Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 856,138 T→C intergenic (‑6481/‑66080) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Leu‑GAG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1856,1380TC100.0% 238.0 / NA 85intergenic (‑6481/‑66080)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (52/33);  total (52/33)

GTATCTTCTAGTGTGATGACACGTTCGGTATGGGAAATATAGTTAGATAGCGCATTAAGTAAGGTTGTTTTACCAGATCCTGTACCACCTGACACAATTATATTTACCCGGGATCTGGCAGCAATAATTAAGAAATTCGCCATTTCGCGAGTCATAGAACCAAAATTTACAAGCTCTTGCAATGTTTTTTTATTCTTACTGAATTTACGAATAGAAATGGATGTGCCATCTAATGCAATCGGTGCAATAACAACATTTAAACGGCTGCCATCAGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGGCGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACAAATTCTTTATCAGTTTTTTCCAGAATACCAGCACGTTCAACCCAGATGTCATTAGGGCCATTAACTAAAATATCATTTATAGTATCGTCAGCCATGAGATCTCGTA  >  1/855905‑856382
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                    
gTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAAtta                                                                                                                                                                                                                                      >  1:401642/1‑248 (MQ=255)
gTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAAtta                                                                                                                                                                                                                                      >  1:521795/1‑248 (MQ=255)
  aTCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATtacaa                                                                                                                                                                                                                                   >  1:544612/1‑251 (MQ=255)
    cttctAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTacaaca                                                                                                                                                                                                                                 >  1:489297/1‑251 (MQ=255)
           tgtgATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTaaa                                                                                                                                                                                                                           >  1:516466/1‑250 (MQ=255)
            gtgATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACg                                                                                                                                                                                                                         >  1:418083/1‑251 (MQ=255)
                      gTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATcg                                                                                                                                                                                                               >  1:268674/1‑250 (MQ=255)
                        tCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATcggg                                                                                                                                                                                                             <  1:761072/251‑4 (MQ=255)
                           gTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAg                                                                                                                                                                                                          >  1:235047/1‑251 (MQ=255)
                             aTGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTc                                                                                                                                                                                                        <  1:249121/251‑1 (MQ=255)
                                     tataATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTc                                                                                                                                                                                                 >  1:2897/1‑250 (MQ=255)
                                       taattAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATtacaa                                                                                                                                                                                                                                   >  1:571432/4‑214 (MQ=255)
                                       taattAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGt                                                                                                                                                                                                            <  1:640523/234‑1 (MQ=255)
                                       taattAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCa                                                                                                                                                                                               >  1:422294/4‑250 (MQ=255)
                                       taattAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCa                                                                                                                                                                                               >  1:697782/4‑250 (MQ=255)
                                       taattAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCAc                                                                                                                                                                                              <  1:408684/248‑1 (MQ=255)
                                       taattAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACAAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCa                                                                                                                                                                                               >  1:448071/4‑250 (MQ=255)
                                            aGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAAttac                                                                                                                                                                                                                                     <  1:731078/207‑4 (MQ=255)
                                            aGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATc                                                                                                                                                                                                                <  1:50244/228‑1 (MQ=255)
                                               tAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGAc                                                                                                                                                                                      <  1:601913/251‑1 (MQ=255)
                                               tAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGAc                                                                                                                                                                                      <  1:40588/251‑1 (MQ=255)
                                                   gcattaaggagagttgttTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAAttac                                                                                                                                                                                                                                     >  1:619802/13‑197 (MQ=255)
                                                   gcattaaggagagttgttTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTAc                                                                                                                                                                                   >  1:635676/13‑250 (MQ=255)
                                                    cattaaggagagttgttTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACca                                                                                                                                                                                 <  1:519038/240‑1 (MQ=255)
                                                    cattaaggagagttgttTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACca                                                                                                                                                                                 >  1:814888/12‑251 (MQ=255)
                                                    cattaaggagagttgttTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACca                                                                                                                                                                                 >  1:819003/12‑251 (MQ=255)
                                                        aaggagagttgttTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAAtta                                                                                                                                                                                                                                      >  1:479978/8‑192 (MQ=255)
                                                        aaggagagttgttTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCAt                                                                                                                                                                                                                 >  1:89988/8‑215 (MQ=255)
                                                             gagttgttTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAAtta                                                                                                                                                                                                                                      >  1:616421/3‑187 (MQ=255)
                                                                ttgttTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATAc                                                                                                                                                                       <  1:273647/249‑1 (MQ=255)
                                                                ttgttTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACga                                                                                                                                                                     <  1:323857/251‑2 (MQ=255)
                                                                  gttTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACgacg                                                                                                                                                                   >  1:180538/1‑248 (MQ=255)
                                                                  gttTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACgacg                                                                                                                                                                   >  1:618678/1‑248 (MQ=255)
                                                                            aTCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAAtta                                                                                                                                                                                                                                      >  1:857935/1‑172 (MQ=255)
                                                                            aTCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACcatca                                                                                                                                                                              >  1:272976/1‑230 (MQ=255)
                                                                            aTCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGa                                                                                                                                                         >  1:854231/1‑251 (MQ=255)
                                                                            aTCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGa                                                                                                                                                         >  1:17210/1‑251 (MQ=255)
                                                                            aTCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTCTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAAc                                                                                                                                                                                                                          <  1:342199/186‑1 (MQ=255)
                                                                               cTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCa                                                                                                                                                      >  1:401498/1‑251 (MQ=255)
                                                                               cTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCa                                                                                                                                                      >  1:550899/1‑251 (MQ=255)
                                                                                      accTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAAc                                                                                                                                                >  1:171629/1‑250 (MQ=255)
                                                                                      accTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAAc                                                                                                                                                >  1:597092/1‑250 (MQ=255)
                                                                                           acacAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCttttt                                                                                                                                          >  1:457632/1‑251 (MQ=255)
                                                                                             acaATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGc                                                                                                                                        <  1:501982/251‑1 (MQ=255)
                                                                                              caATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCa                                                                                                                                       >  1:594926/1‑251 (MQ=255)
                                                                                              caATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCa                                                                                                                                       >  1:211482/1‑251 (MQ=255)
                                                                                                aTTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAat                                                                                                                                     >  1:422609/1‑251 (MQ=255)
                                                                                                   atatTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAAcc                                                                                                                                                            >  1:132605/1‑225 (MQ=255)
                                                                                                       ttactcgagATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGtt                                                                                                                              <  1:150133/243‑1 (MQ=255)
                                                                                                          ctcgagATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAAt                                                                                                                           <  1:104960/246‑1 (MQ=255)
                                                                                                          ctcgagATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAAt                                                                                                                           >  1:593720/6‑251 (MQ=255)
                                                                                                              agATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGt                                                                                                                        <  1:538625/249‑1 (MQ=255)
                                                                                                                aTCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACga                                                                                                                                                                     >  1:898626/1‑202 (MQ=255)
                                                                                                                    ggCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGtt                                                                                                                              >  1:105483/1‑238 (MQ=255)
                                                                                                                     gcagcgATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTAc                                                                                                                 <  1:445950/250‑1 (MQ=255)
                                                                                                                         cgataatTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAAcg                                                                                                            <  1:374876/249‑2 (MQ=255)
                                                                                                                                                                   aaTTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGtt                                                                                                                              <  1:603678/191‑1 (MQ=255)
                                                                                                                                                                         cAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGAta                                                            <  1:818981/251‑2 (MQ=255)
                                                                                                                                                                               ctTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGAta                                                            >  1:557463/1‑244 (MQ=255)
                                                                                                                                                                               ctTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTa                                                      >  1:136815/1‑251 (MQ=255)
                                                                                                                                                                                   caagctttttttACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAggg                                                   <  1:813685/245‑1 (MQ=255)
                                                                                                                                                                                         ttttttACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTaa                                            >  1:286497/1‑251 (MQ=255)
                                                                                                                                                                                         ttttttACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTaa                                            >  1:834553/1‑251 (MQ=255)
                                                                                                                                                                                         ttttttACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTaa                                            <  1:247948/251‑1 (MQ=255)
                                                                                                                                                                                          tttttACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTg                                                                                                                         >  1:53035/1‑173 (MQ=255)
                                                                                                                                                                                          tttttACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTaa                                            >  1:170150/1‑250 (MQ=255)
                                                                                                                                                                                                ctCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTAACTaagat                                     <  1:258190/250‑4 (MQ=255)
                                                                                                                                                                                                  cTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACcat                                                                                                                                                                                <  1:893709/110‑1 (MQ=255)
                                                                                                                                                                                                       tGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTAACTAAGATATCAttt                              <  1:182602/251‑1 (MQ=255)
                                                                                                                                                                                                        gaacttACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAAcc                                                                  >  1:751771/5‑214 (MQ=255)
                                                                                                                                                                                                        gaacttACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTAAc                                           <  1:649862/233‑1 (MQ=255)
                                                                                                                                                                                                          acttACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTAACTAAGatat                                   <  1:46413/241‑1 (MQ=255)
                                                                                                                                                                                                           cttACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTAACTAAGATATCATTTATAg                          <  1:852340/250‑1 (MQ=255)
                                                                                                                                                                                                           cttACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTAACTAAGATATCATTTATAg                          <  1:366335/250‑1 (MQ=255)
                                                                                                                                                                                                             tACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTAACTAAGATATCATTTATAGTa                        >  1:834489/1‑251 (MQ=255)
                                                                                                                                                                                                                     gAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAAccc                                                                 <  1:460207/202‑1 (MQ=255)
                                                                                                                                                                                                                         tGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCAtt                                                       <  1:534121/208‑1 (MQ=255)
                                                                                                                                                                                                                         tGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTAACTAAGATATCATTTATAGTATCGTCAGCCacg            >  1:863456/1‑249 (MQ=255)
                                                                                                                                                                                                                              gtaccATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTAc                                                                                                                 <  1:133722/142‑1 (MQ=255)
                                                                                                                                                                                                                              gtaccATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGc                                                  >  1:6628/4‑208 (MQ=255)
                                                                                                                                                                                                                              gtaccATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGAAGTCGGGAGTCCACTAGTGGACTACCatcatc                                                                                                                                                                            >  1:566757/4‑86 (MQ=255)
                                                                                                                                                                                                                                  cATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTg                                                                                                                         <  1:322869/133‑1 (MQ=255)
                                                                                                                                                                                                                                   aTCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTAACTAAGATATCATTTATAGTATCg                     >  1:780385/1‑232 (MQ=255)
                                                                                                                                                                                                                                   aTCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTAACTAAGATATCATTTATAGTATCGTCAGCCACGAGATCCCGTa  >  1:705393/1‑251 (MQ=255)
                                                                                                                                                                                                                                   aTCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGACGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACGAATTCTTTATCAGTTTTTTCCAGAATACCGGCACGTTCAACCCAGATATCATTAGGGCCATTAACTAAGATATCATTTATAGTATCGTCAGCCACGAGATCCCGTa  >  1:823350/1‑251 (MQ=255)
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                    
GTATCTTCTAGTGTGATGACACGTTCGGTATGGGAAATATAGTTAGATAGCGCATTAAGTAAGGTTGTTTTACCAGATCCTGTACCACCTGACACAATTATATTTACCCGGGATCTGGCAGCAATAATTAAGAAATTCGCCATTTCGCGAGTCATAGAACCAAAATTTACAAGCTCTTGCAATGTTTTTTTATTCTTACTGAATTTACGAATAGAAATGGATGTGCCATCTAATGCAATCGGTGCAATAACAACATTTAAACGGCTGCCATCAGGTAGTCGGGAGTCCACTAGTGGACTACCATCATCAATACGGCGACCAACCCGAGCAACTAACCTTTTTGCAATATCAGTTAATTGTTCATTACTAACAAATTCTTTATCAGTTTTTTCCAGAATACCAGCACGTTCAACCCAGATGTCATTAGGGCCATTAACTAAAATATCATTTATAGTATCGTCAGCCATGAGATCTCGTA  >  1/855905‑856382

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑