| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 794,142 | T→C | P80P (CCA→CCG) | unknown ← | Exoribonuclease II (EC 3.1.13.1) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 794,142 | 0 | T | C | 98.7% | 215.0 / ‑5.5 | 78 | P80P (CCA→CCG) | unknown | Exoribonuclease II (EC 3.1.13.1) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (34/43); minor base G (1/0); total (35/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CACCAAGGCGCCAATTCATCATCGGCGTGGCAAATGAATTGGGTAATTTGCGCATAGAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATTGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATTTGTTGTTTTAATTGGGCGAGTAGGGGATTATCTTGAAACATAACGT > 1/793897‑794386 | caccaAGGCGCCAATTCATCATCGGCGTGGCAAATGAATTGGGTAATTTGCGCATAGAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTc < 1:484627/251‑1 (MQ=255) aaGGCGCCAATTCATCATCGGCGTGGCAAATGAATTGGGTAATTTGCGCATAGAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATc < 1:156835/251‑1 (MQ=255) cGGCGTGGCAAATGAATTGGGTAATTTGCGCATAGAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCt < 1:627158/251‑1 (MQ=255) aaTGAATTGGGTAATTTGCGCATAGAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCCTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑t < 1:431564/251‑1 (MQ=255) ggTAATTTGCGCATAGAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGtt > 1:361433/1‑251 (MQ=255) tttGCGCATAGAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCa > 1:181697/1‑251 (MQ=255) tGCGCATAGAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAAt < 1:674575/251‑1 (MQ=255) tGCGCATAGAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAAt < 1:605501/251‑1 (MQ=255) tGCGCATAGAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAAt < 1:799120/251‑1 (MQ=255) cgcATAGAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAg < 1:378677/251‑1 (MQ=255) gAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGgcg > 1:782347/1‑250 (MQ=255) gAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGgcg > 1:213732/1‑250 (MQ=255) aaCGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGgcgc < 1:856259/246‑1 (MQ=255) gATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTg > 1:155786/1‑251 (MQ=255) atcatcACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGt > 1:437564/1‑251 (MQ=255) tcatcaCGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACAGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGt > 1:307895/1‑250 (MQ=255) gATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTc < 1:291734/199‑1 (MQ=255) gAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAAt < 1:495649/217‑1 (MQ=255) gTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTC‑TTTTTTACGGGTTTTGTTTTCCGCGCCG‑CAATGGGGTGATTGGATATTCGGGGGATCGCCAAATACTTGTAA‑TTCCTGTCCTTAATGAAACGGCCTTTTGCGATAAAACGGGTGAAGAATGGGTTCGTTCAGGCCTT‑CGGTTTCGGCTGGTCTTTGTTCGCCCGGTTTTTCATTGGTGGCGCGGTTTTTGTCGCGGTCCTTCACtttttt > 1:320012/1‑251 (MQ=255) tGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCcg > 1:522708/1‑251 (MQ=255) tGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCcggcg > 1:268478/1‑251 (MQ=255) ccaccaCCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCcgg > 1:111635/1‑247 (MQ=255) ccaccCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTc < 1:853928/196‑1 (MQ=255) ccaccCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTc < 1:734038/236‑1 (MQ=255) ccaccCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCa > 1:317544/1‑251 (MQ=255) cccAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAg < 1:802367/198‑1 (MQ=255) ccAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATaa < 1:682017/251‑1 (MQ=255) aTCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAAt < 1:519967/251‑1 (MQ=255) aTCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAAt < 1:755509/251‑1 (MQ=255) aTCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAAt > 1:469222/1‑251 (MQ=255) ccTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGc < 1:380809/250‑1 (MQ=255) tCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATc < 1:505741/141‑1 (MQ=255) ccTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGc > 1:291394/1‑145 (MQ=255) aaCTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTc < 1:234842/251‑1 (MQ=255) gATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAATCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAAc < 1:445740/250‑1 (MQ=255) gATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAAc > 1:224943/1‑250 (MQ=255) gTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAAc > 1:889114/1‑245 (MQ=255) ggcgCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAg > 1:5022/1‑251 (MQ=255) gcgcCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGtt < 1:891156/100‑1 (MQ=255) gcgcCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAg < 1:451340/250‑1 (MQ=255) gcgcCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAg < 1:870331/250‑1 (MQ=255) gcCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTg > 1:765152/1‑250 (MQ=255) ccAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGc < 1:618209/250‑1 (MQ=255) tGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCttttt < 1:174007/251‑1 (MQ=255) gggTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAAc < 1:272735/227‑1 (MQ=255) ttgatt‑gaTATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTAcc < 1:8074/250‑1 (MQ=255) tt‑gatATTCGGGTGATCGACCAATACCTGTGATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGc > 1:198406/1‑250 (MQ=255) gatATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCt < 1:345333/226‑1 (MQ=255) gatATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCCTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATc > 1:248697/1‑231 (MQ=255) atatTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATc > 1:662762/1‑230 (MQ=255) atatTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCtt > 1:722155/1‑250 (MQ=255) atatTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTc < 1:661500/251‑1 (MQ=255) tGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTc < 1:74471/251‑1 (MQ=255) gATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATc < 1:4328/220‑1 (MQ=255) aCCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACAt > 1:859094/1‑192 (MQ=255) aCCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTg > 1:121105/1‑249 (MQ=255) aCCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTg > 1:196595/1‑249 (MQ=255) aCCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTg > 1:290789/1‑249 (MQ=255) tACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCcac < 1:710695/234‑1 (MQ=255) cTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATaa > 1:481213/1‑164 (MQ=255) tttCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTgg < 1:568746/107‑1 (MQ=255) ttCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATttgttg < 1:421143/251‑1 (MQ=255) cTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATTTGTTGTTTTAAt < 1:246904/251‑1 (MQ=255) cTTTATTGAACCGCACTTTGGCGATAAAACGGGCG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATTAAATAGCTTTTTTTGTCACATTTTAAAAAACCGTTAGCTTTATCAGTGCTTTTTACCGTGCCTTTCACAAGTTCTTTGCTGTctttttcttatacacatct > 1:626714/1‑232 (MQ=255) ttATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAAt < 1:701904/151‑1 (MQ=255) ttATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAAt < 1:450941/151‑1 (MQ=255) ttATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTAc > 1:345866/1‑203 (MQ=255) ttGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATTTGTTGTTTTAATTGGGc < 1:665904/251‑1 (MQ=255) gAACCGCACTTTGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAAt > 1:194161/1‑146 (MQ=255) tttGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATTTGTTGTTTTAATTGGGCGAGTAGGGGAt < 1:758056/251‑1 (MQ=255) tttGGCGATAAAACGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATTTGTTGTTTTAATTGGGCGAGTAGGGGAt < 1:59643/251‑1 (MQ=255) aaCGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATTTGTTGTTTTAATTGGGCGAGTAGGGGATTATCTTGAAAc < 1:585818/251‑1 (MQ=255) cGGGTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATTTGTTGTTTTAATTGGGCGAGTAGGGGa > 1:250611/1‑237 (MQ=255) ggTG‑AGTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATTTGTTGTTTTAATTGGGCGAGTAGGGGAt > 1:47880/1‑236 (MQ=255) gTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACg < 1:241249/184‑1 (MQ=255) gTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATTTGTTGTTTTAATTGGGCGAGTAggg > 1:745313/1‑228 (MQ=255) gTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATTTGTTGTTTTAATTGGGCGAGTAGGGGATTATCTTGAAACATAACGt > 1:326397/1‑249 (MQ=255) gTATCGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATTTGTTGTTTTAATTGGGCGAGTAGGGGATTATCTTGAAACATAACGt > 1:611495/1‑249 (MQ=255) | CACCAAGGCGCCAATTCATCATCGGCGTGGCAAATGAATTGGGTAATTTGCGCATAGAAAAAACGATCATCACGCAGCGGATGAGTTTTAAGTGATGCCACCACCCAATCGCCTTCCTGTAACTCTTTTTTTAC‑GGATTTGTTTTGCGCGGCGCCAATGGGTTGATT‑GATATTCGGGTGATCGACCAATACCTGTAATTTCTTGTCTTTATTGAACCGCACTTTGGCGATAAAACGGGTG‑AGTATTGGTTCGATCAGGGCTTCCGGTTCCGCTTGTTCTTTG‑TCGCCCTGTTTTTCAATAGTGGCGCTGATTTTGTCGCCGTGCATCACTTTTTTCATTGCCGGCGGTGCAATAAAATAGCTTTTTTTGTCACATTCTAAAAAACCGTAAGCTTTATCAGTGCTTTTTACCGTGCCTTCCACACGTTCTTTGCTGTCGTGAATTTGTTGTTTTAATTGGGCGAGTAGGGGATTATCTTGAAACATAACGT > 1/793897‑794386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |