| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 836,327 | G→A | R188H (CGT→CAT) | unknown → | Electron transport complex protein RnfC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 836,327 | 0 | G | A | 100.0% | 237.8 / NA | 87 | R188H (CGT→CAT) | unknown | Electron transport complex protein RnfC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (42/45); total (42/45) | |||||||||||
AAACCTGTGTGCATATTAAAGCGGATGGATTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCGTGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAGGTACCTAGCGGTCAACGCTCCTC > 1/836081‑836567 | aaaCCTGTGTGCATATTAAAGCGGATGGATTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAGCCTTACATTACCTGCGACGATCGCTTAATGCATGAt < 1:394746/251‑1 (MQ=255)aaaCCTGTGTGCATATTAAAGCGGATGGATTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGAt < 1:632551/251‑1 (MQ=255) ccTGTGTGCATATTAAAGCGGATGGATTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGAt < 1:419175/248‑1 (MQ=255) tgtgtgCATATTAAAGCGGATGGATTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGc < 1:325252/251‑1 (MQ=255) tgtgtgCATATTAAAGCGGATGGATTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGc < 1:526515/251‑1 (MQ=255) tgtgCATATTAAAGCGGATGGATTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCtg < 1:871442/251‑1 (MQ=255) tgtgCATATTAAAGCGGATGGATTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCtg < 1:375251/251‑1 (MQ=255) gtgCATATTAAAGCGGATGGATTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCtga > 1:579563/1‑251 (MQ=255) atatTAAAGCGGATGGATTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGAt > 1:86783/1‑239 (MQ=255) tatTAAAGCGGATGGATTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGaaa > 1:752118/1‑251 (MQ=255) gatTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCtg > 1:99726/1‑231 (MQ=255) gatTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGgcgtg > 1:844846/1‑251 (MQ=255) gatTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGgcgtg > 1:307365/1‑251 (MQ=255) gatTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGgcgtg > 1:273631/1‑251 (MQ=255) gATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGc < 1:743726/224‑1 (MQ=255) gATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTAt > 1:844627/1‑251 (MQ=255) aGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACAtt > 1:86692/1‑251 (MQ=255) aGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACAtt > 1:279082/1‑251 (MQ=255) aaCCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGGGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTAc < 1:452883/251‑1 (MQ=255) aCCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACg < 1:21300/251‑1 (MQ=255) ccccGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACg > 1:525166/1‑250 (MQ=255) ccGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGcc > 1:679632/1‑250 (MQ=255) ggaTTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTTCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTAAATTCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTAt > 1:195596/1‑222 (MQ=255) ggaTTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGAt < 1:863667/190‑1 (MQ=255) gaTTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAg < 1:889487/250‑1 (MQ=255) tCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAgtggtg > 1:225484/1‑251 (MQ=255) ccGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAg < 1:697622/250‑1 (MQ=255) cGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGat < 1:335029/251‑1 (MQ=255) ttAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAAcc < 1:205077/251‑1 (MQ=255) cGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAg < 1:572114/251‑1 (MQ=255) ggCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAg > 1:54660/1‑221 (MQ=255) cGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGaa < 1:666866/251‑1 (MQ=255) cGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGaa < 1:584993/251‑1 (MQ=255) cGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGA‑AAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAAc < 1:127787/251‑1 (MQ=255) ttGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTGCATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGat < 1:242458/215‑1 (MQ=255) ggTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCtg > 1:550910/1‑136 (MQ=255) tCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTacac < 1:617127/250‑1 (MQ=255) tCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTacac < 1:647779/250‑1 (MQ=255) tCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACg < 1:196044/251‑1 (MQ=255) cgGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGc > 1:101552/1‑167 (MQ=255) ggTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGc > 1:238163/1‑120 (MQ=255) gTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGAt > 1:105611/1‑114 (MQ=255) gTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTAc > 1:209057/1‑163 (MQ=255) gTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGatat > 1:797456/1‑251 (MQ=255) gTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGatat > 1:300717/1‑251 (MQ=255) aTTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGc > 1:551189/1‑163 (MQ=255) aTTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTaca > 1:107448/1‑234 (MQ=255) cGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATc < 1:787027/251‑1 (MQ=255) cGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATc < 1:288739/251‑1 (MQ=255) aaaaaTTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTc < 1:564815/251‑1 (MQ=255) cgccgAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATAcc < 1:508990/251‑1 (MQ=255) aaaCAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCgg > 1:126707/1‑251 (MQ=255) aaaCAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCgg < 1:579377/251‑1 (MQ=255) ggTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCtg < 1:307568/80‑1 (MQ=255) ggTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTc > 1:95604/1‑227 (MQ=255) aTTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAAc < 1:671231/251‑1 (MQ=255) ttattaACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAAtt < 1:18052/251‑1 (MQ=255) ttattaACCGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTAta > 1:500590/1‑91 (MQ=255) cGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGc < 1:598731/251‑1 (MQ=255) cGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGc < 1:309616/251‑1 (MQ=255) cGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGc < 1:692226/251‑1 (MQ=255) gcgcGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGaa < 1:845002/109‑1 (MQ=255) gAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCgg > 1:187780/1‑251 (MQ=255) aTGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGc < 1:125787/48‑1 (MQ=255) aTGTGAACCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCa > 1:415882/1‑251 (MQ=255) aCCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAgg > 1:261721/1‑251 (MQ=255) aCCTTACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAgg > 1:757593/1‑251 (MQ=255) ttACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAg < 1:855900/247‑1 (MQ=255) tACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGataat > 1:63906/1‑117 (MQ=255) tACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGat < 1:434208/114‑1 (MQ=255) tACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACg < 1:253116/166‑1 (MQ=255) tACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAGGTAc > 1:645713/1‑250 (MQ=255) tACATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAGGTAc > 1:856290/1‑250 (MQ=255) aCATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAGGTACCt < 1:267555/251‑1 (MQ=255) aCATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAGGTACCt < 1:552849/251‑1 (MQ=255) cATTACCTGCGACGATCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAGGTACCTa > 1:62062/1‑251 (MQ=255) cgacgaTCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAGGTACCTAGCGGTCAAc < 1:461340/251‑1 (MQ=255) tCGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAGGTACCTAGCGGTCAACGctc > 1:100535/1‑249 (MQ=255) cGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATAccc > 1:817736/1‑182 (MQ=255) cGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAGGTACCTAGCGGTCAACGctcctc < 1:467816/251‑1 (MQ=255) cGCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAGGTACCTAGCGGTCAACGctcct > 1:106684/1‑250 (MQ=255) gCTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGCGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAGGCACCTAGCGGTCAACGctcctc > 1:719058/1‑250 (MQ=255) cTTAATGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTc < 1:428521/167‑1 (MQ=255) aTGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGc < 1:240704/60‑1 (MQ=255) aTGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGc > 1:216565/1‑208 (MQ=255) aTGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAgg > 1:583031/1‑223 (MQ=255) aTGCATGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAgg > 1:492857/1‑223 (MQ=255) | AAACCTGTGTGCATATTAAAGCGGATGGATTAGATCAATGGCGCGAGCAAACCCCGTTGGAGGATTTCCTTAGCCAAACGCCGGAACAGTTAATCGAAAAAATTTATCAGGCGGGCATTGCCGGTCTGGGTGGCGCGGTATTCCCGACCGCGGCAAAAATTCATTCCGCCGAGAAACAGGTGAAATTACTGATTATTAACGGCGCGGAATGTGAACCTTACATTACCTGCGACGATCGCTTAATGCGTGATTATGCTGATGAAATTATCGAAGGCGTGCGTATTTTGCGCTACATTTTACGCCCTGAGAAAGTGGTGATCGCCGTTGAAGATAATAAACCAAAAGCGGTGAAATCCTTGGAACGCGCCTTACACGGCGCCAACGATATTGAAATCCGAGTGATTCCGACCAAATACCCTTCCGGCGCGGCAAAACAGTTAATTCAAGTGCTGACCGGCATGGAGGTACCTAGCGGTCAACGCTCCTC > 1/836081‑836567 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |