| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 960,544 | (C)8→9 | intergenic (+9970/+45621) | unknown → / ← unknown | tRNA‑Leu‑CAG/tRNA‑Lys‑TTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 960,536 | 1 | . | C | 96.1% | 135.4 / ‑1.3 | 51 | intergenic (+9962/+45629) | unknown/unknown | tRNA‑Leu‑CAG/tRNA‑Lys‑TTT |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base C (26/23); total (26/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GAGGAAGAGGTTGTGGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCC‑CCCC‑CTCAGGGCTTCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACGCGCGCTATCCCGCTTATGAACAAATATTTCACTTATCTTATCGCACTCATTTTCGGCGCTGCCGGCGT > 1/960302‑960766 | gaggaagaggTTGTGGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAggg > 1:825179/1‑250 (MQ=255) aggaagaggTTGTGGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGc < 1:529525/250‑1 (MQ=255) aggaagaggTTGTGGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGc < 1:724638/250‑1 (MQ=255) gtgGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGc < 1:560273/239‑1 (MQ=255) tgGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTc < 1:480671/250‑1 (MQ=255) cGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTccccc < 1:882293/251‑1 (MQ=255) ttcttTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGa < 1:590203/251‑1 (MQ=255) tcttTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGc < 1:693899/225‑1 (MQ=255) ccccTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAg > 1:746834/1‑251 (MQ=255) ctTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGc < 1:15764/215‑1 (MQ=255) ctTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAggg < 1:516605/243‑1 (MQ=255) ctTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAg > 1:288663/1‑251 (MQ=255) ctTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAAGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGGGCCAAg > 1:754041/1‑251 (MQ=255) gAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGttt > 1:730824/1‑249 (MQ=255) gagTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAagt < 1:63233/249‑1 (MQ=255) gagTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAag > 1:657752/1‑248 (MQ=255) gAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTAc < 1:52326/250‑1 (MQ=255) aaCGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACaa < 1:553490/251‑1 (MQ=255) cGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATg < 1:41699/251‑1 (MQ=255) cGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATg < 1:81856/251‑1 (MQ=255) cGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTCCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAAc < 1:425517/206‑1 (MQ=255) gTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGc < 1:293278/175‑1 (MQ=255) tctcCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGtt > 1:314580/1‑251 (MQ=255) tctcCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGtt < 1:876185/251‑1 (MQ=255) cccGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTc > 1:351018/1‑250 (MQ=255) gACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGc < 1:642876/159‑1 (MQ=255) gACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGc > 1:577318/1‑159 (MQ=255) caGCTGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTAc < 1:729028/218‑1 (MQ=255) aaaCATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAg > 1:570037/1‑222 (MQ=255) cATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTGCGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCCTCCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAAc < 1:40340/217‑1 (MQ=255) cATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAagt < 1:803778/199‑1 (MQ=255) cATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACGGCTGTGGtcgggaga > 1:894417/1‑226 (MQ=255) aTTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACGGCTGTGGtcgggag < 1:149800/231‑7 (MQ=255) ttATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGcc > 1:802416/1‑172 (MQ=255) ttATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAagta > 1:309034/1‑198 (MQ=255) ataATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGtt > 1:624899/1‑223 (MQ=255) ataATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGtt > 1:497779/1‑223 (MQ=255) taATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑ccc‑cccc‑cc > 1:672173/1‑128 (MQ=255) aaTTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGtt > 1:140671/1‑221 (MQ=255) atTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACGGCTGTGGtcgggag > 1:805056/1‑209 (MQ=255) ttttAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTc > 1:387442/1‑167 (MQ=255) gCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACaa > 1:170041/1‑175 (MQ=255) gCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTgaga > 1:3273/1‑251 (MQ=255) gTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAAt < 1:500474/219‑1 (MQ=255) gTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCC‑CCCCGCTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATg < 1:233502/154‑1 (MQ=255) ggATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACGCGCGCTATCCCGCTTATGAACAAATATTTCActtatct < 1:242776/250‑1 (MQ=255) gATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTCCCCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACGCGCGCTATCCCGCTTATGAACAAata > 1:207560/1‑238 (MQ=255) aTCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAAt > 1:459356/1‑192 (MQ=255) aTCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACgcgcgc > 1:20837/1‑211 (MQ=255) tGCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACGCGCGCTATCCCGCTTATGAACAAATATTTCACTTATCTTATCGCACTCATTTTCGGCGCTGCCGGCgt > 1:626301/1‑251 (MQ=255) gCTTAAAAATTGAGATTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGc > 1:791368/1‑134 (MQ=255) gagaTTTTC‑CCC‑CCCC‑CTCAGGGCTGCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACGCGCGCTATCCCGCTTATGAACAAATATTTCActtatctt > 1:219079/1‑210 (MQ=255) | GAGGAAGAGGTTGTGGCGTAGTTTCTTCTTTCCCCTCTTTAGAAAAGAGGGGCGGGGGGAGAGTTGAACGATAACGGTGGCGCGCGTCTCCCGACCACAGCCGTTCGAAACATTATAATTCATTGATATTTTTAAATATCTTGCCTTCCTCCGTTTACGGGCAAGGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATTTTTTCACAAGATCATGCTTAAAAATTGAGATTTT‑‑CCC‑CCCC‑CTCAGGGCTTCGCCCAGCTCCCCCTGTGAACGAGGGGAGCCAAGTTTTTTTTCTTTTTATATAAGTAGTTACAATGTTTCGAACAGCTGTGGTTTCCCGACGCGTGCCGTTTATTTCATTAAATAACGAAAATTTAGGAATTGCGTGAGAAAACGCGCGCTATCCCGCTTATGAACAAATATTTCACTTATCTTATCGCACTCATTTTCGGCGCTGCCGGCGT > 1/960302‑960766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |