aaaGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAAc                                                                                                                                                                                                         <  1:534043/179‑1 (MQ=255)
                                                                        aaGAGATTGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAAc                                                                                                                                                                                                         <  1:133029/178‑1 (MQ=255)
                                                                                 aGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGag                                                                                                                                                                      <  1:551800/204‑2 (MQ=255)
                                                                                      cTATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGatac                                                                                                                              <  1:303041/239‑4 (MQ=255)
                                                                                       tATCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGta                                                                                                                 <  1:791165/251‑2 (MQ=255)
                                                                                        aTCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAg                                                                                                                                                                        >  1:105799/1‑195 (MQ=255)
                                                                                        aTCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAg                                                                                                                   >  1:820219/1‑248 (MQ=255)
                                                                                        aTCACCGATAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGta                                                                                                                 <  1:560341/250‑2 (MQ=255)
                                                                                               aTAACACAACACCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAg                                                                                                                   <  1:728572/241‑1 (MQ=255)
                                                                                                  acacaacacCATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGtacgtgca                                                                                                           >  1:780066/1‑239 (MQ=255)
                                                                                                          ccATACATTTTGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAAc                                                                                                                                                                                                         <  1:406740/144‑1 (MQ=255)
                                                                                                                   ttGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCtt                                                                                                                                   <  1:498813/205‑1 (MQ=255)
                                                                                                                   ttGTGGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGtacgtgc                                                                                                            >  1:278232/1‑222 (MQ=255)
                                                                                                                     gtgGTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGa                                                                                   >  1:78445/1‑251 (MQ=255)
                                                                                                                        gTACTACACTAAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACtacag                                                                                                                         >  1:566742/1‑207 (MQ=255)
                                                                                                                             acactaAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGtaa                                                                           <  1:282716/249‑1 (MQ=255)
                                                                                                                              cactaAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAAAGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGtaat                                                                          <  1:228663/250‑1 (MQ=255)
                                                                                                                                ctaAAAACTCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAg                                                                                                                   <  1:220775/208‑1 (MQ=255)
                                                                                                                                        tCGTTCGACAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGta                                                                                                                 <  1:691729/202‑2 (MQ=255)
                                                                                                                                               aCAATAGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACtacag                                                                                                                         <  1:511697/187‑4 (MQ=255)
                                                                                                                                                    aGTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCACGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGta                                                                                                                 >  1:782614/1‑189 (MQ=255)
                                                                                                                                                     gTCTTTATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGta                                                                                                                 <  1:876917/189‑2 (MQ=255)
                                                                                                                                                         ttATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATAc                                               <  1:625355/251‑1 (MQ=255)
                                                                                                                                                         ttATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATAc                                               <  1:408840/251‑1 (MQ=255)
                                                                                                                                                         ttATATTAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATAc                                               <  1:324068/251‑1 (MQ=255)
                                                                                                                                                           atattAGTTTCATGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGc                                                                                                                                     <  1:509928/160‑1 (MQ=255)
                                                                                                                                                                      aTGTGTGATATCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATACTTCAATTGAacac                                  <  1:486786/251‑1 (MQ=255)
                                                                                                                                                                               atCAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCg                                                                                                 <  1:839672/179‑1 (MQ=255)
                                                                                                                                                                                 cAATAATAATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGc                                                                                                                                     <  1:532605/141‑1 (MQ=255)
                                                                                                                                                                                   ataataATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAg                                                                                                                                                                        >  1:660524/1‑104 (MQ=255)
                                                                                                                                                                                   ataataATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGag                                                                                                                                                                      >  1:332489/1‑105 (MQ=255)
                                                                                                                                                                                   ataataATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGag                                                                                                                                                                      >  1:279133/1‑105 (MQ=255)
                                                                                                                                                                                   ataataATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAg                                                                                                                   >  1:765928/1‑157 (MQ=255)
                                                                                                                                                                                   ataataATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGta                                                                                                                 <  1:710279/159‑2 (MQ=255)
                                                                                                                                                                                   ataataATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGAt                                                                                  <  1:689380/190‑1 (MQ=255)
                                                                                                                                                                                   ataataATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATAc                                               <  1:395769/225‑1 (MQ=255)
                                                                                                                                                                                   ataataATCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATACTTCAATTGAACACGCTGATTACtttt                     >  1:272975/1‑251 (MQ=255)
                                                                                                                                                                                    taataaTCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATACTTCAATTGAACACGCTGATTACTTTTa                    >  1:569616/1‑251 (MQ=255)
                                                                                                                                                                                     aataatCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACtacag                                                                                                                         >  1:638858/1‑146 (MQ=255)
                                                                                                                                                                                      ataaTCCCTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATACTTCAATTGAACACGCTGATTACTTTTAAg                  <  1:168698/251‑1 (MQ=255)
                                                                                                                                                                                          tcccTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGta                                                                                                                 <  1:868967/151‑2 (MQ=255)
                                                                                                                                                                                          tcccTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATAc                                                            >  1:342124/2‑205 (MQ=255)
                                                                                                                                                                                          tcccTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATACTTCAATTGAACACGCTGATTACTTTTAAg                  >  1:250263/2‑247 (MQ=255)
                                                                                                                                                                                             cTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCAc                                                                                                                                                       <  1:607264/111‑1 (MQ=255)
                                                                                                                                                                                             cTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAg                                                                                                                   <  1:719189/147‑1 (MQ=255)
                                                                                                                                                                                             cTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCAc                                                                                                          <  1:789176/156‑1 (MQ=255)
                                                                                                                                                                                             cTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGta                                                                            >  1:565482/1‑186 (MQ=255)
                                                                                                                                                                                             cTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAAc                                                                       >  1:434242/1‑191 (MQ=255)
                                                                                                                                                                                             cTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATAcc                                                           >  1:243357/1‑203 (MQ=255)
                                                                                                                                                                                             cTACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATACTTCAATTg                                       <  1:558359/223‑1 (MQ=255)
                                                                                                                                                                                              tACAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATACTTCAATTGAACACGCTGATTACTTTTAAGTGCACaag          <  1:799743/251‑1 (MQ=255)
                                                                                                                                                                                               aCAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTga                                                                                                                                                  >  1:678073/1‑113 (MQ=255)
                                                                                                                                                                                               aCAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATACTTCAATTGAACACGCTGATTACTTTTAAGTGCACaaga         >  1:527924/1‑251 (MQ=255)
                                                                                                                                                                                                cAGTATCTTCTGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACtacag                                                                                                                         <  1:569384/138‑4 (MQ=255)
                                                                                                                                                                                                    atcttctGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGatac                                                                                                                              >  1:404037/2‑126 (MQ=255)
                                                                                                                                                                                                    atcttctGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGat                                                                                                                                <  1:68192/126‑2 (MQ=255)
                                                                                                                                                                                                      cttctGCTGAAAATGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATACTTCAATTGAACACGCTGATTACTTTTAAGTGCACAAGAAGTCTCa  >  1:50804/1‑251 (MQ=255)
                                                                                                                                                                                                                aaaTGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTGCAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCt                                                                                <  1:75352/163‑1 (MQ=255)
                                                                                                                                                                                                                 aaTGAAATCTCATCAGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCAc                                                                                                                                        <  1:736425/106‑1 (MQ=255)
                                                                                                                                                                                                                           catcaGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAg                                                                                                                   <  1:422225/117‑1 (MQ=255)
                                                                                                                                                                                                                           catcaGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGta                                                                                                                 <  1:223572/119‑2 (MQ=255)
                                                                                                                                                                                                                           catcaGACGAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATACTTCAATTGAACACGCTGATTACTTTTAAg                  >  1:798203/1‑214 (MQ=255)
                                                                                                                                                                                                                                gacgAGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAACTTCACCTTGAATATCATCACGGCTTGATACTACAGTAATAGTACGTGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATAc                                               <  1:648798/177‑1 (MQ=255)
                                                                                                                                                                                                                                    aGGTAAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAGTTTGTGCAGCTTCACCTTGAATATCATCACGGCTTGATACTACAGTaa                                                                                                                      <  1:2161/105‑1 (MQ=255)
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                        
TCTCAACCATCTGACTTAACTGAGTATGCGAATTAAAGTAAAGGATGCCCTCATCTAGTAGTTTTTGTGATAAAGAGATGGAGTCACTATCACCGATAACACAACACCATACATTTTGTGGTACTATACTAAAAACTCGTTCGACAATAGTCTTTATGTTAGTCTCATGTGTGATATCAATAATAACCCCTACAGTGTCTTCTGCTGAAAATGAAATTTCATCAGATGAGGTGAAAAAATCCTTTTTAACAATCTCAATATTTTCAAGACCGCGAGTACGTAGAATTTGTGCAACTTCACCTTGGATATCATCACGGCTTGACACTATAGTAATAGTGCGAGCACTGTCTGCCGTGATTGTTTCTTGATCTAGTAATAACATAAAAAATACCTTCTATTAATACTTCAATTGAACACGCTGATTACTTTTAAGTGCACAAGAAGTCTCA  >  1/857359‑857807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑