| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 847,989 | C→T | G286G (GGG→GGA) | unknown ← | Ferric anguibactin transport system permease protein fatD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 847,989 | 0 | C | T | 92.3% | 194.9 / ‑4.9 | 78 | G286G (GGG→GGA) | unknown | Ferric anguibactin transport system permease protein fatD |
| Reads supporting (aligned to +/- strand): ref base C (0/6); new base T (53/19); total (53/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.90e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTGTAAGCCATGATAAGCAATAATAAAAGTTTTTTTCCACGGAACGGTAACACGAAATCCCAGTTGCCGTTGGCGTTGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGCCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGATATTGCGCCCCAAGCCGG > 1/847743‑848230 | gtgtAAGCCATGATAAGCAATAATAAAAGTTTTTTTCCACGGAACGGTAACACGAAATCCCAGTTGCCGTTGGCGTTGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAAcccgtcccg > 1:584647/1‑251 (MQ=255) aTGATAAGCAATAATAAAAGTTTTTTTCCACGGAACGGTAACACGAAATCCCAGTTGCCGTTGGCGTTGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCg > 1:145035/1‑250 (MQ=255) taataaAAGTTTTTTTCCACGGAACGGTAACACGAAATCCCAGTTGCCGTTGGCGTTGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTACCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAacac > 1:423380/1‑250 (MQ=255) gAACGGTAACACGAAATCCCAGTTGCCGTTGGCGTTGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAAtt > 1:266560/1‑235 (MQ=255) ggTAACACGAAATCCCAGTTGCCGTTGGCGTTGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACgg > 1:168801/1‑251 (MQ=255) gTAACACGAAATCCCAGTTGCCGTTGGCGTTGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACgg < 1:639931/250‑1 (MQ=255) aaaTCCCAGTTGCCGTTGGCGTTGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑t > 1:807585/1‑251 (MQ=255) gCGTTGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCg > 1:167647/1‑250 (MQ=255) gCGTTGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCg > 1:723344/1‑250 (MQ=255) gTTGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGTGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCg > 1:253173/1‑251 (MQ=255) ttGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCgg > 1:526669/1‑251 (MQ=255) tAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGaaa < 1:399229/251‑1 (MQ=255) aaaaTACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑aaaa > 1:433563/1‑250 (MQ=255) cGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATATTAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTAc < 1:814063/251‑1 (MQ=255) aaCGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACaa > 1:755784/1‑251 (MQ=255) cGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAAcc < 1:825997/251‑1 (MQ=255) gTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAAcc > 1:443860/1‑250 (MQ=255) ggCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAAc > 1:169367/1‑239 (MQ=255) gCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGATAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATa < 1:428194/248‑1 (MQ=255) ggCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑gcgc > 1:36466/1‑155 (MQ=255) ggCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑c > 1:30606/1‑250 (MQ=255) cTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGa > 1:609654/1‑165 (MQ=255) attattTCCCAT‑GGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCaa < 1:134012/116‑1 (MQ=255) tattTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTaccac < 1:412233/251‑1 (MQ=255) attTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGcc > 1:145498/1‑219 (MQ=255) attTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTaccacc < 1:307171/251‑1 (MQ=255) tttCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTAccacca > 1:885130/1‑251 (MQ=255) tCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACcaca > 1:839614/1‑251 (MQ=255) tCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACcaca > 1:890661/1‑251 (MQ=255) tCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACcaca > 1:629614/1‑251 (MQ=255) tGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGt > 1:716349/1‑196 (MQ=255) gggCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAAccgc > 1:307192/1‑250 (MQ=255) ggCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAAccgccg > 1:98591/1‑251 (MQ=255) ccccTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTaccac < 1:787180/234‑1 (MQ=255) ccccTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAatca > 1:808551/1‑251 (MQ=255) cccTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAatcat > 1:270664/1‑251 (MQ=255) cccTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAatcat > 1:467024/1‑251 (MQ=255) ccTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAAc < 1:685413/196‑1 (MQ=255) tAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAgg > 1:154275/1‑208 (MQ=255) aaaTAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGcca > 1:293215/1‑251 (MQ=255) ataataAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTaccac < 1:44206/226‑1 (MQ=255) ataataAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGccac > 1:390930/1‑250 (MQ=255) ataataAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGccac > 1:896020/1‑250 (MQ=255) ataataAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGccac > 1:275460/1‑250 (MQ=255) aataaataGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACgg < 1:84749/130‑1 (MQ=255) gagGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAgg > 1:641660/1‑195 (MQ=255) aaaTCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAAcc < 1:285578/176‑1 (MQ=255) cGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGa > 1:523987/1‑251 (MQ=255) tGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑Aaataa < 1:641733/144‑1 (MQ=255) ccGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGAtaatt > 1:524087/1‑251 (MQ=255) ccGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTaccacc > 1:46050/1‑185 (MQ=255) ccGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGc > 1:189045/1‑249 (MQ=255) ccGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGc > 1:339608/1‑249 (MQ=255) aaaaccgcccctacATAAGGCGCATTAATACCCCCCCCCGCAATGTCCCACATAACCCCC‑AAATTT‑GCCCCGAGCAACCCCAGGAAAGGAAAA‑TTTT‑GCCGCGGGCGATCGCGGGAAG‑GGGGGG‑AAATAA‑TGTT‑CGGTACACCCAGCCC‑AAAAAAAGAATTTGG‑CCCGACGGTTCCCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAAcgc < 1:818248/238‑1 (MQ=255) ccttcagagggCGCATAGATACCCCCCCCCGAAATGCCGCAAATAAACACC‑AATTTT‑GCGCGGAGC‑ACCCCCGGGAAAGAAAATTTTT‑GTCGCAGGCGATCG‑CGGAAA‑GGGGGGAAAATAA‑TGTT‑GGGTACACCCA‑CCCAAAAAAAAGGATTT‑GCCCCGCGGGTTCCCCCCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGat < 1:552131/242‑1 (MQ=255) tgtgaaaaagagacaggaaaccccgccccgaAATGTCGCACATAAAC‑CC‑AAATTTGGCGCCGAACACCACCAGGGAAGGAAAT‑TTTT‑GCCGCGGGCGACCG‑CGGAAAGGGCGGA‑AAATAA‑TGTT‑CGGAACACCCACCCAAAAAAAAGGATTTT‑G‑CCCGACGTTCCCCCCCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGata < 1:698384/230‑1 (MQ=255) cttaaTAAGGCGCATTAATACCCCGCCCCGAAATGTCGCACA‑TAACCCCAAAATTG‑GCGCCGAGCACCACCA‑GGAAGGGAAA‑TTTTGGCCGCGGGCGACCG‑CGGAAAGGGCGGA‑AAATAT‑TGTC‑CGGACCAACCACCCCAAAAAAAGGAATTG‑C‑CCCGAGGGTCCCCCCCAAAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGata < 1:23668/247‑1 (MQ=255) ctcaaTAAGGCCTATTCATACCCCCCCCCACAATGTCAAACATCACCACA‑AAATTT‑GCGCCGAGCACCACCAGGGAAGCCATA‑TTTT‑GCCGCGGGCGATCG‑CAGAAA‑GGGGGG‑AAAAAA‑TTTTCCGCTACACCCGCCCCAAAAAAAGGATTTC‑C‑CCCGACGTTTCCCCCCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGata < 1:550159/247‑1 (MQ=255) cTTCATAGGGCGATTTGAAACCCCCCCCCGCAATGCCGCACATAACCACC‑AATTTG‑GCGCCGAACAACCCCAGGGAAGGAAAA‑TTTT‑GCCGCGGGCGATCGCCGAAAG‑GGCGGA‑AAATAT‑TGTT‑CGGTACACCCAGCCCAAAAAAAGGATTTT‑G‑CCCGACGTTTCCCCCCACACCCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGata < 1:694204/251‑1 (MQ=255) cTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAg < 1:222363/147‑1 (MQ=255) cTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAatc > 1:108151/1‑185 (MQ=255) cTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACTACGATTAAgg > 1:433757/1‑204 (MQ=255) cTTCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGata > 1:235235/1‑251 (MQ=255) cTTCAAAAGGCGCATTGATACCCCCCCCCGCAATGTCGCACATTAACACC‑AATTTT‑GCGCCGAGCAACACCAGGGAAGGAAAT‑TTTT‑GCCGCAGGCGACCG‑CGGAAA‑GGGGGGAAAATAA‑TTTT‑CGGTACACCCACCCCAAAAAAAGAATTTT‑C‑CCCGACGTTTACCCCCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGata < 1:762703/251‑1 (MQ=255) taaaaaggacaaatagaaaccccgccccgcAATGTCGCAAATAAAC‑CC‑AAATTTGGCGCCGAGCAACCCCAGGGAGGGAAAT‑TTTT‑GTCGCGGGCGAGCGCGGGAAG‑GGGGGA‑AAATAA‑TGTT‑CGCAACACCCACCCCAAAAAAAGAAATTG‑G‑CCCGACGTTTCCCCCCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGatat < 1:112658/231‑1 (MQ=255) tCATAAGGCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGatat > 1:863598/1‑250 (MQ=255) ggCGCATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGATATTGCGcc > 1:173617/1‑250 (MQ=255) gcgcATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGATATTGCGccc > 1:674371/1‑250 (MQ=255) cATTGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGATATTGCGCCCCAAg > 1:349890/1‑251 (MQ=255) ttGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAacac < 1:353803/56‑1 (MQ=255) ttGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTaccacc < 1:393225/156‑1 (MQ=255) ttGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAAccg < 1:634706/163‑1 (MQ=255) ttGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAAcc < 1:525128/162‑1 (MQ=255) ttGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGc > 1:210850/1‑191 (MQ=255) ttGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGc > 1:389640/1‑191 (MQ=255) ttGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGata > 1:618313/1‑237 (MQ=255) ttGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGATATTGCGCCCCAAGc > 1:826407/1‑250 (MQ=255) ttGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGATATTGCGCCCCAAGc > 1:852271/1‑250 (MQ=255) ttGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGATATTGCGCCCCAAGc > 1:454294/1‑250 (MQ=255) ttGATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGATATTGCGCCCCAAGc > 1:101982/1‑250 (MQ=255) taaacaccccgccccgaAATGCCGCAAATAAACCCA‑AAATTG‑GCGCCGAAAAACACCAGGAAAGGAAAT‑TTTT‑GCCGCAGGCGACCG‑CGGAAA‑GGGGGG‑AAAAAATTGTT‑GGAAACAACAAGCCAAAAAAAAGGAATTG‑C‑CCCGCGGGTTACCACAACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGAtaattaa < 1:272543/210‑1 (MQ=255) gATAACCCGTCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGATATTGCGCCCCAAGCCgg > 1:118834/1‑251 (MQ=255) | GTGTAAGCCATGATAAGCAATAATAAAAGTTTTTTTCCACGGAACGGTAACACGAAATCCCAGTTGCCGTTGGCGTTGTAACTCATGAAAAATACACAGGCGAACGTGAGCAACAGGCAAAGGAAGGGCATTCTGCGATTATTTCCCATGGGCGTTCCCCTTAAATAATAAATAGAGGAAAATCAAGGTGCCGACAATGCCGAACACCGTTGAAATCGGCACTTCATAAGGCGCATTGATAACCCGCCCCGCAATGTCGCACATTAACACC‑AAATTT‑GCGCCGAGCAACACCACGGAAGGCAAA‑TTTT‑GTCGCAGGCGATCGCCGGAAA‑GGCGGG‑AAATAA‑TGTT‑CGGTACAACCAGCCCGATAAAAGGAATTT‑G‑CCCGACGGTTACCACCACAACCGCCGTAATCATCGCCACCACGATTAAGGCAAACCACGTCATTTGACGATAATTAATGCCTAACGCGGTGCTGATATTGCGCCCCAAGCCGG > 1/847743‑848230 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |