| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,336,030 | +C | intergenic (+176450/+84907) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,336,028 | 1 | . | C | 98.6% | 184.5 / ‑3.1 | 69 | intergenic (+176448/+84909) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (38/30); total (39/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 | |||||||||||
AGAAAAGCCTTTATTTAAAAAAAACATTCGTTAAAATGACCGCACTTTTCACTCATTCATTTAGGAAGGAACAAAATGAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AA‑CCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACCGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGTAACATTTCAATATACGGAGGAAGGCCCTGAAGGATTATTAACAGGCAAAAAAGC > 1/1335797‑1336257 | agaaaagCCTTTATTTAAAAAAAACATTCGTTAAAATGACCGCACTTTTCACTCATTCATTTAGGAAGGAACAAAATGAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCaa > 1:467361/1‑250 (MQ=255) gCCTTTATTTAAAAAAAACATTCGTTAAAATGACCGCACTTTTCACTCATTCATTTAGGAAGGAACAAAATGAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTAc > 1:390832/1‑236 (MQ=255) ccTTTATTTAAAAAAAACATTCGTTAAAATGACCGCACTTTTCACTCATTCATTTAGGAAGGAACAAAATGAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCgacgac < 1:789072/251‑1 (MQ=255) taAAAAAAACATTCGTTAAAATGACCGCACTTTTCACTCATTCATTTAGGAAGGAACAAAATGAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGgaag < 1:281617/251‑1 (MQ=255) aaaaaCATTCGTTAAAATGACCGCACTTTTCACTCATTCATTTAGGAAGGAACAAAATGAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGaaaa > 1:452934/1‑251 (MQ=255) ttAAAATGACCGCACTTTTCACTCATTCATTTAGGAAGGAACAAAATGAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTgg > 1:737915/1‑251 (MQ=255) cTCATTCATTTAGGAAGGAACAAAATGAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCg > 1:498425/1‑251 (MQ=255) cTCATTCATTTAGGAAGGAACAAAATGAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCg > 1:776270/1‑251 (MQ=255) cattcattTAGGAAGGAACAAAATGAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATc > 1:370914/1‑235 (MQ=255) cattTAGGAAGGAACAAAATGAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTAc > 1:615263/1‑185 (MQ=255) gAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACcg > 1:282662/1‑176 (MQ=255) gAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCAtt > 1:589683/1‑251 (MQ=255) acGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTatcat < 1:20172/251‑1 (MQ=255) cGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTatcatc < 1:412461/251‑1 (MQ=255) ttGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGc < 1:199630/251‑1 (MQ=255) gTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCg > 1:700284/1‑193 (MQ=255) gTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCg < 1:403149/193‑1 (MQ=255) gTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCa > 1:699017/1‑250 (MQ=255) tATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCAc < 1:265466/250‑1 (MQ=255) ttAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCActga < 1:298255/251‑4 (MQ=255) ttAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCActga < 1:636288/251‑4 (MQ=255) aaaaTCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATg > 1:8760/1‑251 (MQ=255) aTCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAAt > 1:515471/1‑198 (MQ=255) ccAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAacac < 1:594606/224‑1 (MQ=255) ccAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATaa < 1:396432/251‑1 (MQ=255) ccAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATaa < 1:535115/251‑1 (MQ=255) gTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTatcatc > 1:37728/1‑231 (MQ=255) gTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATaa < 1:456721/248‑1 (MQ=255) aTTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTa > 1:801858/1‑251 (MQ=255) cTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCTGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGtat < 1:448730/241‑1 (MQ=255) cTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAAt > 1:727525/1‑244 (MQ=255) cTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAata > 1:533218/1‑251 (MQ=255) cTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAata < 1:96800/251‑1 (MQ=255) tGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAatat < 1:341127/251‑1 (MQ=255) cAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCgacgac > 1:188382/1‑142 (MQ=255) gTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACcgac > 1:451459/1‑137 (MQ=255) gTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTatcatc < 1:76449/216‑1 (MQ=255) gTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTat < 1:321403/212‑1 (MQ=255) gTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCa > 1:616616/1‑251 (MQ=255) gTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCATACCCa > 1:213260/1‑251 (MQ=255) gTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AA‑cc > 1:266614/1‑116 (MQ=255) ttCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTAccc < 1:51510/249‑1 (MQ=255) ttCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTAccc < 1:171802/249‑1 (MQ=255) tCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCCGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCActga > 1:372298/1‑221 (MQ=255) ccAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCACGAC‑CCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAg > 1:595743/1‑251 (MQ=255) ccAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAAtt > 1:246759/1‑226 (MQ=255) ccAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAAt < 1:821162/225‑1 (MQ=255) atTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTAtttt > 1:756999/1‑251 (MQ=255) gATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTgg < 1:572243/140‑1 (MQ=255) gATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGACAACCGACGACAGCGGAAGAAAACGCATTATTGGCg > 1:60003/1‑142 (MQ=255) agcTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCgacgac < 1:537346/101‑1 (MQ=255) agcTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGt > 1:63265/1‑251 (MQ=255) cTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGTaa > 1:366602/1‑251 (MQ=255) ggCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTatca > 1:115430/1‑167 (MQ=255) ggCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGTAACAttt > 1:776473/1‑250 (MQ=255) aaaTATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTatcatc < 1:326198/164‑1 (MQ=255) aaaTATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATaa < 1:851609/181‑1 (MQ=255) aTCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCAc < 1:443702/154‑1 (MQ=255) aTCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATg > 1:270051/1‑159 (MQ=255) aTCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATg < 1:691875/159‑1 (MQ=255) aTCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGTAACATTTCAat > 1:415112/1‑232 (MQ=255) aTCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGTAACATTTCAATATACGGAGGAAGGc > 1:788540/1‑246 (MQ=255) aTCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGTAACATTTCAATATACGGAGGAAGGCCCTGa > 1:630541/1‑251 (MQ=255) ccccACTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGTAACATTTCAATATACGGAGGAAGGCCCTGAAGGATTATTAACAGGCaaaa > 1:569148/1‑251 (MQ=255) aCTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGTAACATTTCAATATACGGAGGAAGGCCCTGAAGGATTATTAACAGGCAAAAAAGc < 1:746668/251‑1 (MQ=255) cTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATaa > 1:31583/1‑139 (MQ=255) cTTTGGTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGTAACATTTCAATATACGGAGGAAGGCCCTGAAGGATTATTAACAGGCAAAAAAGc > 1:85524/1‑250 (MQ=255) gTGCCACTGCCAC‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGTAACa < 1:342941/195‑1 (MQ=255) ctgccac‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACTGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGTAACATTTCAATATAc < 1:681095/200‑1 (MQ=255) gccac‑AACCCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTat > 1:687617/1‑105 (MQ=255) | AGAAAAGCCTTTATTTAAAAAAAACATTCGTTAAAATGACCGCACTTTTCACTCATTCATTTAGGAAGGAACAAAATGAACAACGTTCTTGTATTAAAATCCAGTATTCTGGCAGACAGTTCACAAACCAATCAATTATCTGATTATTTGGAAAGCAAGCTTACAGGCAAAAATATCGCCGTGCGCGATCTTGCAGTAAATCAACTTCCCCACTTTGGTGCCACTGCCAC‑AA‑CCGCCCTACGCGGTCAACCGACGACAGCGGAAGAAAACGCATTATTGGCGTTATCTGATGAATTAGTCGCCGAAATTAAAAACGCAAACACCATTATCATCAATGCACCGATGTATAATTTTAATATCCCTACCCAATTAAAAAGCTATTTTGATTTCATTGCACGCCCTCGCGTAACATTTCAATATACGGAGGAAGGCCCTGAAGGATTATTAACAGGCAAAAAAGC > 1/1335797‑1336257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |