| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 832,685 | T→C | intergenic (‑12008/+16896) | unknown ← / ← unknown | tRNA‑Thr‑TGT/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 832,685 | 0 | T | C | 100.0% | 208.9 / NA | 74 | intergenic (‑12008/+16896) | unknown/unknown | tRNA‑Thr‑TGT/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (41/33); total (41/33) | |||||||||||
AAACGTTCGGATAATTTGCGTGCGTGCATATGGAACATATCCCACGTCACAACATATTTTTCACTCATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGTCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAATTTTGCCACCGATCCGATTCAACCTTATAT > 1/832442‑832922 | aaaCGTTCGGATAATTTGCGTGCGTGCATATGGAACATATCCCACGTCACAACATATTTTTCACTCATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTccc < 1:124102/251‑1 (MQ=255) aTTTGCGTGCGTGCATATGGAACATATCCCACGTCACAACATATTTTTCACTCATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTAt > 1:132166/1‑250 (MQ=255) cATATGGAACATATCCCACGTCACAACATATTTTTCACTCATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGcc > 1:479411/1‑249 (MQ=255) atatGGAACATATCCCACGTCACAACATATTTTTCACTCATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGcc > 1:703664/1‑248 (MQ=255) gAACATATCCCACGTCACAACATATTTTTCACTCATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATc < 1:297569/232‑1 (MQ=255) tatCCCACGTCACAACATATTTTTCACTCATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGGATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCa > 1:723010/1‑251 (MQ=255) tCCCACGTCACAACATATTTTTCACTCATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATc < 1:556767/251‑1 (MQ=255) tCACAACATATTTTTCACTCATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAAtt < 1:305793/251‑1 (MQ=255) atTTTTCACTCATAAACACACCTTGTCTGAAACTCTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGcc < 1:137080/220‑1 (MQ=255) cTCATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTccc < 1:725193/188‑1 (MQ=255) cTCATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAg > 1:302945/1‑249 (MQ=255) cATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCGAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCttt > 1:427794/1‑251 (MQ=255) cATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAgg > 1:868684/1‑242 (MQ=255) cATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCttt > 1:389240/1‑251 (MQ=255) tAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTcc < 1:46529/183‑1 (MQ=255) tAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCttttt > 1:709631/1‑251 (MQ=255) tAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCttttt > 1:612713/1‑251 (MQ=255) aaCACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTa > 1:788492/1‑250 (MQ=255) aaCACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTAc < 1:630663/251‑1 (MQ=255) aaCACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTAc < 1:820349/251‑1 (MQ=255) acCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGa > 1:847390/1‑251 (MQ=255) gTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAAcgcg > 1:645226/1‑251 (MQ=255) gTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTCTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAAcgcg > 1:738592/1‑251 (MQ=255) cTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTGAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGAt < 1:431149/251‑1 (MQ=255) cccGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAACATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTaa < 1:425009/250‑1 (MQ=255) ccGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAAtt < 1:112371/251‑1 (MQ=255) tAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAAc > 1:565860/1‑250 (MQ=255) aGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTccc > 1:62434/1‑128 (MQ=255) ggATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCa > 1:841239/1‑251 (MQ=255) aCCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGt > 1:509092/1‑163 (MQ=255) aaaTGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGaaaaccg > 1:795578/1‑248 (MQ=255) aTTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGaa > 1:664788/1‑239 (MQ=255) tttATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGc < 1:598066/213‑1 (MQ=255) cTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAAtt < 1:801743/137‑1 (MQ=255) cTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGcc > 1:475732/1‑249 (MQ=255) cTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGcc > 1:132251/1‑249 (MQ=255) attattTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGaa < 1:53585/229‑1 (MQ=255) attTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAgg < 1:310990/251‑1 (MQ=255) ccTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGaa < 1:817302/221‑1 (MQ=255) ccTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCAt > 1:766033/1‑251 (MQ=255) ttAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCAttt < 1:221990/251‑1 (MQ=255) aTTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGcc < 1:279488/111‑1 (MQ=255) ttttttAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAGGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGat > 1:428213/1‑251 (MQ=255) tttttAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGc < 1:632817/190‑1 (MQ=255) tttttAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGata < 1:673164/251‑1 (MQ=255) ttttAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGatat < 1:458789/251‑1 (MQ=255) ttAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATTAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATgg < 1:292571/251‑1 (MQ=255) ggaggaAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGat > 1:879871/1‑243 (MQ=255) ggaAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGat < 1:339359/240‑1 (MQ=255) ggaAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCa > 1:327879/1‑251 (MQ=255) aaaTATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACgtg < 1:308188/169‑1 (MQ=255) aaaTATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAg > 1:323159/1‑251 (MQ=255) atGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGt > 1:567032/1‑76 (MQ=255) cAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGaa > 1:407352/1‑251 (MQ=255) tACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAg > 1:693494/1‑250 (MQ=255) aaCCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAAtt < 1:18496/251‑1 (MQ=255) aCCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGat > 1:315907/1‑213 (MQ=255) ccccGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAAtttt > 1:680515/1‑251 (MQ=255) aaTTTACTCTGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATTGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAATTTTGCCa < 1:447638/250‑1 (MQ=255) ctctGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGc > 1:203444/1‑98 (MQ=255) ctctGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAATTTTGCCAccgatc > 1:87352/1‑250 (MQ=255) ctctGGAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCGTGCATAATTTTGCCAccgatc > 1:860271/1‑250 (MQ=255) ggAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGata < 1:36101/198‑1 (MQ=255) ggAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAATTTTGCCa > 1:46792/1‑240 (MQ=255) ggAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAATTTTGCCACCGATCCGAtt > 1:305896/1‑251 (MQ=255) ggAAATGGTTCGATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAATTTTGCCACCGATCCGAtt > 1:35169/1‑251 (MQ=255) gATCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATgg > 1:403981/1‑190 (MQ=255) aTCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAATTTTGCCACCGATCCGATTCAACCTTatat < 1:173413/250‑1 (MQ=255) aTCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAATTTTGCCACCGATCCGATTCAACCTTatat < 1:570524/250‑1 (MQ=255) aTCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAATTTTGCCACCGATCCGATTCAACCTTatat < 1:444805/250‑1 (MQ=255) aTCAAATTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAATTTTGCCACCGATCCGATTCAACCTTatat < 1:893212/250‑1 (MQ=255) aaTTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCCACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGCAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAg > 1:713360/1‑203 (MQ=255) aaTTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGgcg < 1:263770/172‑1 (MQ=255) aaTTTGTGCCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGatat > 1:172765/1‑183 (MQ=255) | AAACGTTCGGATAATTTGCGTGCGTGCATATGGAACATATCCCACGTCACAACATATTTTTCACTCATAAACACACCTTGTCTGAAACTTTGCGGGCGCTGCCCGGGAAATAAAAATGGCGTTAGGATAACCCGAAATGGCATTTTATGCTATTATTTTCCTTAATTTTTTAAGGAGGAAATATGTCAGAAATACAAAAATTAACCCCGAATTTACTCTGGAAATGGTTCGATCAAATTTGTGTCATTCCCCATCCGTCTTATCAAGAAAATGCCCTGGCGGAATTCATCGTTAATTGGGCAAAAGGCAAAGCTTTTTACGCCGAACGCGATGAAGCGGGCAACGTGTTAATTCGCAAACCGGCAACAAAAGGCATGGAAAATCGCCGAAAAGTCGCCCTTCAGGCGCATTTGGATATGGTGCCGCAAGCCAACGAAGGCAGCTTGCATAATTTTGCCACCGATCCGATTCAACCTTATAT > 1/832442‑832922 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |