| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,475,337 | 2 bp→TA | coding (740‑741/1923 nt) | unknown ← | tRNA cytosine(34) acetyltransferase (EC 2.3.1.193) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,475,337 | 0 | C | T | 100.0% | 84.6 / NA | 32 | S247L (TCG→TTA) | unknown | tRNA cytosine(34) acetyltransferase (EC 2.3.1.193) |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (19/13); total (19/13) | |||||||||||
| * | 1 | 1,475,338 | 0 | G | A | 100.0% | 84.9 / NA | 32 | S247L (TCG→TTA) | unknown | tRNA cytosine(34) acetyltransferase (EC 2.3.1.193) |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (19/13); total (19/13) | |||||||||||
CAACAACAATTCATCAATAAAGCGCTCCAGTTTGTCATCCGCCTGCCAACGTAACGGGCTGAACAATTCAAAATGCCGCAAAGTGCGGTCGGTTTTCGTCATGAATTTTAACAAGAAGCCCCTGCCCGTGCCTTCGTAGCTGTGAATGGTGGTCGTCAGCACAATACGTTTAAAGGCAGTCGTTAAATCAAACAGCGTATCCAACGGAATCATCGCCGCTTCGTCCACAAATAACCACGAATCCGCAAATTGCTGTGGATTTTCACCAACCTTTTGGCGCAGTTCATCAGGTGGCATAAAGGGGATTTCGACACCGGAAAATTCATTGAAAATCTTGACCGCACTTTTGTTCGGCGCCGTCAATAGAACGGGCTTATTTGCCGCTAATTGCTGTTTGGCGAACAAGCCCGCCAAAGCGGATTTTCCCCGCCCGCGCTTTGCCGTAACGATTAACATCTCCGCGTCAGATGTCGCCATTTG > 1/1475100‑1475579 || caacaacaaTTCGTCAATAAAGCGCTCCAGTTTGTCATCCGCCTGCCAACGTAGCGGGCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAAtt > 1:772507/1‑251 (MQ=255) gtcaATAAAGCGCTCCAGTTTGTCATCCGCCTGCCAACGTAGCGGGCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGAtttt > 1:86345/2‑251 (MQ=255) tcaATAAAGCGCTCCAGTTTGTCATCCGCCTGCCAACGTAGCGGGCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGAtttt > 1:443041/1‑250 (MQ=255) aTAAAGCGCTCCAGTTTGTCATCCGCCTGCCAACGTAGCGGGCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCAc > 1:102530/1‑250 (MQ=255) cgcTCCAGTTTGTCATCCGCCTGCCAACGTAGCGGGCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCaatc < 1:766206/249‑3 (MQ=255) gTTTGTCATCCGCCTGCCAACGTAGCGGGCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCtttcgacg > 1:688801/1‑245 (MQ=255) tttGTCATCCGCCTGCCAACGTAGCGGGCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCtttcgacgc < 1:230114/250‑7 (MQ=255) gTCATCCGCCTGCCAACGTAGCGGGCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGtt > 1:210795/1‑251 (MQ=255) tGCCAACGTAGCGGGCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAgg > 1:260459/1‑248 (MQ=255) aaCGTAGCGGGCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTGTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAggcgatata < 1:580939/251‑8 (MQ=255) cGTAGCGGGCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAggcgatataaa > 1:552992/1‑242 (MQ=255) cGTAGCGGGCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAggcgatataaa > 1:513996/1‑242 (MQ=255) gggCTGAACAATTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAggcgatataaacg > 1:192737/1‑236 (MQ=255) ctattgacggcgctgaacaaaaGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTccg > 1:401924/20‑249 (MQ=255) aTTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAAtt > 1:819218/1‑186 (MQ=255) aTTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGt > 1:267978/1‑218 (MQ=255) aTTCAAAATGCCGAAAAGTGCGGTCGGTGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAgg > 1:440071/1‑226 (MQ=255) cggtcggtGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTAGCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAACCGGGATTTCCGCAGCGGCAAATTCATTGAAAAtat < 1:879924/250‑3 (MQ=255) gtcggtGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTg < 1:408353/250‑1 (MQ=255) gtcggtGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTg < 1:196735/250‑1 (MQ=255) gtcggtGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTg < 1:777083/250‑1 (MQ=255) gtcggtGTTCGCTATGAATTTTAACAAGAAGCCCCTGCCCGTAACCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTg < 1:872472/250‑1 (MQ=255) tcggtgttcgctaTGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTGAc < 1:265432/239‑1 (MQ=255) gtgttcgctaTGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTGACCg > 1:803534/10‑250 (MQ=255) gtgttcgctaTGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTGACCg > 1:348820/10‑250 (MQ=255) tGAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTGACCGCACTTTTGTTc < 1:856567/251‑1 (MQ=255) gAATTTTAACAAGAAGCCCCTGCCCGTACCCTCGTAACTGTGAATGGTCGTGGTCAGCACAATGCGTTTAAAGACGGCAGTTAAAGCAAACAGCGTATCCAACGGGATCATCGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTGACCGCACTTTTGTTca > 1:234747/1‑250 (MQ=255) atcatcGCCGCTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTGACCGCACTTTTGTTCAGCGCCGTCAATAGAACAGGCTGATTTGCTTCCAATTGCTGCTTGGCGAACAAGCCTGCCAAAGCGGATTTGCCCCGCCCACGCTTTGCCGTAACGATTAACAtctc < 1:694667/251‑1 (MQ=255) cgcTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTGACCGCACTTTTGTTCAGCGCCGTCAATAGAACAGGCTGATTTGCTTCCAATTGCTGCTTGGCGAACAAGCCTGCCAAAGCGGATTTGCCCCGCCCACGCTTTGCCGTAACGATTAACAtctctgcaccgg < 1:443875/251‑9 (MQ=255) gcTTCATCCACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTGACCGCACTTTTGTTCAGCGCCGTCAATAGAACAGGCTGATTTGCTTCCAATTGCTGCTTGGCGAACAAGCCTGCCAAAGCGGATTTGCCCCGCCCACGCTTTGCCGTAACGATTAACAtctctgcaccgga > 1:278547/1‑242 (MQ=255) ccACAAATAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTGACCGCACTTTTGTTCAGCGCCGTCAATAGAACAGGCTGATTTGCTTCCAATTGCTGCTTGGCGAACAAGCCTGCCAAAGCGGATTTGCCCCGCCCACGCTTTGCCGTAACGATTAACATCTCTGCACCGGATGTCGcc < 1:68449/251‑1 (MQ=255) aaTAACCATAAATCCGCAAATTGCTGCGGATTTTCACCAATCTTTCGACGCAGTTCATCAGGCGATATAAACGGGATTTCCGCAGCGGCAAATTCATTGAAAATATTGACCGCACTTTTGTTCAGCGCCGTCAATAGAACAGGCTGATTTGCTTCCAATTGCTGCTTGGCGAACAAGCCTGCCAAAGCGGATTTGCCCCGCCCACGCTTTGCCGTAACGATTAACATCTCTGCACCGGATGTCGCCATTTg > 1:834540/1‑251 (MQ=255) || CAACAACAATTCATCAATAAAGCGCTCCAGTTTGTCATCCGCCTGCCAACGTAACGGGCTGAACAATTCAAAATGCCGCAAAGTGCGGTCGGTTTTCGTCATGAATTTTAACAAGAAGCCCCTGCCCGTGCCTTCGTAGCTGTGAATGGTGGTCGTCAGCACAATACGTTTAAAGGCAGTCGTTAAATCAAACAGCGTATCCAACGGAATCATCGCCGCTTCGTCCACAAATAACCACGAATCCGCAAATTGCTGTGGATTTTCACCAACCTTTTGGCGCAGTTCATCAGGTGGCATAAAGGGGATTTCGACACCGGAAAATTCATTGAAAATCTTGACCGCACTTTTGTTCGGCGCCGTCAATAGAACGGGCTTATTTGCCGCTAATTGCTGTTTGGCGAACAAGCCCGCCAAAGCGGATTTTCCCCGCCCGCGCTTTGCCGTAACGATTAACATCTCCGCGTCAGATGTCGCCATTTG > 1/1475100‑1475579 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |