| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 699,045 | (A)6→7 | intergenic (+201492/‑298) | unknown → / → unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 699,039 | 1 | . | A | 100.0% | 189.4 / NA | 67 | intergenic (+201486/‑304) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (31/36); total (31/36) | |||||||||||
AATTTTTGCAACGTATCACTTGGCAACCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGAC‑AAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAAGATCTTCATCTATAATTTGCGGCCTTGCTTAATGCAAATGTTCTTTAACAATCAATCATACAAACTGTGTGGGCACTTATAGATTCGTTTTAAATGATTTTAAGATTGAACTTAATAGGT > 1/698802‑699273 | aaTTTTTGCAACGTATCACTTGGCAACCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTaaa > 1:456797/1‑251 (MQ=255) aCTTGGCAACCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGAC‑aaaaaaggcggtggtcttttgattcaaaag < 1:603642/251‑25 (MQ=255) cTTGGCAACCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTAt > 1:572746/1‑250 (MQ=255) cAACCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTA‑GCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATagag < 1:295248/251‑1 (MQ=255) aaCCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATagag < 1:648557/251‑1 (MQ=255) aCCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAgaga > 1:670756/1‑251 (MQ=255) gacgaTCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAgaga > 1:580755/1‑248 (MQ=255) ttctcCGCGGTGATTGCCGGTGTATTTCTTTATCCGCGCTATGTTTTCTACGATCGCATGATGATCCAACGTATTATGCGTATCACAGGCGGAGAAACGGATCGTACAAAAAAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCtat < 1:461388/250‑1 (MQ=255) ctcCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTataa < 1:34333/251‑1 (MQ=255) ctcCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTataa > 1:640584/1‑251 (MQ=255) cgcgGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATAc < 1:236722/251‑1 (MQ=255) cgcgGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATAc < 1:409018/251‑1 (MQ=255) cgGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGc < 1:559207/251‑1 (MQ=255) gtgtTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCAt > 1:829248/1‑251 (MQ=255) aTTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAggg < 1:290611/251‑1 (MQ=255) aTTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTGACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAggg < 1:452320/251‑1 (MQ=255) ttGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGc < 1:687822/251‑1 (MQ=255) gCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCa > 1:817245/1‑212 (MQ=255) cgcTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATAc > 1:440326/1‑220 (MQ=255) cgcTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAgg > 1:428418/1‑251 (MQ=255) cTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAAc < 1:893138/243‑1 (MQ=255) ggTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTataa > 1:332016/1‑211 (MQ=255) ggTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATAc > 1:710639/1‑214 (MQ=255) ttcttcGATCGCATGATGATCCAACTTATTATGCGTATAACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGGATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCATATCATAGAGATCCCTATGATAGACATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATaaa > 1:695446/1‑250 (MQ=255) cttcGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACaa > 1:232330/1‑251 (MQ=255) aTCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATag < 1:559600/189‑1 (MQ=255) cATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATAtttt > 1:759363/1‑250 (MQ=255) tgatgaTCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCtt > 1:728998/1‑251 (MQ=255) atgatCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATATGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAggg > 1:197182/1‑214 (MQ=255) atCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAgaga < 1:47818/181‑1 (MQ=255) aaCTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCCATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAAc < 1:60972/229‑1 (MQ=255) aCTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATagag > 1:249259/1‑175 (MQ=255) cTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTataa > 1:681257/1‑184 (MQ=255) cTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGc > 1:334980/1‑189 (MQ=255) cTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGAAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAggg > 1:628723/1‑205 (MQ=255) atGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCt < 1:839663/251‑1 (MQ=255) gCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCa < 1:229869/161‑1 (MQ=255) gCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCtt > 1:645083/1‑250 (MQ=255) gTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATAc < 1:280801/177‑1 (MQ=255) tATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATagag < 1:19947/163‑1 (MQ=255) tATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAAc > 1:705663/1‑201 (MQ=255) tATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATc < 1:24903/251‑1 (MQ=255) aTCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCtt < 1:654153/251‑1 (MQ=255) tCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGc < 1:834981/174‑1 (MQ=255) cTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCaa < 1:889771/169‑1 (MQ=255) ttACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAAt > 1:853011/1‑251 (MQ=255) tACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATg > 1:32343/1‑251 (MQ=255) aCAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATGc < 1:463494/251‑1 (MQ=255) aGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTaaa > 1:552590/1‑175 (MQ=255) gAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAggg < 1:154161/163‑1 (MQ=255) aaTATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATag > 1:426235/1‑123 (MQ=255) aaTATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCtt < 1:232654/233‑1 (MQ=255) aTTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATATTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACGAAATAGTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATGCAAATGTTCTTTAACaatcaatc < 1:269609/251‑1 (MQ=255) gTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATGc < 1:197924/218‑1 (MQ=255) cGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCAt < 1:464058/94‑1 (MQ=255) cGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCtt < 1:12986/206‑1 (MQ=255) ttttCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATGCAAATGTTCTTTAACAATCAATCATACAAACTGTGTGGGCAc < 1:125125/250‑1 (MQ=255) aaGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATGCAAATGTTCTTTAACAATCAATCATACAAACTGTGTGGGCACTtata < 1:372647/248‑1 (MQ=255) aaGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATGCAAATGTTCTTTAACAATCAATCATACAAACTGTGTGGGCACTTATAGAt < 1:256672/251‑1 (MQ=255) cGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATGCAAATGTTCTTTAACAATCAATCATACAAACTGTGTGGGCACTTATAGATTc < 1:617692/250‑1 (MQ=255) aagtaagtTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCt < 1:832462/151‑1 (MQ=255) gtaagtTGTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATGCAAATGTTCTTTAACAATCAATCATACAAACTGTGTGGGCACTTATAGATTCGTTTTAAATGATTTTAAGAtt > 1:819090/1‑251 (MQ=255) gTATTTTTTCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATGCAAATGTTCTTTAACAATCAATCATACAAACTGTGTGGGCACTTATAGATTCGTTTTAAATGATTTTAAGAt > 1:433639/1‑243 (MQ=255) ttttCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATGCAAATGTTCTTTAACAATCAATCATACAAACTGTGTGGGCACTTATAGATTCGTTTTAAATGATTTTAAGATTGAAc > 1:772768/1‑243 (MQ=255) tttCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATAc > 1:794006/1‑66 (MQ=255) tttCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAgg < 1:307627/97‑1 (MQ=255) tttCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATGCAAATGTTCTTTAACAATCAATCATACAAACTGTGTGGGCACTTATAGa < 1:287681/214‑1 (MQ=255) tttCTAAGCTATCGACAAAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAATATCTTCATCTATAATTTGCGGCCTTGCTTAATGCAAATGTTCTTTAACAATCAATCATACAAACTGTGTGGGCACTTATAGATTCGTTTTAAATGATTTTAAGATTGAACTTAATAGGt > 1:259269/1‑251 (MQ=255) | AATTTTTGCAACGTATCACTTGGCAACCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCGCTATGGTTTCTTCGATCGCATGATGATCCAACTTATTATGCGTATCACAGGCGGAGAAACGGATCTTACAAAAGAAATCGAATATACGGATTGGCAAAAAGTGCGGTCGTTTTCAGAAGCGTTTTTGCAGTTGAAATAAGTAAGTTGTATTTTTTCTAAGCTATCGAC‑AAAAAATGTAAAAATCCGCTTGATCCTATCATAGAGATCCCTATAATACGCATCCGCACTGCAAGGGCAGTAACTAAAGGAAAATAAACAAAATATTTTCTTGACGGCAAATAAGATCTTCATCTATAATTTGCGGCCTTGCTTAATGCAAATGTTCTTTAACAATCAATCATACAAACTGTGTGGGCACTTATAGATTCGTTTTAAATGATTTTAAGATTGAACTTAATAGGT > 1/698802‑699273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |