| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,487,614 | Δ1 bp | intergenic (‑42986/‑154150) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,487,613 | 0 | G | . | 100.0% | 293.9 / NA | 69 | intergenic (‑42985/‑154151) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (30/39); total (30/39) | |||||||||||
ATTGGTCTTTTGACGAATACCTGGCGGCGATCCGAAGTGAGAGCTGTGGGAACTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTCATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAAGGCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACAAAACGCCAGTTTTTATCGGCACTTGGGTTTACGCTGCCTTCTTTCTCGC > 1/1487364‑1487854 | attGGTCTTTTGACGAATACCTGGCGGCGATCCGAAGTGAGAGCTGTGGGAACTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAAgc < 1:577667/251‑2 (MQ=255) gTCTTTTGACGAATACCTGGCGGCGATCCGAAGTGAGAGCTGTGGGAACTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAAgcatc > 1:597224/1‑246 (MQ=255) tttGACGAATACCTGGCGGCGATCCGAAGTGAGAGCTGTGGGAACTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACg > 1:527954/1‑251 (MQ=255) cTGGCGGCGATCCGAAGTGAGAGCTGTGGGAACTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCcttttgc < 1:700817/251‑1 (MQ=255) aTCCGAAGTGAGAGCTGTGGGAACTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGat < 1:772756/250‑1 (MQ=255) aGTGAGAGCTGTGGGAACTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTg > 1:245349/1‑250 (MQ=255) aGTGAGAGCTGTGGGAACTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTg > 1:266605/1‑250 (MQ=255) gTGAGAGCTGTGGGAACTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGc > 1:196845/1‑250 (MQ=255) tGAGAGCTGTGGGAACTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGcc < 1:592351/250‑1 (MQ=255) gCTGTGGGAACTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGc < 1:797048/222‑1 (MQ=255) cTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAAg > 1:786336/1‑198 (MQ=255) cTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGa > 1:874368/1‑251 (MQ=255) gCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCcttttgct < 1:6971/218‑1 (MQ=255) aGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACgg > 1:858907/1‑251 (MQ=255) aGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACgg > 1:463520/1‑251 (MQ=255) gCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGat > 1:412939/1‑208 (MQ=255) gCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACtt > 1:900211/1‑251 (MQ=255) gCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACtt > 1:850453/1‑251 (MQ=255) ctctATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATc < 1:149327/224‑1 (MQ=255) ctctATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACtt < 1:155128/250‑1 (MQ=255) ctctATATCAAGAGAAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACtt > 1:697535/1‑250 (MQ=255) gagaAAGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCa > 1:611386/1‑251 (MQ=255) aaaGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCAcc < 1:894398/250‑1 (MQ=255) aaaGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCAcc < 1:205231/250‑1 (MQ=255) aaaGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCAcc < 1:196947/250‑1 (MQ=255) aaaGATCCGAAAATGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAAGGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCAcc < 1:600894/250‑1 (MQ=255) aTGGAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCcttttgct > 1:513988/1‑174 (MQ=255) gAAGTTATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATAc < 1:363016/250‑1 (MQ=255) tCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGc < 1:849059/203‑1 (MQ=255) ccATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGt < 1:801918/251‑1 (MQ=255) cTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTGCTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGcc < 1:15512/251‑1 (MQ=255) tttCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATc > 1:137966/1‑185 (MQ=255) tttCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATAc < 1:839044/220‑1 (MQ=255) tttCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTgcg < 1:282718/224‑1 (MQ=255) tttCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGc > 1:162962/1‑249 (MQ=255) ggATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCgg > 1:437283/1‑192 (MQ=255) ggATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCa > 1:109167/1‑251 (MQ=255) gAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTg > 1:224225/1‑251 (MQ=255) agaAAAAGGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGttt < 1:538766/250‑1 (MQ=255) gaAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCa > 1:361162/1‑251 (MQ=255) aaaaGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAAcg < 1:794655/251‑1 (MQ=255) ggCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTa > 1:304024/1‑251 (MQ=255) gCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATAc < 1:576501/192‑1 (MQ=255) gCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCAt < 1:683645/151‑1 (MQ=255) gCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGtt > 1:324912/1‑251 (MQ=255) ttGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCAcc < 1:4609/160‑1 (MQ=255) ttGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGt < 1:46430/222‑1 (MQ=255) cGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGAt > 1:147506/1‑251 (MQ=255) cGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGAt < 1:641130/251‑1 (MQ=255) cGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGAt > 1:834830/1‑251 (MQ=255) tttGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATAc > 1:83682/1‑166 (MQ=255) tttGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATc < 1:785000/250‑1 (MQ=255) tttGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCCTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATc < 1:451246/250‑1 (MQ=255) tgtTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGcac < 1:517347/251‑1 (MQ=255) ccgccgGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAAttt < 1:720566/225‑1 (MQ=255) ccgccgGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACaaaa > 1:226564/1‑250 (MQ=255) ccgccgGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACAAAAc < 1:502754/251‑1 (MQ=255) ccgGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTc < 1:512509/204‑1 (MQ=255) gAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACAAAACGCCAGt > 1:289220/1‑251 (MQ=255) aataaAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAg < 1:527563/193‑1 (MQ=255) ataaAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATc < 1:157191/230‑1 (MQ=255) cATTCATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCaa < 1:158178/100‑1 (MQ=255) cATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATAc < 1:219529/134‑1 (MQ=255) cATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACAAAACGCCAGttt < 1:653624/236‑1 (MQ=255) cATAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACAAAACGCCAGTTTTTATCGGCACTTggg > 1:769746/1‑251 (MQ=255) tAAAAATGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGttt < 1:294308/122‑1 (MQ=255) aaaaaTGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACAAAACGCCAGTTTTTATCGGCACTTGGGttt < 1:107809/251‑1 (MQ=255) aaaaaTGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACAAAACGCCAGTTTTTATCGGCACTTGGGttt > 1:192063/1‑251 (MQ=255) aTGACCGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACAAAACGCCAGTTTTTATCGGCACTTGGGTTTACGc < 1:389726/251‑1 (MQ=255) ccGCACTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACAAAACGCCAGTTTTTATCGGCACTTGGGTTTACGCTGc > 1:296638/1‑250 (MQ=255) cTTTCGCGACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACAAAACGCCAGTTTTTATCGGCACTTGGGTTTACGCTGCcttctt > 1:661192/1‑251 (MQ=255) cgACAAAAAA‑GCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACAAAACGCCAGTTTTTATCGGCACTTGGGTTTACGCTGCCTTCTTTCTCGc < 1:385015/251‑1 (MQ=255) | ATTGGTCTTTTGACGAATACCTGGCGGCGATCCGAAGTGAGAGCTGTGGGAACTGCCATAGCTATTTGAAAGCTCTATATCAAGAGAAAGATCCGAAAATGGAAGTCATCGCCGACGATTTGGCGTCCATCTTTCTGGATATGGAAATGGAGAAAAAAGGCTTTATGAAAAGCGGCTTGAACCCGTTTGTGTTCCCGCCGGAATAATAAAAAACATTCATAAAAATGACCGCACTTTCGCGACAAAAAAGGCATCCAACGGATGCCTTTTGCTTTTGGATTATTTGCCCGATAAATCAATTTGATGTACGGCAAATCCTACTTCATCGGTGCCCACCTGTTTCATCGGATACTGCGCGTTTTCCTTGATGAATTGCGTTGCCTGCGCACTTGGTGAAGTTTCAACGCGTACATCTAATTTCGCGTTGCCTTTGATCGGCACAAAACGCCAGTTTTTATCGGCACTTGGGTTTACGCTGCCTTCTTTCTCGC > 1/1487364‑1487854 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |