Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 740,090 G→A N251N (AAC→AAT)  unknown ← Maltodextrin ABC transporter, substrate‑binding protein MdxE

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1740,0900GA100.0% 190.3 / NA 70N251N (AAC→AAT) unknownMaltodextrin ABC transporter, substrate‑binding protein MdxE
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (36/34);  total (36/34)

TTGGTAGGATTTCAATGCCACAGCGCCTAGTGGTTTGTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGACCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCGTTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACAAA‑TTTGAAGGCATAACCGCCGTTAGAAGCGACGATAGGCCAAGTGAAATACGGCTCGGACAGGTTCCACATA  >  1/739847‑740330
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                   
ttGGTAGGATTTCAATGCCACAGCGCCTAGTGGTTTGTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTTCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATgg                                                                                                                                                                                                                                              <  1:108996/251‑1 (MQ=255)
ttGGTAGGATTTCAATGCCACAGCGCCTAGTGGTTTGTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGTGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATgg                                                                                                                                                                                                                                              <  1:415300/251‑1 (MQ=255)
ttGGTAGGATTTCAATGCCACAGCGCCTAGTGGTTTGTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATgg                                                                                                                                                                                                                                              <  1:131955/251‑1 (MQ=255)
   gTAGGATTTCAATGCCACAGCGCCTAGTGGTTTGTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGtt                                                                                                                                                                                                                                            <  1:145745/250‑1 (MQ=255)
   gTAGGATTTCAATGCCACAGCGCCTAGTGGTTTGTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTa                                                                                                                                                                                                                                           >  1:296331/1‑251 (MQ=255)
        aTTTCAATGCCACAGCGCCTAGTGGTTTGTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAAcgc                                                                                                                                                                                                                                       <  1:881019/250‑1 (MQ=255)
         tttCAATGCCACAGCGCCTAGTGGTTTGTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTa                                                                                                                                                                                                                                                  >  1:600922/1‑238 (MQ=255)
            cAATGCCACAGCGCCTAGTGGTTTGTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCAt                                                                                                                                                                                                                                  >  1:642964/1‑251 (MQ=255)
                              tGGTTTGTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGc                                                                                                                                                                                                                  <  1:300406/249‑1 (MQ=255)
                                  ttGTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTc                                                                                                                                                                                                            <  1:657928/251‑1 (MQ=255)
                                    gTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCcg                                                                                                                                                                                                          >  1:147925/1‑251 (MQ=255)
                                          aTTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATgg                                                                                                                                                                                                    >  1:463021/1‑251 (MQ=255)
                                               cGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAg                                                                                                                                                                                               <  1:329043/251‑1 (MQ=255)
                                                 gTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGt                                                                                                                                                                                              >  1:519786/1‑250 (MQ=255)
                                                 gTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCACAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGt                                                                                                                                                                                              >  1:765377/1‑250 (MQ=255)
                                                  tttCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTc                                                                                                                                                                                             <  1:175746/250‑1 (MQ=255)
                                                  tttCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTc                                                                                                                                                                                             <  1:562748/250‑1 (MQ=255)
                                                  tttCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTc                                                                                                                                                                                             <  1:23194/250‑1 (MQ=255)
                                                       aaaCCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATGCCGGCATTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATc                                                                                                                                                                                       <  1:428079/251‑1 (MQ=255)
                                                       aaaCCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATc                                                                                                                                                                                       <  1:48904/251‑1 (MQ=255)
                                                            gTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGgcg                                                                                                                                                                                   >  1:309321/1‑250 (MQ=255)
                                                                  ggTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCtgatga                                                                                                                                                                            >  1:426319/1‑251 (MQ=255)
                                                                       aCAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGAc                                                                                                                                                                           >  1:546675/1‑247 (MQ=255)
                                                                           gTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTAtttt                                                                                                                                                                   >  1:426425/1‑251 (MQ=255)
                                                                           gTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTAtttt                                                                                                                                                                   >  1:387707/1‑251 (MQ=255)
                                                                            tAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTAtttt                                                                                                                                                                   <  1:339921/250‑1 (MQ=255)
                                                                            tAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTAtttt                                                                                                                                                                   <  1:75034/250‑1 (MQ=255)
                                                                                 ttCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑a                                                                                                                                                            >  1:570426/1‑251 (MQ=255)
                                                                                                    agaTCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATc                                                                                                                                                                                       <  1:377200/206‑1 (MQ=255)
                                                                                                      aTCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATgg                                                                                                                                                                                                                                              <  1:67863/149‑1 (MQ=255)
                                                                                                      aTCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGCCATTGTGATCGTTTAAGGCCGGCAACACGGCAACGCCGTATTTGTTTTTGCTTTTTTCAATGTTCCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCACCCCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTcc                                                                                                                                                                                            >  1:644637/1‑199 (MQ=255)
                                                                                                       tCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATc                                                                                                                                                                                       <  1:242752/203‑1 (MQ=255)
                                                                                                       tCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAggg                                                                                                                                       >  1:337973/1‑250 (MQ=255)
                                                                                                                   cTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAAcc                                                                                                                          <  1:626965/251‑1 (MQ=255)
                                                                                                                         gAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATc                                                                                                                                                                                       >  1:182476/1‑185 (MQ=255)
                                                                                                                           gTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGtt                                                                                                                                                                                                                                            <  1:272727/130‑1 (MQ=255)
                                                                                                                           gTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAAc                                                                                                                                                                                                                                         >  1:541474/1‑133 (MQ=255)
                                                                                                                           gTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGtt                                                                                                                                                                                                                        >  1:448536/1‑150 (MQ=255)
                                                                                                                           gTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGc                                                                                                                                      >  1:858590/1‑231 (MQ=255)
                                                                                                                            ttAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCg‑ttg                                                                                                                  <  1:360468/249‑1 (MQ=255)
                                                                                                                               aTACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAAcgc                                                                                                                                                                                                                                       <  1:571376/131‑1 (MQ=255)
                                                                                                                                tACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACg                                                                                                            >  1:635447/1‑251 (MQ=255)
                                                                                                                                  ccGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGcc                                                                                                          <  1:337520/251‑1 (MQ=255)
                                                                                                                                      cACTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATg                                                                                                      >  1:856649/1‑251 (MQ=255)
                                                                                                                                       aCTTAACACGCCGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGt                                                                                                     <  1:674356/251‑1 (MQ=255)
                                                                                                                                                 ccGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGt                                                                                            <  1:499255/250‑1 (MQ=255)
                                                                                                                                                 ccGACGAACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGt                                                                                            <  1:343674/250‑1 (MQ=255)
                                                                                                                                                     cgaACGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCatat                                                                                       <  1:808436/251‑1 (MQ=255)
                                                                                                                                                         cGGTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGC‑TTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGc                                                                                   >  1:72988/1‑250 (MQ=255)
                                                                                                                                                           gTTTGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAAt                                                                                              >  1:727032/1‑238 (MQ=255)
                                                                                                                                                             ttGGCATTGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGtt                                                                               >  1:187181/1‑251 (MQ=255)
                                                                                                                                                                   ttGTGATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACaaa                                                                         <  1:224602/251‑1 (MQ=255)
                                                                                                                                                                     gtgATCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATg                                                                                             >  1:451145/1‑229 (MQ=255)
                                                                                                                                                                          cGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCatat                                                                                       >  1:154498/1‑230 (MQ=255)
                                                                                                                                                                          cGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACAAA‑TTTGAAg                                                                 >  1:494118/1‑251 (MQ=255)
                                                                                                                                                                           gTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGc                                                                                                                                      >  1:223779/1‑183 (MQ=255)
                                                                                                                                                                                  gTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAAcgc                                                                                                                                                                                                                                       >  1:552452/1‑80 (MQ=255)
                                                                                                                                                                                   tCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACAAA‑TTTGAAGGCATAAcc                                                         <  1:365906/250‑1 (MQ=255)
                                                                                                                                                                                                  cGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTcc                                                                                                                                                                                            <  1:467269/107‑1 (MQ=255)
                                                                                                                                                                                                    ccGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACAAA‑TTTGAAgg                                                                <  1:135822/226‑1 (MQ=255)
                                                                                                                                                                                                    ccGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACAAA‑TTTGAAGGCATAACCGCCGTTAGAAGCGACGAt                                       >  1:163025/1‑251 (MQ=255)
                                                                                                                                                                                                      gTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACAAA‑TTTGAAGGCATAACCGCCGTTAGAAGCGACGATAg                                     >  1:81208/1‑251 (MQ=255)
                                                                                                                                                                                                        aaTTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCatat                                                                                       <  1:201988/200‑1 (MQ=255)
                                                                                                                                                                                                                       tctcAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCtt                                                                                                                                    <  1:462990/141‑1 (MQ=255)
                                                                                                                                                                                                                       tctcAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACAAA‑TTTGAAGGCATAAcc                                                         >  1:121212/1‑214 (MQ=255)
                                                                                                                                                                                                                       tctcAATGTTGCCCCAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACAAA‑TTTGAAGGCATAACCGCCGTTAGAAGCGACGATAGGCCAAGTGAAATAc                       >  1:242729/1‑248 (MQ=255)
                                                                                                                                                                                                                                  ccccAAGACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACAAA‑TTTGAAGGCATAACCGCCGTTAGAAGCGACGATAGGCCAAGTGAAATACGGCTCGGACAgggt         >  1:102180/1‑249 (MQ=255)
                                                                                                                                                                                                                                        gACCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACAAA‑TTTGAAGGCATAACCGCCGTTAGAAGCGACGATAGGCCAAGTGAAATACGGCTCGGACAGGTTCCACAt   >  1:856191/1‑251 (MQ=255)
                                                                                                                                                                                                                                         ccaaaGGACCATTATTGTTTACCGCCGCATCGCTTTTTTAAAATCCCGCTCCCGGGATGGCATAGTCCATAGGGGCGGTGATG‑TTTTTTTTTTCCCCAATATCCCCCACGAATTGCGGGTTTTTTTGTG‑ACCTTTGTTTGTTTCCGCCGATGTCGTAAATGTTATTTTTGCCG‑TGAAAAATTTTGAGGGCATAACCGCCGTTAGAAGCGACGATAGGCCAAGTGAAATACGGCTCGGACAGGTTCCACAt   <  1:746765/247‑1 (MQ=255)
                                                                                                                                                                                                                                         aCCAAGGACCATTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACAAA‑TTTGAAGGCATAACCGCCGTTAGAAGCGACGATAGGCCAAGTGAAATACGGCTCGGACAGGGTCcacagt  >  1:241019/1‑249 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                   
TTGGTAGGATTTCAATGCCACAGCGCCTAGTGGTTTGTCTTTATTGACGGTTTCCAAACCGTCATCGGTCAACAGGTAGTTTTCCATGAATTCCACCGCGAGATCTTTGTTCGGGCTGGCGGAGTTAATACCGGCACTTAACACGCCGACGAACGGTTTGGCATTGTGACCGTTTAAGGTCGGCAACACGGCAACGCCGTAATTGATTTTGCTTTTCTCAATGTTGCCCCAAGACCAAGGACCGTTAATGGTTAACGCCGCATCGCCTTTGTTAAATGCCGCTTCCGCGATGGCATAGTCCATATCGGCGCTGATGACTTTATTTTTCACC‑ATATTCACCACGAATTGCAGGGCTTTTTGTGAACCTTCG‑TTGTTTACGCCGATGTCGTTAATGTCATATTTGCCGTTGACAAA‑TTTGAAGGCATAACCGCCGTTAGAAGCGACGATAGGCCAAGTGAAATACGGCTCGGACAGGTTCCACATA  >  1/739847‑740330

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑