| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 837,258 | A→G | P498P (CCA→CCG) | unknown → | Electron transport complex protein RnfC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 837,258 | 0 | A | G | 100.0% | 217.2 / NA | 76 | P498P (CCA→CCG) | unknown | Electron transport complex protein RnfC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (38/38); total (38/38) | |||||||||||
GTATTGAATGCGGCGTGTGCGCTTATGTTTGCCCAAGTCACATTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCAGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACAGAAAAAACGCTAGAAAAAACGCTAGAAAAAACCACCGCACTTGAGGATAAAAAAT > 1/837014‑837502 | gTATTGAATGCGGCGTGTGCGCTTATGTTTGCCCAAGTCACATTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTgg > 1:527407/1‑249 (MQ=255)gTATTGAATGCGGCGTGTGCGCTTATGTTTGCCCAAGTCACATTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTgg > 1:513930/1‑249 (MQ=255)gTATTGAATGCGGCGTGTGCGCTTATGTTTGCCCAAGTCACATTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTgg > 1:169436/1‑249 (MQ=255) aTTGAATGCGGCGTGTGCGCTTATGTTTGCCCAAGTCACATTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGGACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTg > 1:449708/1‑250 (MQ=255) gAATGCGGCGTGTGCGCTTATGTTTGCCCAAGTCACATTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTgccg > 1:657390/1‑250 (MQ=255) cgTGTGCGCTTATGTTTGCCCAAGTCACATTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAgcg < 1:537448/250‑1 (MQ=255) cgTGTGCGCTTATGTTTGCCCAAGTCACATTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAgcg < 1:113827/250‑1 (MQ=255) aTGTTTGCCCAAGTCACATTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAgcg > 1:75778/1‑239 (MQ=255) tGTTTGCCCAAGTCACATTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGa > 1:574241/1‑251 (MQ=255) gTCACATTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCg > 1:206088/1‑239 (MQ=255) caTTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCg > 1:795998/1‑235 (MQ=255) ccGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGa > 1:241524/1‑251 (MQ=255) ttAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTGGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGc < 1:375071/251‑1 (MQ=255) tCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCGACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACgc < 1:180513/251‑1 (MQ=255) tCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACgc < 1:886129/251‑1 (MQ=255) tCAATATTTCCGCCGGGAAAAACCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACgc < 1:563091/251‑1 (MQ=255) aaTATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACgcag < 1:149812/251‑1 (MQ=255) atTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACgcaggca < 1:603106/251‑1 (MQ=255) cTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCAttg < 1:62838/249‑1 (MQ=255) aaTCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGaaa < 1:569958/238‑1 (MQ=255) acacAAAGCCAAATTGGTGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTACCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATcc < 1:856625/251‑1 (MQ=255) acacAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATcc < 1:176357/251‑1 (MQ=255) aaaGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATcctgcc < 1:644137/251‑1 (MQ=255) aaGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATcctgcct < 1:832959/251‑1 (MQ=255) gCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATcc < 1:120062/244‑1 (MQ=255) cAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGGAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGaca < 1:573759/251‑1 (MQ=255) cAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGaca < 1:539404/251‑1 (MQ=255) tGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGc < 1:282811/251‑1 (MQ=255) aagaagCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGAcatc < 1:103716/251‑1 (MQ=255) aagCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGcagaac > 1:177004/1‑195 (MQ=255) cTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAgg > 1:640676/1‑217 (MQ=255) cTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGc < 1:143084/250‑1 (MQ=255) tAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGcac < 1:875700/251‑1 (MQ=255) aaaaTACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTATGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATc < 1:560568/222‑1 (MQ=255) aaaaTACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATcc > 1:280500/1‑223 (MQ=255) aaaaTACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGacaac > 1:57586/1‑234 (MQ=255) cGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCaa > 1:671779/1‑251 (MQ=255) ttGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGcc < 1:496439/251‑1 (MQ=255) ttGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGcc < 1:714848/251‑1 (MQ=255) gAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGcac < 1:699068/238‑1 (MQ=255) aacGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCcgtcgt < 1:111551/251‑1 (MQ=255) aacGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCcgtcgt < 1:239596/251‑1 (MQ=255) cGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGttt > 1:461345/1‑251 (MQ=255) gCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCa < 1:133776/199‑1 (MQ=255) aaGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGcc < 1:581129/251‑1 (MQ=255) aaGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGcc < 1:230366/251‑1 (MQ=255) cGTTTGGAACGGGAAGCACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCa > 1:892053/1‑251 (MQ=255) gTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAg > 1:643488/1‑251 (MQ=255) tttGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAg < 1:63560/250‑1 (MQ=255) ggAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATcctgcc > 1:864934/1‑189 (MQ=255) gaaCAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGcac > 1:884129/1‑208 (MQ=255) aaCAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGcac < 1:314529/249‑1 (MQ=255) ggAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGcc > 1:776497/1‑214 (MQ=255) cGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATc < 1:772369/171‑1 (MQ=255) gATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGcagaa > 1:216176/1‑251 (MQ=255) cTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGcagaaaacag > 1:773835/1‑251 (MQ=255) cTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGcagaaaacag > 1:218179/1‑251 (MQ=255) caACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGc > 1:9801/1‑221 (MQ=255) gtactgcAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACagaaaaaacg > 1:285690/4‑251 (MQ=255) gTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACagaaaaaacg > 1:181692/1‑251 (MQ=255) tgctgcAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGaca < 1:161009/161‑1 (MQ=255) gtcgtGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACAgacaaaacgctagaaaaaacgcta > 1:192786/1‑251 (MQ=255) gtGAAGAATTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGaaa > 1:462657/1‑107 (MQ=255) aaTTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACAGAAAAAACGCTAGAAAAAACGCTAGAAAAAacc < 1:154565/251‑1 (MQ=255) aaTTGGCGCAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACAGAAAAAACGCTAGAAAAAACGCTAGAAAAAacc < 1:299510/251‑1 (MQ=255) gcgcAACAAAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACAGAAAAAACGCTAGAAAAAACGCTAGAAAAAACCACCg > 1:866468/1‑250 (MQ=255) acaaAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAAcc < 1:220101/94‑1 (MQ=255) acaaAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCg > 1:511148/1‑178 (MQ=255) acaaAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGc > 1:283895/1‑200 (MQ=255) acaaAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACAGAAAAAACGCTAGAAAAAACGCTAGAAAAAACCACCGCACTTg > 1:321425/1‑251 (MQ=255) acaaAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACAGAAAAAACGCTAGAAAAAACGCTAGAAAAAACCACCGCACTTg < 1:706907/251‑1 (MQ=255) acaaAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACAGAAAAAACGCTAGAAAAAACGCTAGAAAAAACCACCGCACTTg > 1:255334/1‑251 (MQ=255) acaaAAAGGCGTGGATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCACCGTCGCAGAAAACAGAAAaaacgctagaaaaaacgctagaaa > 1:402389/1‑236 (MQ=255) gATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACAGAAAAAACGCTAGAAAAAACGCTAGAAAAAaccac > 1:516836/1‑230 (MQ=255) gATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACAGAAAAAACGCTAGAAAAAACGCTAGAAAAAACCACCGCACTTGAGGATAAAAAAt > 1:624844/1‑250 (MQ=255) gATCCGGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACAGAAAAAACGCTAGAAAAAACGCTAGAAAAAACCACCGCACTTGAGGATAAAAAAt > 1:462614/1‑250 (MQ=255) | GTATTGAATGCGGCGTGTGCGCTTATGTTTGCCCAAGTCACATTCCGTTAATTCAATATTTCCGCCGGGAAAAAGCTAAAATCTGGGAAATCAAACACAAAGCCAAATTGGCGGAAGAAGCTAAAATACGTTTTGAACAACGCCAAGCCCGTTTGGAACGGGAAGAACAGGAACGCAAAGATCGCTCACAACGTGCTGCAGCCGCCCGTCGTGAAGAATTGGCGCAACAAAAAGGCGTGGATCCAGTGGCTGCCGCCTTAGCGCGCTTAAAAGCGAAAAAAGCCGAAACGACGGAAGCTACGCAGGCAGAACAGAAAACCATTGTTGACGAAAAAGGTCATATCCTGCCTGACAACAGCGACATCATGGCACAACGCAAAGCCCGTCGTTTAGCCCGTCAGGCGGAAGCGGCACACTCGCCGTCGCAGAAAACAGAAAAAACGCTAGAAAAAACGCTAGAAAAAACCACCGCACTTGAGGATAAAAAAT > 1/837014‑837502 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |