| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 876,420 | T→C | G48G (GGT→GGC) | unknown → | CRISPR‑associated protein Cas1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 876,420 | 0 | T | C | 100.0% | 206.3 / NA | 73 | G48G (GGT→GGC) | unknown | CRISPR‑associated protein Cas1 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (38/35); total (38/35) | |||||||||||
AACTATCCCCAAGTTTTGAAGAAAAAATCAGAAAAATATATCAATAATCAAAATTATAATTGCTAGTTAATTGAAGTAAGAAAAATTTTAGGAGCCACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGTAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGCCGATTGCGCGCAATATCATCGCGGCGAAGATTCAGGCGAGTAAGCGGGTGCTGCAGCGGCAAATTCGCAATTATGGGG > 1/876177‑876664 | aaCTATCCCCAAGTTTTGAAGAAAAAATCAGAAAAATATATCAATAATCAAAATTATAATTGCTAGTTAATTGAAGTAAGAAAAATTTTAGGAGCCACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGc < 1:538941/251‑1 (MQ=255) tCCCCAAGTTTTGAAGAAAAAATCAGAAAAATATATCAATAATCAAAATTATAATTGCTAGTTAATTGAAGTAAGAAAAATTTTAGGAGCCACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGgtg > 1:167778/1‑251 (MQ=255) taatCAAAATTATAATTGCTAGTTAATTGAAGTAAGAAAAATTTTAGGAGCCACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTc < 1:90892/251‑1 (MQ=255) atCAAAATTATAATTGCTAGTTAATTGAAGTAAGAAAAATTTTAGGAGCCACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCaa < 1:377935/251‑1 (MQ=255) cAAAATTATAATTGCTAGTTAATTGAAGTAAGAAAAATTTTAGGAGCCACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATc < 1:669815/251‑1 (MQ=255) aaaTTATAATTGCTAGTTAATTGAAGTAAGAAAAATTTTAGGAGCCACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTtctc > 1:163381/1‑218 (MQ=255) aaTTATAATTGCTAGTTAATTGAAGTAAGAAAAATTTTAGGAGCCACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTgg > 1:778018/1‑251 (MQ=255) aGTTAATTGAAGTAAGAAAAATTTTAGGAGCCACCCATGCGGAAACTGCAAAACACGCTCTCTATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAAc > 1:831301/1‑225 (MQ=255) aaTTGAAGTAAGAAAAATTTTAGGAGCCACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAAc < 1:96747/251‑1 (MQ=255) aaTTTTAGGAGCCACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTgggg > 1:375796/1‑251 (MQ=255) cACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAgggg < 1:206991/251‑1 (MQ=255) cACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAgggg < 1:651043/251‑1 (MQ=255) cccATGCGGAAACTGCAAAACACGCTTTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATg < 1:435619/196‑1 (MQ=255) cccATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGggcg > 1:587145/1‑251 (MQ=255) cccATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGggcg > 1:24168/1‑251 (MQ=255) gCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAAtg > 1:597332/1‑251 (MQ=255) acacGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAAtgtg > 1:774773/1‑248 (MQ=255) cGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGgtg > 1:862155/1‑137 (MQ=255) ctctATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATc > 1:28870/1‑178 (MQ=255) ctctATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGtgc < 1:584219/244‑1 (MQ=255) ctctATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTgcg > 1:88021/1‑251 (MQ=255) ctATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATg > 1:469466/1‑170 (MQ=255) ctATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGtgctgctg > 1:329735/1‑247 (MQ=255) ctATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTgcgg > 1:755518/1‑250 (MQ=255) ctATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTgcgg < 1:729311/250‑1 (MQ=255) ctATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTgcgg > 1:727654/1‑250 (MQ=255) ctATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTgcgg > 1:726135/1‑250 (MQ=255) tataTCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTgcggcg < 1:877834/251‑1 (MQ=255) atatCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGcggcgg > 1:441669/1‑251 (MQ=255) tCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAggg > 1:505747/1‑217 (MQ=255) tCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCggcggggg > 1:541552/1‑249 (MQ=255) tCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCggcgggcg > 1:885659/1‑251 (MQ=255) acTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGt < 1:86613/161‑1 (MQ=255) gggCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATc > 1:57381/1‑161 (MQ=255) gggCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGGGCAGGATCggg > 1:68692/1‑251 (MQ=255) gCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCgg > 1:504375/1‑217 (MQ=255) gCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGgt < 1:675002/250‑1 (MQ=255) ttATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCCGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGgtgt < 1:379557/248‑1 (MQ=255) tCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCGGTATCggggggcggggg > 1:685749/1‑242 (MQ=255) gCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCt < 1:243045/150‑1 (MQ=255) gCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGGGCAGTATCGGGGGGCGGGGCaaa > 1:157883/1‑251 (MQ=255) gCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGGGCAGGATCGGGGGTCggggggaa > 1:402064/1‑245 (MQ=255) aTAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAAc < 1:634242/251‑1 (MQ=255) tAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAAcc < 1:616514/251‑1 (MQ=255) gAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACaa > 1:770489/1‑134 (MQ=255) gAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGGGCCGGATCGGGGGGCGGGGGAAAAccccgt > 1:702940/1‑248 (MQ=255) cGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGc < 1:82897/250‑1 (MQ=255) cGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGc < 1:256137/250‑1 (MQ=255) cGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGc < 1:719449/250‑1 (MQ=255) cGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGGATCGGGGGTCGGGGGAAAAcaccgtgc > 1:874726/1‑243 (MQ=255) cGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCggcgggc > 1:576926/1‑211 (MQ=255) tGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGCCGATTgcgcgc < 1:488912/251‑1 (MQ=255) tGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCAGTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCCGGATCGGGGGGCGGGGGAAAAACCCGTGCCGGTTgcgcg > 1:45845/1‑250 (MQ=255) tAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGc < 1:18100/237‑1 (MQ=255) gTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGGGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGCATCCGGGGGCGGGGCAAAAACCCGTGCCGGGTGCGCGCCatat > 1:77093/1‑251 (MQ=255) tGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGCCGATTGCGCGCAATatc < 1:420032/251‑1 (MQ=255) gAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAAtgt < 1:363734/185‑1 (MQ=255) aGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGCCGATTGCGCGCAATatcat < 1:567123/250‑1 (MQ=255) aGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGCCGATTGCGCGCAATatcat < 1:884962/250‑1 (MQ=255) aGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGCCGATTGCGCGCAATatcat < 1:409690/250‑1 (MQ=255) gAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGtgctgctg > 1:609302/1‑186 (MQ=255) gTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTaa < 1:196742/164‑1 (MQ=255) aaCTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGCCGATTGCGCGCAATATCATCGCGGCGAAGATTCAGGCGAGTAAg < 1:693643/251‑1 (MQ=255) ccGGTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGCCGATTGCGCGCAATATCATCGCGGCGAAGATTCAGGCGAGTAAGCggg < 1:393163/250‑1 (MQ=255) gTGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCggg < 1:765756/178‑1 (MQ=255) tGCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGCCGATTGCGCGCAATATCATCGCGGCGAAGATTCAGGCGAGTAAGCGGGtgctg < 1:748440/251‑1 (MQ=255) gCATTCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGGGGCGGGGCAAAACCCCCTGCCGGTTGCGCGCAATATCATCGCGGCGAAGATTCAGGCGGGGAAGCggggggtg > 1:883339/1‑245 (MQ=255) ttCCATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGtgc > 1:506199/1‑149 (MQ=255) ccATCGGACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAAc < 1:768418/185‑1 (MQ=255) ggACATATTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAAccc < 1:723418/182‑1 (MQ=255) gacttatTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGGGCAGGATCGGGGGGCGGGGGAAAAACCCGTGCCGGTTGGGCGCCATATCATCGCGGCGGAGAATTAGGCGAGGAAACggggggccggctcttttaca > 1:300776/5‑234 (MQ=255) tatTTTCTGTTTCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGGGTGGGGGGAAAAACCCGTGCCGATTGCGCGCAAAATCATCGCGGGGGAGAATCAGGGGGGGAAGCGGGGGCTGCAGCGGcgaaaatgc > 1:128114/1‑242 (MQ=255) tttCGGCAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGCCGATTGCGCGCAATATCATCGCGGCGAAGATTCAGGCGAGTAAGCGGGTGCTGCAGCGGCAAATTCGCAATTATgggg < 1:422577/251‑1 (MQ=255) | AACTATCCCCAAGTTTTGAAGAAAAAATCAGAAAAATATATCAATAATCAAAATTATAATTGCTAGTTAATTGAAGTAAGAAAAATTTTAGGAGCCACCCATGCGGAAACTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGGAGCGGGAGACGTTGGTAGTGGAGCAGGAAAAGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGACATATTTTCTGTTTCGGTAATGTGCTGGTGTCGCCGTTTCTCTTGGGATTTTGCGGGGAGAACAATGTCAATCTGGCGTTTTTTACCGAAAACGGGCGTTTCTTGGGGCGGCTTCAGGGGCGGCAAAGCGGTAATGTGCTGCTGCGGCGGGCGCAGTATCGGGTGTCGGAGCAAAACCCTGTGCCGATTGCGCGCAATATCATCGCGGCGAAGATTCAGGCGAGTAAGCGGGTGCTGCAGCGGCAAATTCGCAATTATGGGG > 1/876177‑876664 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |