| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 805,239 | A→G | V53V (GTA→GTG) | unknown → | Additional component NikL of nickel ECF transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 805,239 | 0 | A | G | 100.0% | 192.4 / NA | 68 | V53V (GTA→GTG) | unknown | Additional component NikL of nickel ECF transporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (34/34); total (34/34) | |||||||||||
AATTTTCGGAAAACGTGAAAGGCAACCCCGATTACGATCGCCGTTCGGTGGAATATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTAGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCATCGGGCGACGGTCGTGGCGGACAGAATTACGGCGAAT‑GCCGGCGCAACAACT‑CGGGCGGGCGATG‑AAAGTCTGCTGTTGTTACGCGGTGATATTGCGCAGTTGCGCGATAAAATT > 1/804995‑805485 | aaTTTTCGGAAAACGTGAAAGGCAACCCCGATTACGATCGCCGTTCGGTGGAATATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAgg < 1:226215/249‑1 (MQ=255)aaTTTTCGGAAAACGTGAAAGGCAACCCCGATTACGATCGCCGTTCGGTGGAATATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGgtg < 1:363816/251‑1 (MQ=255) gAAAACGTGAAAGGCAACCCCGATTACGATCGCCGTTCGGTGGAATATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGcc < 1:795777/250‑1 (MQ=255) cGTGAAAGGCAACCCCGATTACGATCGCCGTTCGGTGGAATATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAgggg > 1:131998/1‑251 (MQ=255) cGTGAAAGGCAACCCCGATTACGATCGCCGTTCGGTGGAATATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAgggg > 1:771005/1‑251 (MQ=255) gCAACCCCGATTACGATCGCCGTTCGGTGGAATATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATc < 1:800893/249‑1 (MQ=255) cGATCGCCGTTCGGTGGAATATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATc > 1:644993/1‑236 (MQ=255) cGTTCGGTGGAATATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAAc < 1:45630/251‑1 (MQ=255) tGGAATATATGCTGTCCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAAt < 1:191185/251‑1 (MQ=255) tGGAATATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAAt < 1:406149/251‑1 (MQ=255) gAATATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATgg > 1:611408/1‑251 (MQ=255) aaTATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATgg > 1:538386/1‑250 (MQ=255) atatatGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCa < 1:94788/207‑1 (MQ=255) cTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTATGTGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTa < 1:768259/250‑1 (MQ=255) ccTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCa > 1:719168/1‑250 (MQ=255) gAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTctacctccgctaaa > 1:200084/1‑238 (MQ=255) aaaaaacCGCCGTATTTTTTGACCGCCCTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAACCCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAatat < 1:551232/251‑1 (MQ=255) aaaaaaCGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTTACCTGCCGTTTAAAGCGGaacccaat > 1:503918/1‑241 (MQ=255) gTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTTTTTTCACCTTCCGTTAAAAACGGATCCGAATATGGCGGTGAAAg > 1:40495/1‑251 (MQ=255) gTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCCGCCGTTAAAAGCGGATCCGAATATGGGGTTGAAAg > 1:4054/1‑251 (MQ=255) aTTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTTTTTTCCACTGCCGGTAAAAACGGACCCCGATATGGCggtggaaagg > 1:420183/1‑242 (MQ=255) tGACCGCCCTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAgtggtggtg < 1:58587/251‑1 (MQ=255) cccGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCTTTTA‑‑TGTATTTGCCCAGTATGACGGGCAACCCGTG‑ACGGGAAAATCCTATTATCCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGa < 1:365493/250‑1 (MQ=255) tttGGGCTTGTGTTTGGCCCCTCGCGCTGGGCCGCCCGCCCTTTA‑‑TGTTTTTGCCCAGTATGACGGGCAAACCGTG‑CCGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGG‑AAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGa < 1:322008/251‑1 (MQ=255) tATGTGTTGCACCTCACGCTTGGCCGCACGCCTTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGAAAAATCCTATTATCCCGACAGGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGACAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCAt < 1:692615/251‑1 (MQ=255) gtgtTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTc > 1:521166/1‑183 (MQ=255) ggccagccTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGCCGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCGGTTGCGGACGGGAAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCATCggg < 1:788095/244‑1 (MQ=255) cgctgggccgcacgcCCTTTA‑‑TGTTTTTGCCCAGTTAGCCGGGCAACCCGTG‑ACGAAAAATTCCTATTATTCCGACAGGCCCCCCGCCGTCGAACCCTATGTGGAGGTGTTCCGCCAAGGGGAAAACCAGCCGTTGCTGACGGGCAAAACCGACAAGGGGGGTTTTTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGaaa < 1:20878/200‑1 (MQ=255) cGCTTGGCCGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAACCCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAat < 1:584592/196‑1 (MQ=255) cGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGGTGAAAGGGGGGGGGGGAGGTGAGGAAGGGCATCGGGCGACGGGCGTgg > 1:733651/1‑251 (MQ=255) cGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTAATTTCACCTGTCGTTAAAAACGGATTCGAATATGGCGGTGGAAGTGGGGGGGGAAGGCGAGGGAAGGCATctgtctcttattaaca > 1:842345/1‑236 (MQ=255) gcCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTTACCTGCCGCTAAAAACGGATCCGAATATGGCGGTGAAAGGGGGGGGGGGAGGGGGGGAAGGGGATCGGGCGACgggcggggggggcagaaataa > 1:301318/1‑232 (MQ=255) cccTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGCCCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAgg < 1:721445/208‑1 (MQ=255) cccTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTTACCTGCCGTTAAAAACGGGTCCGAATATGGCGTTGGAAGGGGGGGGGGGAGGGGGGGAAGGGGATCGGGGGGCGGTCGGGGCGGGCCGAATTAc > 1:237758/1‑250 (MQ=255) cccTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGGTGAAAGTGGGGGGGGAAGGTGAGGAAGGGCATCGGGCGACGGTCGTGGCGGGCAGaaataag > 1:477848/1‑246 (MQ=255) cccTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAACGGATCCGAATATGGCGTTGAAAGTGGGGGGGGGAGGGGAGGAAGGGCATCGGGCGACGGTCGGGGGGGGCAGAAATACg > 1:561334/1‑251 (MQ=255) cccTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGGTAATTTTACCCGCCGTTAAAAACGGATCCGAAAATGGCGTTGAAAGTGGGGGGGGAAGGGGAGGAAAGGCAACGGGGGACgggcggggggggcagaaataag > 1:288463/1‑231 (MQ=255) ccTTTA‑‑AGTATTTGCCAAATATG‑CGGGAAAAGCGGGAACGAGAAAACCCTATTTTTCCAAATTGCCCCCCGCCGCCAAAACCTATGTGGGGGTGTTACGCCAAGGGGAAAATCAGCGTTTACTGACGGCCAAAACCCACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCATCGGGCGACGGTCGTGGCGGACAGAATTACgg < 1:554438/251‑1 (MQ=255) cTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGc < 1:96450/170‑1 (MQ=255) gCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTc < 1:382294/142‑1 (MQ=255) gTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGCCCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAg < 1:633974/197‑1 (MQ=255) gTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTTACCTGCCGTTAAAAACGGGTCCGAATAAGGCGTTGAAAgtggtgg > 1:698087/1‑182 (MQ=255) gTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGAGGGGGGGGGAGGGGAGGAAGGGGATCGGGCGACGGTCGGGGGGGGCAGAAATAAGGGGAAA‑GCCGGCGccacaa > 1:703467/1‑251 (MQ=255) tGACGGGCAACCCGTG‑ACGGGAAAATCCTATTATTCCGAAATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCATCGGGCGACGGTCGTGGCGGACAGAATTACGGCGAAT‑GCCGGCGCAACAACT‑c < 1:60277/251‑1 (MQ=255) gggCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCAcc < 1:405140/133‑1 (MQ=255) gCAAACCGTG‑ACGGGAAAATCCTATTATCCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCATCGGGCGACGGTCGTGGCGGACAGAATTACGGCGAAT‑GCCGGCGCAACAACT‑cgggcg < 1:664334/250‑1 (MQ=255) aaCCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTTACCCGCCGTTAAAAACGGATCCGAATATGGCGGTGAAAGTGGTGGGGGGAGGGGAGGAAGGGCATCGGGCGACGGGCGTGGCGGGCAGAAATAAGGGGGAA‑GGCGGCGCAAAAAAT‑CGggcgggcg > 1:156324/1‑251 (MQ=255) tCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAAt < 1:833898/66‑1 (MQ=255) cTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCCGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGGGGGGGGAGGGGAGGAAGGGCATCGGGCGACGGGCGTGGCGGACAGAATTACGGCGAAT‑GCCGGCGCCACAAAT‑CGGGGGGGGGGTG‑AAAGTCTGCtgttgt > 1:155811/1‑251 (MQ=255) attCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTTACCTGCCGTTAAAAGCGGATCCGAATATGGc > 1:185048/1‑133 (MQ=255) attCCGACATGACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAgg < 1:439548/154‑1 (MQ=255) gACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTTACCTGCCGTTAAAAACGGATCCGAATATGGCGGTGAAAGTGGGGGGGGGAGGGGAGGAAGGGGATCGGGCg > 1:618418/1‑163 (MQ=255) gACCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGGTATTTTCCCCCGCCCTTTAAAGCGGAACCGAAAATGGCGTTGGAAGAGGGGGTGGGAGGGGAGGAAGGGGCTCGGGCGACGGGCGGGGCGGGCAGAAATACGGCGAATGGCCGG‑GCAACAACC‑CGGGGGGGGGGTGAAAAGAC‑GCTGTTGTTATGCgggggaattg > 1:817762/1‑243 (MQ=255) ccccccGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCATCGGGCGACGGTCGTGGCGGACAGAATTACGGCGAAT‑GCCGGCGCAACAACT‑CGGGCGGGCGATG‑AAAGTCTGCTGTTGTTACGCGGTGATATTg < 1:152639/249‑1 (MQ=255) aCCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATgg > 1:184164/1‑80 (MQ=255) aCCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTTACCTGCCGTTAAAAGCGGGTCCGAATATGGCGTTGAAAGGGGGGGGGGGAGGGGAGGAAGGGCATCGGGCGGCGGTCGTGGGGGGCAGAATTACGGCGAAT‑GCCGGCGCCACAACC‑CCGGCGGGGGGTG‑GAAGGCTGCTGTTGTTTCGCGGGGGTATTg > 1:48171/1‑250 (MQ=255) aCCCCCGCCGTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCATCGGGCGACGGTCGTGGCGGACAGAATTACGGCGAAT‑GCCGGCGCAACAACT‑CGGGCGGGCGATG‑AAAGTCTGCTGTTGTTACGCGGTGATATTg < 1:298971/250‑1 (MQ=255) aCCCCCGCCGTCGAAACCTATGGGGGGGTGTTACGCCAAGGGGAAAAGCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCATCGGGCGACGGTCGTGGCGGACAGAATTACGGCGAAT‑GCCGGCGCAACAACT‑CGGGCGGGCGATG‑AAAGTCTGCTGTTGTTACGCGGTGATATTg < 1:794880/250‑1 (MQ=255) aCCCCCGCCGTCGAAACCTATGGGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCATCGGGCGACGGTCGTGGCGGACAGAATTACGGCGAAT‑GCCGGCGCAACAACT‑CGGGCGGGCGATG‑AAAGTCTGCTGTTGTTACGCGGTGATATTg < 1:483383/250‑1 (MQ=255) gTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGaa < 1:746897/132‑1 (MQ=255) gTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCATCGGGCGACGGTCGTGGCGGACAGAATTACGGCGAAT‑GCCGGCGCAACAACT‑cggg < 1:559770/202‑1 (MQ=255) gTCGAAACCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAACGGGTCCGAATATGGCGTTTAAAGAGGTGGGGGGAGGGGAGGAAGGGGATCGGGGGGCGGGCGGGGGGGGCAGAATTACGGCGGAA‑GTCGGCGCAAAAAAA‑CCGGCGGGCGGTG‑AAAGACTGCTggtgtttagcgggggtaatgtgtaggttgg > 1:194006/1‑227 (MQ=255) aaCCTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAACGGATCCGAATATGGCGTTGAAAGTGGTGGGGGAAGGGGAGGAAg > 1:122845/1‑137 (MQ=255) ccTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTTACCTGCCGTTAAAAGCGGGTCCGAATATGGCGTTGTAAGTGGGGGGGGGAGGGGAGGAAGGGCATCGGGGGACGGTCGGGGCGGGCAGAAATACGGGGGAT‑GGCGGCGGAACAAAC‑CGGGGGGGGGGTG‑AAAGGCTGGCGGTGTTTCGCGGGGATATTTCGCAGGTGGGCGGTaaa > 1:609862/1‑251 (MQ=255) ccTATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTTACCTGCCGGTCAAAACGGATCCGAATATGGCGGTGTAAGGGGGGGTGGAAGGTGGGGAAAGGCCTCGGGCGACGGTCGGGGCGGGGCGAAATTCGGCGCAA‑GCCGGCGCCACAACA‑CCGGCGGGGGGTG‑GCAGTTTGCTGTTTTTTCGCGGCGATAtttggccagtttgcggtaaa > 1:234407/1‑233 (MQ=255) tATGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAAGGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCATCGGGCGACGGTCGTGGCGGACAGAATTACGGCGAAT‑GCCGGCGCAACAACT‑CGGGCGGGCGATG‑AAAGTCTGCTGTTGTTACGCGGTGATATTg < 1:74820/232‑1 (MQ=255) aTGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTTACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGGGGTGGGGGGAGGGGAGGAAGGGCATCGGGGGACGGGCGTGGCGGGCAGAAATACGGGGGAA‑GCCCGCGCCACAACTCCGGGGGGGGGTGG‑AAAG‑CTTCTGTTGTTTCGCGGGGGTATTTCGCCGGTGCGCGATaaaaat > 1:891100/1‑249 (MQ=255) aTGTGGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGGGGGGGAAGGGGAGGAAAGGCATCGGGCGACGGTCGTGGCGGGCAGAAATAAGGCGAAA‑GCCGGCGCAACAAAA‑CGGGGGGGGGGTG‑AAAAGCTGCTGTTGTTACGCGGGGGGATTGCGCAGGTGCGCGGTAAAAtt > 1:89965/1‑251 (MQ=255) | AATTTTCGGAAAACGTGAAAGGCAACCCCGATTACGATCGCCGTTCGGTGGAATATATGCTGACCTTTGAGGCGGAGTAGGGCGCAATGAAAAAAACGCCGTATTTTTTGACCGCACTTTTGGGCTTATGTGTTGCACCTCACGCTTGGACGCACGCCCTTTA‑‑TGTATTTGCCCAGTATGACGGGCAAACCGTG‑ACGGGAAAATCCTATTATTCCGACATGACCCCCGCCGTCGAAACCTATGTAGAGGTGTTACGCCAAGGGGAAAATCAGCCGTTGCTGACGGGCAAAACCGACAATGGCGGTTATTTTCACCTGCCGTTAAAAGCGGATCCGAATATGGCGTTGAAAGTGGTGGTGGAAGGTGAGGAAGGGCATCGGGCGACGGTCGTGGCGGACAGAATTACGGCGAAT‑GCCGGCGCAACAACT‑CGGGCGGGCGATG‑AAAGTCTGCTGTTGTTACGCGGTGATATTGCGCAGTTGCGCGATAAAATT > 1/804995‑805485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |