| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,476,482 | 2 bp→AG | coding (300‑301/702 nt) | unknown ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,476,482 | 0 | G | A | 100.0% | 172.8 / NA | 63 | L101L (CTA→TTA) | unknown | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (26/37); total (26/37) | |||||||||||
| * | 1 | 1,476,483 | 0 | C | G | 100.0% | 177.2 / NA | 63 | R100R (CGG→CGC) | unknown | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (26/37); total (26/37) | |||||||||||
GTTTTCAACAGAACGACTGTCGCCCGCCAAGCCTTGCCGGCGTTTGCGTTCGTTGAGACGATCGCGAAAGTGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGATCGTCAAAAATCGTACGCGCCGACGCTTTGCCCACAATCTTCGACAACTCGTCATTGATCATATCTTTTAATAGCCGTTTTTCAAGGGCGGTAACACGTTTATCCGATTGCTTGCCCAATTCCGGTAACAAACAATATTCCAGGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCCGTGGAAATTTTGTATCTTGGATCCTGATATTTCGGTTCATGCGTGCGGCGGATGCTGAAAACGGCATGTTCTTCATCGTCATTATGCTGCACGGAAAAGGA‑CGGATAACTGGGCTCAAATTGCGGATAAGGATAATA > 1/1476243‑1476725 || gTTTTCAACGGAACGACTGTCACCCGCCAAGCCTTGACGGCGTTTACGTTCGTTGAGGCGATCGCGAAAATGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCaa > 1:826907/1‑251 (MQ=255) tCAACGGAACGACTGTCACCCGCCAAGCCTTGACGGCGTTTACGTTCGTTGAGGCGATCGCGAAAATGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGc < 1:350079/251‑1 (MQ=255) aCGACTGTCACCCGCCAAGCCTTGACGGCGTTTACGTTCGTTGAGGCGATCGCGAAAATGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAacac < 1:562384/251‑1 (MQ=255) aCTGTCCCCCGCCAAGCCTTGACGGCGTTTACGTTCGTTGAGGCGATCGCGAAAATGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGt < 1:558556/250‑1 (MQ=255) aCTGTCACCCGCCAAGCCTTGACGGCGTTTACGTTCGTTGAGGCGATCGCGAAAATGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGtt < 1:624029/251‑1 (MQ=255) aCTGTCACCCGCCAAGCCTTGACGGCGTTTACGTTCGTTGAGGCGATCGCGAAAATGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGt < 1:226126/250‑1 (MQ=255) ttcgttGAGGCGATCGCGAAAATGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCaacaaac < 1:347133/251‑1 (MQ=255) gaggcGATCGCGAAAATGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGt > 1:707499/5‑211 (MQ=255) ggcGATCGCGAAAATGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTc > 1:827179/3‑232 (MQ=255) aTCGCGAAAATGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGtt > 1:119193/1‑206 (MQ=255) cgAAAATGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTAtt > 1:254921/1‑251 (MQ=255) aaaatGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTAttt < 1:156926/246‑1 (MQ=255) cGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTaa > 1:49425/1‑251 (MQ=255) gCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGttcgtc < 1:239162/183‑5 (MQ=255) gCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGt > 1:129612/1‑178 (MQ=255) aTTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGt > 1:421098/1‑176 (MQ=255) tGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAAtt > 1:306521/1‑251 (MQ=255) gTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAggg > 1:63035/1‑149 (MQ=255) ttATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAAtttt > 1:823312/1‑251 (MQ=255) gTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGAt > 1:676342/1‑251 (MQ=255) ttgttgATACTTAAATTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGatat < 1:610534/250‑1 (MQ=255) aaaTTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCAtgcg < 1:195905/251‑1 (MQ=255) aaaTTGAAAATAATCGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCAtgcg < 1:869396/251‑1 (MQ=255) cGTAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTcc > 1:597034/1‑155 (MQ=255) tAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAAtt > 1:623237/1‑201 (MQ=255) tAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCAtgcg < 1:536522/235‑1 (MQ=255) tAAGAAGACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGcggcgggtg < 1:816875/246‑4 (MQ=255) aagaagACTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGaaa < 1:78169/251‑1 (MQ=255) gaagaCTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGaaaa > 1:22906/1‑250 (MQ=255) aagaCTGCTCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCTTGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGaaaaag > 1:186546/1‑249 (MQ=255) ctgctCGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCAt > 1:219933/5‑251 (MQ=255) cGTCAAAAATCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCAtttt > 1:408953/1‑246 (MQ=255) aaaaTCGTGCGCGCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCggca < 1:520153/121‑3 (MQ=255) tgcgcgCCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTa < 1:344240/249‑1 (MQ=255) cgcCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTAtgc < 1:14263/250‑1 (MQ=255) cgcCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTAtgc < 1:590613/250‑1 (MQ=255) cgcCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTAtgc < 1:485292/250‑1 (MQ=255) cgcCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTAtgc < 1:841660/250‑1 (MQ=255) cgcCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTAtgc < 1:663833/250‑1 (MQ=255) cgcCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTAtgc < 1:359877/250‑1 (MQ=255) cgcCGATGGTTTGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTAtgc < 1:311624/250‑1 (MQ=255) ccgatggtttGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTAtgc < 1:877428/241‑1 (MQ=255) tggtttGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACgg > 1:33720/4‑251 (MQ=255) gtttGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGGaa > 1:689318/2‑251 (MQ=255) gtttGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGGGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGGaa > 1:99062/2‑251 (MQ=255) tttGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGGaag < 1:585668/251‑2 (MQ=255) tttGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGGaag < 1:591671/251‑2 (MQ=255) tGCCCACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGGaaggg < 1:803649/251‑4 (MQ=255) ccACAATCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGGaagggacc < 1:735009/251‑7 (MQ=255) aTCTTCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTAtgc > 1:760806/1‑231 (MQ=255) ttCGCCAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGGaagggaccggataacc < 1:13011/251‑15 (MQ=255) tcgccAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGGaagggaccggataacca < 1:810757/247‑16 (MQ=255) gccAACTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTcc < 1:816754/97‑1 (MQ=255) aCTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTTCTGAAAACGGCCTTTTCTTCATCATTATTATGCTGCACGGaagggggcgga > 1:677864/1‑230 (MQ=255) cTCGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGt < 1:76159/52‑1 (MQ=255) cGTCATTGATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGGaagggaccggataaccaggttcaaat < 1:895388/251‑25 (MQ=255) gATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGat < 1:694235/152‑1 (MQ=255) gATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGGaagggaccggataacc < 1:155253/234‑15 (MQ=255) gATCATATCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGG‑AAGGGACCGGATAACCAGGGTCAAATTGCggat > 1:802080/1‑251 (MQ=255) atCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGG‑AAGGGACCGGATAACCAGGTTCAAATTGCggataaggat > 1:474733/1‑251 (MQ=255) tCTTTTAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGGaagggaccggataacca < 1:841763/228‑16 (MQ=255) ttttAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGTGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGG‑AAGGGACCGGATAACCAGGTTCAAATTGCGGATAAGGataat < 1:136211/251‑1 (MQ=255) tttAATAAGCGTTTTTCAAGGGCAGTAACACGTTCGTCCGATTGCTTGCCCAATTCCGGCAACAAACAATATTCCAAGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCTGTGGAAATTTTGTATCTCGGATCCTGATATTTCGGTTCATGCGTGCGGCGGGGGCTGAAAACGGCATTTTCTTCATCATCATTATGCTGCACGG‑AAGGGACCGGGTAACCAGGGTCAAATTGCGGATAAGGataata > 1:585978/1‑251 (MQ=255) || GTTTTCAACAGAACGACTGTCGCCCGCCAAGCCTTGCCGGCGTTTGCGTTCGTTGAGACGATCGCGAAAGTGCCGTTTCAAATCGCGGCATTCAAATTCACGAATGTTATTCACACCGTGATTGAGTTGTTGATACTTAAATTGAAAATAATCGTAAGAAGACTGATCGTCAAAAATCGTACGCGCCGACGCTTTGCCCACAATCTTCGACAACTCGTCATTGATCATATCTTTTAATAGCCGTTTTTCAAGGGCGGTAACACGTTTATCCGATTGCTTGCCCAATTCCGGTAACAAACAATATTCCAGGTTATTTTTGGCTAAAATGAATTTTTCCATGTCTTCCGTGGAAATTTTGTATCTTGGATCCTGATATTTCGGTTCATGCGTGCGGCGGATGCTGAAAACGGCATGTTCTTCATCGTCATTATGCTGCACGGAAAAGGA‑CGGATAACTGGGCTCAAATTGCGGATAAGGATAATA > 1/1476243‑1476725 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |