Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 752,425 T→C Y184Y (TAT→TAC)  unknown → Multidrug efflux transporter MdtK/NorM (MATE family)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1752,4250TC100.0% 176.9 / NA 64Y184Y (TAT→TAC) unknownMultidrug efflux transporter MdtK/NorM (MATE family)
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (31/33);  total (31/33)

TTAGCTGCATTCCGCTGGTGTGGCTGATTTATAGCAGCGATTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTATGGCAAATTGGGTGTGTCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTTCCCATTGCCATGGCGTTGTGCTGTGAAGTAGCATTGTTTGCGCTAACCTCTTTA  >  1/752178‑752671
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                      
ttAGCTGCATTCCGCTGGTGTGGCTGATTTATAGCAGCGATTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGc                                                                                                                                                                                                                                                     <  1:345708/251‑1 (MQ=255)
      gCATTCCGCTGGTGTGGCTGATTTATAGCAGCGATTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTg                                                                                                                                                                                                                                               >  1:749823/1‑251 (MQ=255)
      gCATTCCGCTGGTGTGGCTGATTTATAGCAGCGATTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTg                                                                                                                                                                                                                                               >  1:741613/1‑251 (MQ=255)
         ttCCGCTGGTGTGGCTGATTTATAGCAGCGATTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGgt                                                                                                                                                                                                                                            >  1:258315/1‑251 (MQ=255)
           ccGCTGGTGTGGCTGATTTATAGCAGCGATTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGgtgt                                                                                                                                                                                                                                          >  1:299905/1‑251 (MQ=255)
                  tgtgGCTGATTTATAGCAGCGATTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGgtgtgcc                                                                                                                                                                                                                                       <  1:384918/247‑3 (MQ=255)
                         gATTTATAGCAGCGATTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGgcg                                                                                                                                                                                                                            >  1:485086/1‑251 (MQ=255)
                         gATTTATAGCAGCGATTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGgcg                                                                                                                                                                                                                            >  1:826190/1‑251 (MQ=255)
                          aTTTATAGCAGCGATTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGgcg                                                                                                                                                                                                                            >  1:6239/1‑250 (MQ=255)
                          aTTTATAGCAGCGATTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGgcg                                                                                                                                                                                                                            >  1:439368/1‑250 (MQ=255)
                                       aTTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTgg                                                                                                                                                                                                               >  1:782654/1‑250 (MQ=255)
                                       aTTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTgg                                                                                                                                                                                                               >  1:295560/1‑250 (MQ=255)
                                        tttCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCa                                                                                                                                                                                                             <  1:719904/251‑1 (MQ=255)
                                                            aCATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCt                                                                                                                                                                                                                   <  1:49766/225‑1 (MQ=255)
                                                            aCATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAAc                                                                                                                                                                                         <  1:752264/251‑1 (MQ=255)
                                                                      acGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGAtgt                                                                                                                                                                               >  1:436082/1‑251 (MQ=255)
                                                                       cGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGAtgtg                                                                                                                                                                              <  1:700118/251‑1 (MQ=255)
                                                                             gCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGt                                                                                                                                                                         <  1:609479/250‑1 (MQ=255)
                                                                                  cATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGt                                                                                                                                                                         <  1:644/245‑1 (MQ=255)
                                                                                   aTTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGtt                                                                                                                                                                  <  1:262259/251‑1 (MQ=255)
                                                                                    ttACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGgtgt                                                                                                                                                                                                                                          >  1:109083/1‑178 (MQ=255)
                                                                                    ttACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTg                                                                                                                                                                 >  1:567513/1‑251 (MQ=255)
                                                                                        tATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCAt                                                                                                                                                             <  1:508824/251‑1 (MQ=255)
                                                                                          tCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATAc                                                                                                                                                           <  1:224561/251‑1 (MQ=255)
                                                                                             gTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTg                                                                                                                                                         <  1:477162/250‑1 (MQ=255)
                                                                                             gTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTg                                                                                                                                                         <  1:12072/250‑1 (MQ=255)
                                                                                             gTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTg                                                                                                                                                         <  1:53651/250‑1 (MQ=255)
                                                                                                  ttGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCg                                                                                                                                                   <  1:670065/251‑1 (MQ=255)
                                                                                                  ttGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCg                                                                                                                                                   <  1:804952/251‑1 (MQ=255)
                                                                                                             ggTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCg                                                                                                                                                   <  1:196464/240‑1 (MQ=255)
                                                                                                              gTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATAc                                                                                                                                                           <  1:517257/231‑1 (MQ=255)
                                                                                                              gTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGaaaaa                                                                                                                                          <  1:666131/248‑1 (MQ=255)
                                                                                                              gTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCa                                                                                                                                       >  1:99861/1‑251 (MQ=255)
                                                                                                                           cGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAg                                                                                                                          <  1:154280/251‑1 (MQ=255)
                                                                                                                             ggCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCggg                                                                                                                                                 >  1:370089/1‑226 (MQ=255)
                                                                                                                                            gTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGACCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATg                                                                                                                                                     >  1:461630/1‑207 (MQ=255)
                                                                                                                                                aTTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGaa                                                                                                     <  1:685837/251‑1 (MQ=255)
                                                                                                                                                aTTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGaa                                                                                                     <  1:375180/251‑1 (MQ=255)
                                                                                                                                                         gttTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAAc                                                                                                                                                                                         <  1:814243/158‑1 (MQ=255)
                                                                                                                                                         gttTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAAt                                                                                            >  1:47134/1‑251 (MQ=255)
                                                                                                                                                                  aCGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGacgcacg                                                                                   >  1:391110/1‑251 (MQ=255)
                                                                                                                                                                   cGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCa                                                                                                                                                                                                  <  1:727227/139‑1 (MQ=255)
                                                                                                                                                                   cGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGacgcacgc                                                                                  <  1:645691/251‑1 (MQ=255)
                                                                                                                                                                     gCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGacgcacg                                                                                   >  1:113577/1‑248 (MQ=255)
                                                                                                                                                                               aaCTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTg                                                                       >  1:395344/1‑250 (MQ=255)
                                                                                                                                                                                          cGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAAc                                                                                                                                                                                         >  1:223480/1‑125 (MQ=255)
                                                                                                                                                                                                 gATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCg                                                                                                                                                   <  1:889892/156‑1 (MQ=255)
                                                                                                                                                                                                 gATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTCCCCa                                                    >  1:291954/1‑251 (MQ=255)
                                                                                                                                                                                                     aCCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTCCCCATTGc                                                <  1:461352/251‑1 (MQ=255)
                                                                                                                                                                                                      ccTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTCCCCATTg                                                 >  1:163974/1‑249 (MQ=255)
                                                                                                                                                                                                               gCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTCCCCATTGCTATGGCGTtg                                      >  1:371/1‑251 (MQ=255)
                                                                                                                                                                                                                 ttGCTGATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTCCCCATTGc                                                >  1:320600/1‑239 (MQ=255)
                                                                                                                                                                                                                      gATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAGATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTCCCCATTGCTATGGCGTTGTGCtgtg                               >  1:423713/1‑251 (MQ=255)
                                                                                                                                                                                                                      gATCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTg                                                                                                       >  1:190999/1‑179 (MQ=255)
                                                                                                                                                                                                                        tCAATATTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTCCCCATTGCTATGGCGTTGTGCTGTGaa                             >  1:74295/1‑251 (MQ=255)
                                                                                                                                                                                                                           atatTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAgg                                                                                                                         >  1:635929/1‑156 (MQ=255)
                                                                                                                                                                                                                           atatTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTg                                                                                                       <  1:598748/174‑1 (MQ=255)
                                                                                                                                                                                                                           atatTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAg                                                                                          <  1:688606/187‑1 (MQ=255)
                                                                                                                                                                                                                           atatTCCTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGacgca                                                                                     <  1:608080/192‑1 (MQ=255)
                                                                                                                                                                                                                                ccTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTCCCCATTGCTATGGCg                                         >  1:266794/1‑231 (MQ=255)
                                                                                                                                                                                                                                ccTCTTAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTCCCCATTGCTATGGCGTTGTGc                                   <  1:200338/237‑1 (MQ=255)
                                                                                                                                                                                                                                   ctTAATTATATTTTTATTTCCGGCAAATGTGGTTTGCCGGCTTTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTTTCTGTTGATGTTGGCATCCTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTCCCCATTGCTATGGCGTTGTGCTGTGAAg                            <  1:238474/241‑1 (MQ=255)
                                                                                                                                                                                                                                     tAATTATATTTTTATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTCCCCATTGct                                               <  1:355430/220‑2 (MQ=255)
                                                                                                                                                                                                                                             tttttATTTACGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAAc                                                                                                                                                                                         >  1:151374/1‑74 (MQ=255)
                                                                                                                                                                                                                                                   tttacGGCAAATTGGGTGTGCCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTCCCCATTGCTATGGCGTTGTGCTGTGAAGTAGCATTGTTTGCGCTAACCTCTTTa  <  1:326364/251‑1 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                      
TTAGCTGCATTCCGCTGGTGTGGCTGATTTATAGCAGCGATTTCGTACTACAAAAAATGGACATGGAACAACGCTTGGCGGACATTACTATCGGTTATTTGCACGCCATGGTTTGGGGCTTGCCGGGCTATTTGTTGATGGTGAATTTTCGTTGTTTAAATGACGGCATCGCGAAAACTAAACCAGCGATGGTGATCACCTTTCTCGGCTTGCTGATCAATATTCCTCTTAATTATATTTTTATTTATGGCAAATTGGGTGTGTCGGCATTCGGCGCCGTGGGCTGTGGCATTGCCACGGCAATTGTAAACTGGGTGATGTGTCTGTTGATGTTGGCATACTGTATGCGGGCGAAAAATCAACGTGATTTGAAGGTTTTCGCAAATATCATTGAACGCCCGAATAGACGCACGCTGGGGAAATTGCTGAAGCTGGGTTTTCCCATTGCCATGGCGTTGTGCTGTGAAGTAGCATTGTTTGCGCTAACCTCTTTA  >  1/752178‑752671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑