| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 119,058 | T→C | intergenic (–/+12076) | – / ← unknown | –/tRNA‑Ala‑GGC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 119,058 | 0 | T | C | 100.0% | 220.2 / NA | 79 | intergenic (–/+12076) | –/unknown | –/tRNA‑Ala‑GGC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (41/38); total (41/38) | |||||||||||
GGCAATTAACGGATATTTTCGTGCGCGACGGCAATCAAACGAACGACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGTCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCGTCGGCGGCTAAAGGCGCCAGCAGTGCTAAATCCTCGGCGAAATATTGTTTAAAATGAAT > 1/118824‑119300 | ggCAATTAACGGATATTTTCGTGCGCGACGGCAATCAAACGAACGACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCg > 1:29355/1‑250 (MQ=255) cAATTAACGGATATTTTCGTGCGCGACGGCAATCAAACGAACGACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCAc < 1:899932/251‑1 (MQ=255) cGTGCGCGACGGCAATCAAACGAACGACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCTACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAggg < 1:423897/251‑1 (MQ=255) cgcgACGGCAATCAAACGAACGACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGaa > 1:745499/1‑251 (MQ=255) cgACGGCAATCAAACGAACGACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGGATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAAc > 1:425652/1‑250 (MQ=255) cgACGGCAATCAAACGAACGACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAAc < 1:593430/250‑1 (MQ=255) cAATCAAACGAACGACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACAt < 1:380354/250‑1 (MQ=255) cAATCAAACGAACGACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACAt < 1:658063/250‑1 (MQ=255) aaTCAAACGAACGACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCt < 1:297606/251‑1 (MQ=255) aaTCAAACGAACGACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCt < 1:847367/251‑1 (MQ=255) aacgaacgACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAaat > 1:632295/1‑251 (MQ=255) aCATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCcgcg > 1:484038/1‑251 (MQ=255) cATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTttg > 1:67465/1‑212 (MQ=255) cATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAggg < 1:606415/224‑1 (MQ=255) cATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGa > 1:755348/1‑251 (MQ=255) cATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGa > 1:398418/1‑251 (MQ=255) cATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGa > 1:732897/1‑251 (MQ=255) acacCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGaaaa > 1:198645/1‑249 (MQ=255) cGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGc < 1:585584/251‑1 (MQ=255) ccaaagccaaagAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCtt < 1:831449/251‑1 (MQ=255) caaagccaaagAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTtg < 1:424176/251‑1 (MQ=255) ttGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACg < 1:748426/251‑1 (MQ=255) cAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAggg < 1:165573/185‑1 (MQ=255) cAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATc > 1:849788/1‑197 (MQ=255) aGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAggg > 1:575183/1‑184 (MQ=255) gCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCt < 1:490640/196‑1 (MQ=255) gCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGa > 1:33617/1‑251 (MQ=255) gCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGa > 1:527885/1‑251 (MQ=255) acCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAaca > 1:496891/1‑250 (MQ=255) gTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATAc < 1:888185/221‑1 (MQ=255) gTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAAt > 1:745475/1‑250 (MQ=255) gTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAAt > 1:168208/1‑250 (MQ=255) tGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAggg > 1:229033/1‑159 (MQ=255) tGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAaat < 1:41067/177‑1 (MQ=255) tGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATc < 1:514358/250‑1 (MQ=255) gAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATc < 1:365035/166‑1 (MQ=255) gAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATc > 1:129712/1‑176 (MQ=255) ggACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACg > 1:110749/1‑211 (MQ=255) gacagacaACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACAt > 1:870172/1‑159 (MQ=255) gacagacaACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATcaacaacgc < 1:40986/247‑4 (MQ=255) gacaACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTgg > 1:334478/1‑251 (MQ=255) gacaACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTgg > 1:314691/1‑251 (MQ=255) acaacaacaCCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGc < 1:171034/251‑1 (MQ=255) acaacaacaCCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGc < 1:608947/251‑1 (MQ=255) taacaacaCCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCg > 1:744302/2‑251 (MQ=255) caacaacaCCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAGTAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCg > 1:782936/1‑251 (MQ=255) caacaacaCCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAat > 1:420385/1‑223 (MQ=255) caacaacaCCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCg > 1:744310/1‑251 (MQ=255) caacaacaCCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGCGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCg > 1:687552/1‑251 (MQ=255) acacCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATAc < 1:873350/198‑1 (MQ=255) ccATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAggg < 1:132136/134‑1 (MQ=255) tGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGaaa < 1:730964/199‑1 (MQ=255) gAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTgttgttgtt < 1:544875/165‑1 (MQ=255) gAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTtgtg > 1:526467/1‑249 (MQ=255) aaCAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCtt > 1:362125/1‑251 (MQ=255) cAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGc < 1:642161/247‑1 (MQ=255) cAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCg > 1:472901/1‑251 (MQ=255) cTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCaa < 1:23933/251‑1 (MQ=255) cTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCaa > 1:345089/1‑251 (MQ=255) tAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAAc < 1:170076/251‑1 (MQ=255) aaaTCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAAcc < 1:322039/251‑1 (MQ=255) aaTCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAaat < 1:236890/121‑1 (MQ=255) aaTCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCg > 1:687619/1‑251 (MQ=255) agaaATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAaat > 1:285268/1‑114 (MQ=255) gtgtTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAaataa < 1:371870/108‑1 (MQ=255) gtgtTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAaat > 1:85574/1‑106 (MQ=255) gtgtTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCGTCGGCGGCTAAAgg > 1:754831/1‑250 (MQ=255) attTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACg > 1:252845/1‑137 (MQ=255) gCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCGTCGGCGGCTAAAGGCGCCAGCAGTGCTAAATc < 1:518221/250‑1 (MQ=255) gTTGATGAGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCGTcggc < 1:860538/219‑1 (MQ=255) tacgccaacaaaaGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCGTCGGCGGCTAAAGGCGCCAGCAGTGCTAAATCCTCgg > 1:192333/10‑250 (MQ=255) gatgaGAAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCGTCGGCGGCTAAAGGCGCCAGCAGTGCTAAATc < 1:34654/243‑1 (MQ=255) gagaAAAAGTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACgt > 1:367227/1‑123 (MQ=255) gTGCGGTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCGTCGGCGGCTAAAGGCGCCAGCAGTGCTAAAt > 1:142755/1‑231 (MQ=255) gTGGACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCGTCGGCGGCTAAAGGCGCCAGCAGTGCTAAATCCTCGGCGAAatat < 1:718266/240‑1 (MQ=255) ggACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACtg > 1:135412/1‑78 (MQ=255) ggACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCg < 1:466654/193‑1 (MQ=255) ggACATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCGTCGGCGGCTAAAGGCGCCAGCAGTGCTa < 1:277977/221‑1 (MQ=255) aCATTTGCCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCGTCGGCGGCTAAAGGCGCCAGCAGTGCTAAATCCTCGGCGAAATATTGTTTAAAATGAat < 1:386258/250‑1 (MQ=255) | GGCAATTAACGGATATTTTCGTGCGCGACGGCAATCAAACGAACGACATTTACACCGCACTTATCGCCAAAGCCAAAGAATTTGTCAGCTACACCCAATCCACCCGCTTGGTGATAGAACAGGACAGACAACAACACCATTTGCTGGAACAGGAAGGCTTCCGCTTAAATCCGAAGAAATCGGTGTTTGAATTGAATTTGGCAGGTTGATGAGAAAAAGTGCGGTGGACATTTGTCGTGAATTTCCACCGCACTTTTGTTGGCGTAAGGGCGAACCTACATCTTAAATAATCCGCGAAAACTGTTGTTGTTTTGCTTGTGCGCGGGAATACGTGTCGAAACACAAACAAATATTGCGAATCAACAAACGCCCTTTGGCGGAAACGGTGATTTGTGCTTCGCCGATGTCCAGCAAACCGTCGGCGGCTAAAGGCGCCAGCAGTGCTAAATCCTCGGCGAAATATTGTTTAAAATGAAT > 1/118824‑119300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |