Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 853,508 G→T intergenic (‑3851/‑68710) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Leu‑GAG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1853,5080GT100.0% 195.8 / NA 74intergenic (‑3851/‑68710)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (33/41);  total (33/41)

CTTGTAGAACTTTGGCCTTTTCACTTAACTGCCCACTGTTTGTTAGCAACGGCTGTAAATAGAGTAGAGATGAATTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGTGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTACTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTGAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCACAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACGCCTGGAGCTAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGATACTCATTTTTGCTGACAGCGTACCAAGCTTTTCTTCTATAGCTAATAATTGAATTTCTCTAATATCAGTCGATAGTTGAATTAATTGATGATAAAT  >  1/853264‑853754
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                      
cttgTAGAATTTTGGCCCTTTCACTTAACTGCCCGCTGTTTGTTAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTAc                                                                                                                                                                                                                                                   <  1:900333/250‑1 (MQ=255)
        attttGGCCCTTTCACTTAACTGCCCGCTGTTTGTTAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACa                                                                                                                                                                                                                                          >  1:791705/3‑251 (MQ=255)
                cctttCACTTAACTGCCCGCTGTTTGTTAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTaa                                                                                                                                                                                                                                  >  1:648776/3‑251 (MQ=255)
                 ctttCACTTAACTGCCCGCTGTTTGTTAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAAc                                                                                                                                                                                                                                 <  1:700887/250‑1 (MQ=255)
                   ttCACTTAACTGCCCGCTGTTTGTTAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAg                                                                                                                                                                                                                               <  1:662157/251‑1 (MQ=255)
                   ttCACTTAACTGCCCGCTGTTTGTTAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAg                                                                                                                                                                                                                               <  1:460884/251‑1 (MQ=255)
                    tCACTTAACTGCCCGCTGTTTGTTAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATATTTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTAcagc                                                                                                                                                                                                                                                >  1:346068/1‑233 (MQ=255)
                    tCACTTAACTGCCCGCTGTTTGTTAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTAc                                                                                                                                                                                                                                                   <  1:267253/230‑1 (MQ=255)
                         tAACTGCCCGCTGTTTGTTAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGa                                                                                                                                                                                                                         <  1:385054/251‑1 (MQ=255)
                         tAACTGCCCGCTGTTTGTTAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGa                                                                                                                                                                                                                         <  1:620848/251‑1 (MQ=255)
                           aCTGCCCGCTGTTTGTTAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATc                                                                                                                                                                                                                       <  1:887131/251‑1 (MQ=255)
                              gCCCGCTGTTTGTTAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATg                                                                                                                                                                                                                    >  1:245515/1‑251 (MQ=255)
                                       ttgttAGCAACGGCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAAt                                                                                                                                                                                                           <  1:100346/251‑1 (MQ=255)
                                                   gCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAAt                                                                                                                                                                                                           <  1:701171/239‑1 (MQ=255)
                                                   gCTGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAAc                                                                                                                                                                                                      <  1:112687/244‑1 (MQ=255)
                                                     tGTAAGTAGAGTAGAGATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAag                                                                                                                                                                                             <  1:145183/251‑1 (MQ=255)
                                                          gtagagtagagATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGcc                                                                                                                                                                                                                  <  1:826923/224‑1 (MQ=255)
                                                             gagtagagATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAg                                                                                                                                                                                     >  1:26574/1‑251 (MQ=255)
                                                                tagagATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGaa                                                                                                                                                                                   <  1:779480/250‑1 (MQ=255)
                                                                tagagATGAACTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGCGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGaa                                                                                                                                                                                   <  1:449320/250‑1 (MQ=255)
                                                                       gaactACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAg                                                                                                                                                                                                         >  1:505275/5‑221 (MQ=255)
                                                                       gaactACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGaa                                                                                                                                                                                   >  1:46744/5‑243 (MQ=255)
                                                                                tCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATAccc                                                                                                                                                                  <  1:75869/251‑1 (MQ=255)
                                                                                           gTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAg                                                                                                                                                                                                         <  1:771240/201‑1 (MQ=255)
                                                                                           gTAATAAATTTCAGATAATTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTAcac                                                                                                                                                         >  1:895961/1‑247 (MQ=255)
                                                                                                            aTTTATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTAc                                                                                                                                                                                                                                                   >  1:358929/1‑142 (MQ=255)
                                                                                                             tttATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTAc                                                                                                                                                                                                                                                   >  1:132451/1‑141 (MQ=255)
                                                                                                             tttATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGa                                                                                                                                                                                                                         <  1:212542/167‑1 (MQ=255)
                                                                                                             tttATAACGCGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAAt                                                                                                                                                                                                           >  1:529295/1‑181 (MQ=255)
                                                                                                                    cgcgtgAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGt                                                                                                                                                                                                                                    >  1:8650/4‑149 (MQ=255)
                                                                                                                     gcgtgAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTAcagcag                                                                                                                                                                                                                                              >  1:552512/3‑138 (MQ=255)
                                                                                                                     gcgtgAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAg                                                                                                                                                   >  1:237155/3‑229 (MQ=255)
                                                                                                                              gATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACataat                                                                                                                    >  1:233606/1‑251 (MQ=255)
                                                                                                                                tcttctTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAaat                                                                                                                                      >  1:775313/1‑231 (MQ=255)
                                                                                                                                        aTTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTAcagc                                                                                                                                                                                                                                                <  1:57038/117‑1 (MQ=255)
                                                                                                                                        aTTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAAt                                                                                                                                                                                                           <  1:497263/154‑1 (MQ=255)
                                                                                                                                        aTTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAAt                                                                                                           >  1:503693/1‑250 (MQ=255)
                                                                                                                                                   cATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTAcagcag                                                                                                                                                                                                                                              <  1:166120/108‑1 (MQ=255)
                                                                                                                                                     tCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAg                                                                                                                                                                                                         <  1:6432/143‑1 (MQ=255)
                                                                                                                                                     tCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAAc                                                                                                                         >  1:657900/1‑223 (MQ=255)
                                                                                                                                                       aCGATACATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACAt                                                                                                                                                                                                                                         <  1:686816/109‑1 (MQ=255)
                                                                                                                                                            aCATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTAcagcag                                                                                                                                                                                                                                              >  1:64051/1‑99 (MQ=255)
                                                                                                                                                            aCATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAAc                                                                                                                                                                                                                                           >  1:624924/1‑102 (MQ=255)
                                                                                                                                                            aCATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTAcacc                                                                                                                                                        >  1:333570/1‑182 (MQ=255)
                                                                                                                                                            aCATAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTAcac                                                                                                                                                         >  1:647849/1‑182 (MQ=255)
                                                                                                                                                              aTAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGccg                                                                                    >  1:763368/1‑249 (MQ=255)
                                                                                                                                                              aTAGTGATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGccg                                                                                    >  1:257845/1‑249 (MQ=255)
                                                                                                                                                               tAGTGATTTACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATaataaat                                                                                                                <  1:543240/222‑1 (MQ=255)
                                                                                                                                                                   gATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACATATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATaataaat                                                                                                                <  1:512030/218‑1 (MQ=255)
                                                                                                                                                                   gATTAACGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAggg                                                                                                    <  1:833460/230‑1 (MQ=255)
                                                                                                                                                                       aaCGCATCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAg                                                                                                                                                                                                                                     >  1:681127/1‑97 (MQ=255)
                                                                                                                                                                            aTCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAgt                                                                      <  1:250880/251‑2 (MQ=255)
                                                                                                                                                                             tCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGAt                                                                                                                                                                                                                             <  1:708315/99‑1 (MQ=255)
                                                                                                                                                                             tCGTTGTTGTTAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATAccc                                                                                                                                                                  <  1:707157/158‑1 (MQ=255)
                                                                                                                                                                                    tgttAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAAc                                                                                                                                                                                                      >  1:252357/1‑115 (MQ=255)
                                                                                                                                                                                    tgttAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAGTTTttcttc                                                              <  1:574929/251‑1 (MQ=255)
                                                                                                                                                                                    tgttAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCAGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTg                                                                                                                                                      <  1:757112/163‑1 (MQ=255)
                                                                                                                                                                                      ttAGTGCTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACCCATTTTTGCCGACAGTGTACCAAGTTTTTCTTCta                                                            >  1:855882/1‑251 (MQ=255)
                                                                                                                                                                                              ctGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAg                                                                                                      >  1:82055/1‑201 (MQ=255)
                                                                                                                                                                                                gATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAg                                                                       >  1:170070/1‑230 (MQ=255)
                                                                                                                                                                                                   aaaGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAGTTTTTCTTCTATAGCCAATAATTg                                               <  1:9263/251‑1 (MQ=255)
                                                                                                                                                                                                      gTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTAcacc                                                                                                                                                        <  1:149795/143‑4 (MQ=255)
                                                                                                                                                                                                      gTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAGTTTttcttc                                                              <  1:404035/233‑1 (MQ=255)
                                                                                                                                                                                                       tGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAGTTTTTCTTCTATAGCCAATAATTGAAt                                            <  1:484612/250‑1 (MQ=255)
                                                                                                                                                                                                                  cagcTAATTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAGTTTttcttc                                                              >  1:269651/1‑221 (MQ=255)
                                                                                                                                                                                                                       aaTTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAGTTTTTCTTCTATAGCCAATAATTGAATTTCTCTAATATCAGTCg                           >  1:567204/1‑251 (MQ=255)
                                                                                                                                                                                                                       aaTTTATCAGCACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAGTTTTTCTTCTATAGCCAATAATTGAATTTCTCTAATATCAGTCg                           <  1:250624/251‑1 (MQ=255)
                                                                                                                                                                                                                                 cACTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAGTTTTTCTTCTATAGCCAATAATTGAATTTCTCTAATATCAGTCGATAGCTGaac                 <  1:138701/251‑2 (MQ=255)
                                                                                                                                                                                                                                  aCTTAATGGTTTTTTATTTAGTACCGCAGAACATGCAGTAACAGATAAGATCATGCCTCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGTGACACTCATTTTTGCCGACAGTGTACCAAGTTTTTCTTCTATAGCCAATAATTGAATTTCTCTAATATCAGTCGATAGCTGaact                <  1:738981/251‑3 (MQ=255)
                                                                                                                                                                                                                                  aCTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAg                                                                                                              >  1:669373/1‑157 (MQ=255)
                                                                                                                                                                                                                                   cTTAATGGTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAg                                                                                                                                                                                                         >  1:22221/1‑65 (MQ=255)
                                                                                                                                                                                                                                          gTTTTTTATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAGTTTTTCTTCTATAGCCAATAATTGAATTTCTCTAATATCAGTCGATAGCTGaact                <  1:696888/243‑3 (MQ=255)
                                                                                                                                                                                                                                           ttttttATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAGTTTTTCTTCTATAGCCAATAATTGAATTTCTCTAATATCAGTCGATAGCTGAACTAGTtgatga       <  1:255279/251‑1 (MQ=255)
                                                                                                                                                                                                                                                tATTTAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCATAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACACCTGGAGCCAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGACACTCATTTTTGCCGACAGTGTACCAAGTTTTTCTTCTATAGCCAATAATTGAATTTCTCTAATATCAGTCGATAGCTGAACTAGTTGATGATAAAt  <  1:625426/251‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                      
CTTGTAGAACTTTGGCCTTTTCACTTAACTGCCCACTGTTTGTTAGCAACGGCTGTAAATAGAGTAGAGATGAATTACTGTCCCCTTTCTTGTAATAAATTTCAGATAATTTATAACGTGTGAGAGGATCTTCTTTATTTTTAAGTCCATCACGATACATAGTGATTAACGCATCGTTGTTGTTAGTACTCTGATAAAGTGCTTCTTTAGCAGCTAATTTATCAGCACTTAATGGTTTTTTATTGAGTACAGCAGAACATGCAGTAACAGATAAGATCATGCCGCACAATAGAACATTTTTAAGAGATTTAGAATACATGTGGAAATACCCTCATTACGCCTGGAGCTAGAATTAAAATAATAATTGGAAACATAATAAATAGAATCAAAGGGATACTCATTTTTGCTGACAGCGTACCAAGCTTTTCTTCTATAGCTAATAATTGAATTTCTCTAATATCAGTCGATAGTTGAATTAATTGATGATAAAT  >  1/853264‑853754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑