Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	855,335	G→A	L204V (TTG→GTA)	unknown →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	855,335	0	G	A	100.0%	212.0 / NA	74	L204V (TTG→GTA)	unknown	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (45/29);  total (45/29)

CATTGTCACTACCGTGTTTTCGGGCCTTATCAGCTGCTATAACGCATACCCTAAAAAGCACAGCTACCGGGTGCGCCGTGCCCACAAAGGCTGGCACAATGGCGTGGTATGGTACGCCGAAAAAGCCAAAATCCTGCTGCGCAATGACAATCTTAAAATTAAAGGTTTGACAGCCGAACAAGAACAAAATGTACGCCAAATCCACGCCATGAACCCGGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCAGAGCTGGATTTAGACAGCTATAAAAAAGCGGCAGATACGCTTTTCGATGAGGGATTTGGCCTCTGTATCCGCTACAACCGGCAAACCTCCATTAAAGATTTTATTAAGCAAATTGT  >  1/855167‑855559                                                                                                                                                                         |                                                                                                                                                                                                                                 cATTGTCACTACTGTGTTTTCAGGCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGc                                                                                                                                              <  1:936/250‑1 (MQ=255) cATTGTCACTACTGTGTTTTCAGGCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGc                                                                                                                                              <  1:705772/250‑1 (MQ=255)  aTTGTCACTACTGTGTTTTCAGGCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATaaa                                                                                                                                                 <  1:693491/246‑1 (MQ=255)    tGTCACTACTGTGTTTTCAGGCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGc                                                                                                                                              >  1:381427/1‑247 (MQ=255)    tGTCACTACTGTGTTTTCAGGCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTggg                                                                                                                                          >  1:148821/1‑251 (MQ=255)    tGTCACTACTGTGTTTTCAGGCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTggg                                                                                                                                          >  1:840566/1‑251 (MQ=255)    tGTCACTACTGTGTTTTCAGGCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTggg                                                                                                                                          >  1:39040/1‑251 (MQ=255)         cTACTGTGTTTTCAGGCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTGCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCTCATATCCTGGTTGAATGCGCCACTAATAAAAGc                                                                                                                                              >  1:163371/1‑242 (MQ=255)         cTACTGTGTTTTCAGGCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGc                                                                                                                                              >  1:582862/1‑242 (MQ=255)              gtgtTTTCAGGCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCaaaaa                                                                                                                                >  1:847608/1‑251 (MQ=255)              gtgtTTTCAGGCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCaaaaa                                                                                                                                >  1:570486/1‑251 (MQ=255)                  tttCAGGCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGa                                                                                                                             >  1:316830/1‑250 (MQ=255)                   ttcaggCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACt                                                                                                                           <  1:247708/247‑1 (MQ=255)                       ggCCTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTAt                                                                                                                        >  1:23902/1‑250 (MQ=255)                          cTTATCAGTTGCTATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATccga                                                                                                                    >  1:879461/1‑248 (MQ=255)                                    gctATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTa                                                                                                          >  1:11148/1‑251 (MQ=255)                                     ctATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAg                                                                                                         >  1:487576/1‑251 (MQ=255)                                     ctATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAg                                                                                                         >  1:510612/1‑251 (MQ=255)                                     ctATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAg                                                                                                         >  1:241348/1‑251 (MQ=255)                                     ctATAACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAAACTTATCCGAGCTGGATTTAg                                                                                                         >  1:870074/1‑251 (MQ=255)                                       ataACGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGAc                                                                                                       <  1:876568/251‑1 (MQ=255)                                         aaCGCTTACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAg                                                                                                     >  1:490477/1‑251 (MQ=255)                                           cgcttACCCTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGc                                                                                                                                              >  1:78965/5‑208 (MQ=255)                                                 cccTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACaaaa                                                                                             >  1:632450/1‑251 (MQ=255)                                                   cTAAAAAACACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACaaaaaa                                                                                           >  1:432391/1‑251 (MQ=255)                                                     aaaaaaCACAGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATTACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAg                                                                                          >  1:724342/1‑250 (MQ=255)                                                        aaacacaGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCgg                                                                                       >  1:410924/4‑250 (MQ=255)                                                          acacaGCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCgg                                                                                       >  1:528457/2‑248 (MQ=255)                                                               gCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGc                                                                                                                                              >  1:107733/1‑188 (MQ=255)                                                               gCTACCGTCTGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGAc                                                                                                       >  1:385703/1‑227 (MQ=255)                                                                    cgtctGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGa                                                                                                        <  1:263204/217‑1 (MQ=255)                                                                    cgtctGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACtttt                                                                          >  1:159898/5‑251 (MQ=255)                                                                     gtctGCGCCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACtttt                                                                          >  1:193367/4‑250 (MQ=255)                                                                          cgcCGTGCCCTCAAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGacg                                                                     <  1:80101/250‑3 (MQ=255)                                                                                   ctcaAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGc                                                                                                                                              >  1:212888/3‑168 (MQ=255)                                                                                     caAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGAttcgggt                                                         <  1:852080/251‑6 (MQ=255)                                                                                     caAAGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGAttcgggt                                                         <  1:259196/251‑6 (MQ=255)                                                                                        aGGCTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGAttcgggttgt                                                      >  1:310029/1‑243 (MQ=255)                                                                                           cTGGCACAATGG‑‑‑GGTATGGTACCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGAttcgggttgtgt                                                    <  1:162616/250‑11 (MQ=255)                                                                                                 gcacaatggggtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGAttcggg                                                          >  1:356017/10‑237 (MQ=255)                                                                                                    caatggggtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCt                                             <  1:847849/245‑1 (MQ=255)                                                                                                      atggggtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTAc                                           <  1:427959/247‑1 (MQ=255)                                                                                                        ggggtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATcc                                                                                                                      <  1:130671/172‑2 (MQ=255)                                                                                                        ggggtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATAca                                                                               <  1:881058/211‑2 (MQ=255)                                                                                                        ggggtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACaa                                         >  1:613288/3‑251 (MQ=255)                                                                                                        ggggtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACaa                                         >  1:578759/3‑251 (MQ=255)                                                                                                         gggtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGAc                                                                                                       >  1:130852/2‑188 (MQ=255)                                                                                                         gggtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACaat                                        >  1:644129/2‑250 (MQ=255)                                                                                                          ggtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGac                                                                      <  1:17939/220‑2 (MQ=255)                                                                                                          ggtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACaat                                        >  1:861551/1‑249 (MQ=255)                                                                                                           gtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGAttcgggttgtgt                                                    <  1:838638/237‑11 (MQ=255)                                                                                                           gtatggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACaatc                                       <  1:386890/250‑3 (MQ=255)                                                                                                             atggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATccg                                                                                                                     <  1:308402/170‑3 (MQ=255)                                                                                                             atggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTa                                            <  1:812226/243‑1 (MQ=255)                                                                                                             atggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCgg                                     >  1:730376/1‑250 (MQ=255)                                                                                                             atggtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGCAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCgg                                     >  1:389850/1‑250 (MQ=255)                                                                                                                gtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACaaaa                                                                                             <  1:895310/191‑1 (MQ=255)                                                                                                                gtaCCCCGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCaaa                                 >  1:262542/1‑251 (MQ=255)                                                                                                                  accccGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCAAAcc                               <  1:695765/248‑1 (MQ=255)                                                                                                                  accccGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCAAAc                                >  1:889059/4‑250 (MQ=255)                                                                                                                    cccGAAAAATGCAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGAttcggg                                                          >  1:683668/2‑218 (MQ=255)                                                                                                                            atgcAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGAAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCAAACCTCAATTaagg                     <  1:842950/248‑3 (MQ=255)                                                                                                                            atgcAAAATCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGCCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCAAACCTCAATTaagg                     >  1:862738/4‑249 (MQ=255)                                                                                                                                 aaaTCGTGCTGCGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCAAACCTCAATTaaggagttt                >  1:599979/1‑244 (MQ=255)                                                                                                                                   atcgtgctgcGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCt                                             <  1:226205/216‑1 (MQ=255)                                                                                                                                   atcgtgctgcGCAATGACAATCGCAAAAGTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACGCTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCAAACCTCAATTAAGGAGTttat              <  1:721069/247‑1 (MQ=255)                                                                                                                                     cgtgctgcGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCAAACCTCAATTAAGGAGTttatta            <  1:359268/249‑1 (MQ=255)                                                                                                                                          tgcGCAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCAAACCTCAATTAAGGAGTTTATTAAGCaa       <  1:60118/251‑1 (MQ=255)                                                                                                                                           gcgcAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGAttcgggttgtgta                                                   <  1:334947/206‑12 (MQ=255)                                                                                                                                           gcgcAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGAttcgggt                                                         <  1:272132/200‑6 (MQ=255)                                                                                                                                           gcgcAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCAAACCTCAATTAAGGAGTTTATTAAGCaaa      >  1:235553/1‑251 (MQ=255)                                                                                                                                             gcAATGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCAAACCTCAATTAAGGAGTTTATTAAGCAAAt     >  1:29773/1‑250 (MQ=255)                                                                                                                                               aaTGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCAAACCTCAATTAAGGAGTTTATTAAGCAAAtcgt  >  1:493187/1‑248 (MQ=255)                                                                                                                                               aaTGACAATCTCAAAATTAAGGGGGTAACGGCAGAGCAGGAAGAAAATTTACGTGAGATCCACGCGATGAACCCCGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCCGAGCTGGATTTAGACAGCTACAAAAAAGCGGCTGATACACTTTTCGACGAGGGATTCGGGTTGTGTATCCGCTACAATCGGCAAACCTCAATTAAGGAGTTTATTAAGCAAAtcgt  <  1:666102/251‑4 (MQ=255)                                                                                                                                                                         |                                                                                                                                                                                                                                 CATTGTCACTACCGTGTTTTCGGGCCTTATCAGCTGCTATAACGCATACCCTAAAAAGCACAGCTACCGGGTGCGCCGTGCCCACAAAGGCTGGCACAATGGCGTGGTATGGTACGCCGAAAAAGCCAAAATCCTGCTGCGCAATGACAATCTTAAAATTAAAGGTTTGACAGCCGAACAAGAACAAAATGTACGCCAAATCCACGCCATGAACCCGGCACATATCCTGGTTGAATGCGCCACTAATAAAAGCTGGGGCGGCAAAAAAGACTTATCAGAGCTGGATTTAGACAGCTATAAAAAAGCGGCAGATACGCTTTTCGATGAGGGATTTGGCCTCTGTATCCGCTACAACCGGCAAACCTCCATTAAAGATTTTATTAAGCAAATTGT  >  1/855167‑855559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑