| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 854,678 | A→G | intergenic (‑5021/‑67540) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Leu‑GAG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 854,678 | 0 | A | G | 97.4% | 201.9 / ‑5.8 | 78 | intergenic (‑5021/‑67540) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Leu‑GAG |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (33/43); total (35/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
ATGTTGACTTCCTCATCAACCACCAAATGATTCCCATACCGAAAAGTTCACTGCCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAATTGCATAAAGAAAAAGAAACCGACAGGAAAACACGCTACAATTATAGCTGACATTCTAGCCTCTGATGTCATTGCTTTCTTTTTCTTCTCCATTTTATTGCTATCGGCAATTACACGACCTAAACGGGAAATAACCTCGCGTATCTGTCCGCCTTTACTTAAGTTGGTGCGTACAATAGTTATGAAGAAATAGAATTCCTTATATGGGTAACGATCATAGCTGTCTTCAAAAACTGAAACAGGATCCTCGCCTATTGCAATACGCTTATGGATACTCTTAAACTCCTCACCTAATTGACCGGTAAGATCCTTACCGCAGCGTTCTAATGCTTGTAATAAGCC > 1/854437‑854905 | atGTTGACTTCCTCATCAACCACCAAATAATTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTaaa > 1:138757/1‑251 (MQ=255) gTTGACTTCCTCATCAACCACCAAATAATTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACg > 1:391118/1‑251 (MQ=255) ttGACTTCCTCATCAACCACCAAATAATTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACg < 1:365990/250‑1 (MQ=255) ttGACTTCCTCATCAACCACCAAATAATTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACg < 1:503148/250‑1 (MQ=255) cTTCCTCATCAACCACCAAATAATTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGaaa > 1:188476/1‑251 (MQ=255) tCCTCATCAACCACCAAATAATTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATa > 1:783647/1‑251 (MQ=255) atcaACCACCAAATAATTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCt > 1:885563/1‑250 (MQ=255) accaAATAATTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATc < 1:548936/251‑1 (MQ=255) ccaAATAATTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCt < 1:113323/251‑1 (MQ=255) ccaAATAATTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCt < 1:851693/251‑1 (MQ=255) aataaTTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCt > 1:830531/5‑239 (MQ=255) aataaTTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTc < 1:253743/247‑1 (MQ=255) ataaTTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTcc < 1:385853/248‑1 (MQ=255) aTTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTccacc < 1:162073/251‑4 (MQ=255) aTTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTccacc < 1:847926/251‑4 (MQ=255) aTTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTccac > 1:146792/1‑248 (MQ=255) aTTCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTccac > 1:442578/1‑248 (MQ=255) ttCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCGCGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTa < 1:381740/240‑1 (MQ=255) ttCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTcc > 1:497789/1‑247 (MQ=255) tCCCATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATCATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCtt < 1:568092/251‑1 (MQ=255) ccATACCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCtttg < 1:264799/251‑2 (MQ=255) aCCGAAAAGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATc < 1:244871/235‑1 (MQ=255) aaaaGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCtttgtttaaatt < 1:406210/251‑10 (MQ=255) aaaaGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCtttgtttaaatt < 1:869277/251‑10 (MQ=255) aaaaGCTCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCtttgtttaaatt < 1:379835/251‑10 (MQ=255) gctCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCtttgtttaaattagtg > 1:23726/3‑238 (MQ=255) ctCACTACCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCtttgtttaaattagtg < 1:165723/249‑14 (MQ=255) accAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCtttgtttaaatt < 1:394928/239‑10 (MQ=255) accAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACaa > 1:48413/2‑251 (MQ=255) accAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACaa > 1:30189/2‑251 (MQ=255) aaaaaCATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAg < 1:455380/251‑1 (MQ=255) aaaaaCATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAg < 1:428846/251‑1 (MQ=255) aaaaaCATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAg < 1:434424/251‑1 (MQ=255) aaaaaCATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAg < 1:493698/251‑1 (MQ=255) aaaaaCATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAg < 1:858964/251‑1 (MQ=255) aaaCATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTctacctttgtttaaatt > 1:307662/1‑219 (MQ=255) aaaCATAATAAAGCACGTATCTACCGGTAGGGCCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGtt > 1:416822/1‑251 (MQ=255) aCATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCtttgtttaaatt < 1:3581/233‑10 (MQ=255) cATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAAt > 1:198605/1‑244 (MQ=255) cATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATg > 1:414653/1‑251 (MQ=255) taataaAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATc < 1:114140/210‑1 (MQ=255) gCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTa > 1:155784/1‑201 (MQ=255) gCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTa > 1:829197/1‑240 (MQ=255) cGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATc > 1:202027/1‑200 (MQ=255) cGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACACGACCTAAACGAGAAATAAc > 1:450110/1‑190 (MQ=255) cGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACACGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATgaaaaagtaaaa > 1:427062/1‑241 (MQ=255) tCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATgaaaaagtaaaactc > 1:476528/1‑237 (MQ=255) cGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTatat > 1:753931/1‑251 (MQ=255) ggTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCt > 1:657641/1‑177 (MQ=255) ggTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATc < 1:892092/185‑1 (MQ=255) gTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTatat < 1:344959/244‑1 (MQ=255) attaattaAGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGAt < 1:638598/251‑1 (MQ=255) aattaaGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATAAGGGTAACGATCAt < 1:159390/251‑1 (MQ=255) ttaaGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAg < 1:252842/251‑1 (MQ=255) taaGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGc < 1:894751/251‑1 (MQ=255) aaGAAATCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCt < 1:122466/251‑1 (MQ=255) aaaTCAAAGTTTTCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAg > 1:880998/1‑205 (MQ=255) tttCCGGCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCTATCGTCaaaaa > 1:800048/1‑249 (MQ=255) gCATAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCTATCGTCAAAAACTgtagcg > 1:319564/1‑246 (MQ=255) aTAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCTATCGTCAAAAACTgtagcggg > 1:419918/1‑244 (MQ=255) aTAGCAAACTGCATAAAGAAAAAGAAACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGCCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCta > 1:666186/1‑230 (MQ=255) aaagaaaaagaaACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCTATCGTCAAAAACTgtagcggggtcctcccctatag < 1:89796/251‑22 (MQ=255) aaagaaaaagaaACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCTATCGTCAAAAACTgtagcggggtcctcccctatag < 1:12717/251‑22 (MQ=255) aaagaaaaagaaACCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCTATCGTCAAAAACTgtagcggggtcctcccctatag < 1:262085/251‑22 (MQ=255) aaaaagaaaCCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCTATCGTCAAAAACTgtagcggggtcctcccctatagag < 1:758549/249‑24 (MQ=255) aaaagaaaCCGACCGGAAAACATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACaa < 1:818790/165‑1 (MQ=255) aaCATGCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATgg > 1:881776/1‑178 (MQ=255) acatgCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTtata > 1:483872/5‑174 (MQ=255) catgCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATg > 1:831937/4‑175 (MQ=255) tgCTACGATTATAGCTGACATTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTatat > 1:810491/2‑172 (MQ=255) aTTCTGGCCTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCtttgtttaaatt < 1:75285/113‑10 (MQ=255) ccTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCtttgtttaaatt < 1:842338/106‑10 (MQ=255) ccTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATg > 1:413460/1‑147 (MQ=255) ccTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATg < 1:267094/147‑1 (MQ=255) ccTCTGATGTCATTGCTTTCTTTTTCTTTTCCATTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCTATCGTCAAAAACTGTAGCGGGGTCCTCCCCTATAGAGAGGCGTCTATGAATACTTTTGAACTCCTCGCCTAATTGACCTGTTAGATcc < 1:38079/251‑1 (MQ=255) aTTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCTATCGTCAAAAACTGTAGCGGGGTCCTCCCCTATAGAGAGGCGTCTATGAATACTTTTGAACTCCTCGCCTAATTGACCTGTTAGATCCTTACCGCAACGTTCCAATGCCTGTAATAAGcc < 1:213886/251‑1 (MQ=255) aTTTTATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCTATCGTCAAAAACTGTAGCGGGGTCCTCCCCTATAGAGAGGCGTCTATGAATACTTTTGAAATCCTCGCCTAATTGACCTGTTAGATCCTTACCGCAACGTTCCAATGCCTGTAATAAGcc < 1:573281/251‑1 (MQ=255) ttATTGCTATCCGCAATTACGCGACCTAAACGAGAAATAACCTCCCGTATCTGTCCACCTTTGTTTAAATTAGTGCGTACAATAGTTATGAAAAAGTAAAACTCCTTATATGGGTAACGATCATAGCt > 1:844472/1‑128 (MQ=255) | ATGTTGACTTCCTCATCAACCACCAAATGATTCCCATACCGAAAAGTTCACTGCCAAAAACATAATAAAGCACGTATCTACCGGTAGGGTCATTAATTAAGAAATCAAAGTTTTCCGGCATAGCAAATTGCATAAAGAAAAAGAAACCGACAGGAAAACACGCTACAATTATAGCTGACATTCTAGCCTCTGATGTCATTGCTTTCTTTTTCTTCTCCATTTTATTGCTATCGGCAATTACACGACCTAAACGGGAAATAACCTCGCGTATCTGTCCGCCTTTACTTAAGTTGGTGCGTACAATAGTTATGAAGAAATAGAATTCCTTATATGGGTAACGATCATAGCTGTCTTCAAAAACTGAAACAGGATCCTCGCCTATTGCAATACGCTTATGGATACTCTTAAACTCCTCACCTAATTGACCGGTAAGATCCTTACCGCAGCGTTCTAATGCTTGTAATAAGCC > 1/854437‑854905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |