Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 739,563 T→C intergenic (‑35/+89) unknown ← / ← unknown Maltodextrin ABC transporter, permease protein MdxF/Maltodextrin ABC transporter, substrate‑binding protein MdxE

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1739,5630TC100.0% 192.1 / NA 69intergenic (‑35/+89)unknown/unknownMaltodextrin ABC transporter, permease protein MdxF/Maltodextrin ABC transporter, substrate‑binding protein MdxE
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (37/32);  total (37/32)

GGGATACACATAACGCCATGCGTACACTTTTTTGCTGCTGAAAATGTACACGCCGGAAGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTATGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTGGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCGGCATGATTTCACCGTTTTTCGCATTTTCCA  >  1/739319‑739809
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                      
gggATACACATAACGCCATGCGTACACTTTTTTGCTGCTGAAAATGTACACGCCGGAAGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATa                                                                                                                                                                                                                                                  >  1:343425/1‑251 (MQ=255)
      cacaTAACGCCATGCGTACACTTTTTTGCTGCTGAAAATGTACACGCCGGAAGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGaaaa                                                                                                                                                                                                                                             >  1:283218/1‑250 (MQ=255)
      cacaTAACGCCATGCGTACACTTTTTTGCTGCTAAAAATGTACACGCCGGAAGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGAATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGaaaa                                                                                                                                                                                                                                             >  1:435500/1‑250 (MQ=255)
       acaTAACGCCATGCGTACACTTTTTTGCTGCTGAAAATGTACACGCCGGAAGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGCTTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGaaa                                                                                                                                                                                                                                              >  1:452181/1‑248 (MQ=255)
       acaTAACGCCATGCGTACACTTTTTTGCTGCTGAAAATGTACACGCCGGAAGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAaca                                                                                                                                                                                                                                           >  1:238620/1‑251 (MQ=255)
                                tgctgcTGAAAATGTACACGCCGGAAGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAGCAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTg                                                                                                                                                                                                                  <  1:875217/251‑1 (MQ=255)
                                        aaaaTGTACACGCCGGAAGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTa                                                                                                                                                                                                          <  1:329388/251‑1 (MQ=255)
                                          aaTGTACACGCCGGAAGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAGAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAAt                                                                                                                                                                                                        >  1:427017/1‑251 (MQ=255)
                                                  cGCCGGAAGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGaa                                                                                                                                                                                                >  1:327565/1‑251 (MQ=255)
                                                     cGGAAGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCg                                                                                                                                                                                             <  1:5785/251‑1 (MQ=255)
                                                         aGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAAtt                                                                                                                                                                                                                                  <  1:637812/210‑1 (MQ=255)
                                                           tCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCaa                                                                                                                                                                                         <  1:178556/249‑1 (MQ=255)
                                                                        ggTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGaaa                                                                                                                                                                                                                                              <  1:320256/183‑1 (MQ=255)
                                                                        ggTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAAc                                                                                                                                                                                               <  1:118199/230‑1 (MQ=255)
                                                                        ggTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACAt                                                                                                                                                                          >  1:71152/1‑251 (MQ=255)
                                                                             aaaTGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGc                                                                                                                                                                     <  1:193805/251‑1 (MQ=255)
                                                                                       cAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTAtt                                                                                                                                                           >  1:260805/1‑251 (MQ=255)
                                                                                       cAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTAtt                                                                                                                                                           >  1:335685/1‑251 (MQ=255)
                                                                                         aaTATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAAtg                                                                                                                                                                                                       >  1:382444/1‑205 (MQ=255)
                                                                                         aaTATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTAttgt                                                                                                                                                         <  1:391540/251‑1 (MQ=255)
                                                                                          gtttggaaaccgtcaataaagacaaaCCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTAttgtt                                                                                                                                                        >  1:679047/24‑251 (MQ=255)
                                                                                           tatTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGaaa                                                                                                                                                                                                                                              >  1:362014/1‑164 (MQ=255)
                                                                                           tatTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGcac                                                                                                                                                                            <  1:200158/230‑1 (MQ=255)
                                                                                           tatTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGttt                                                                                                                                                              >  1:152748/1‑244 (MQ=255)
                                                                                                            cATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGaaa                                                                                                                                                                                                                                              >  1:524556/1‑147 (MQ=255)
                                                                                                            cATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGcac                                                                                                                                                                            >  1:571591/1‑213 (MQ=255)
                                                                                                            cATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTgcg                                                                                                                                       >  1:744093/1‑250 (MQ=255)
                                                                                                                     cACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGt                                                                                                                             >  1:875247/1‑251 (MQ=255)
                                                                                                                      aCTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAAc                                                                                                                                                                                               <  1:402095/184‑1 (MQ=255)
                                                                                                                           atatAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCt                                                                                                                                                                    >  1:609562/1‑206 (MQ=255)
                                                                                                                           atatAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATAc                                                                                                                                            <  1:783280/230‑1 (MQ=255)
                                                                                                                           atatAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGc                                                                                                                                  <  1:816255/240‑1 (MQ=255)
                                                                                                                           atatAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAgg                                                                                                                       <  1:782402/251‑1 (MQ=255)
                                                                                                                           atatAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAgg                                                                                                                       >  1:285599/1‑251 (MQ=255)
                                                                                                                                aGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCAc                                                                                                                                                                                                                             <  1:241061/144‑1 (MQ=255)
                                                                                                                                 gTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATtc                                                                                                                                                                                      <  1:30684/182‑1 (MQ=255)
                                                                                                                                 gTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGtt                                                                                                                 >  1:829429/1‑251 (MQ=255)
                                                                                                                                  tcaatcaaCAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGtt                                                                                                                 <  1:869641/250‑1 (MQ=255)
                                                                                                                                       caacaaTACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACg                                                                                                            >  1:176199/1‑250 (MQ=255)
                                                                                                                                         acaaTACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCttagt                                                                                                                                                                <  1:649990/196‑4 (MQ=255)
                                                                                                                                            aTACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTga                                                                                                      >  1:276898/1‑251 (MQ=255)
                                                                                                                                                 acgCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAg                                                                                                                                                                       <  1:369909/181‑1 (MQ=255)
                                                                                                                                                          aaCAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGc                                                                                                                      <  1:852060/221‑1 (MQ=255)
                                                                                                                                                           aCAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCa                                                                                       <  1:257047/251‑1 (MQ=255)
                                                                                                                                                                 atTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGATGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCattgcca                                                                                 <  1:6491/251‑2 (MQ=255)
                                                                                                                                                                                            cTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAg                                                      <  1:860002/251‑1 (MQ=255)
                                                                                                                                                                                             ttGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAgg                                                     <  1:194519/251‑1 (MQ=255)
                                                                                                                                                                                                      agaTTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCAtt                                             <  1:509163/250‑1 (MQ=255)
                                                                                                                                                                                                        aTTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTg                                           <  1:471129/250‑1 (MQ=255)
                                                                                                                                                                                                         ttgttgCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTgcg                                         >  1:690329/1‑251 (MQ=255)
                                                                                                                                                                                                          tgttgCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTgcgc                                        <  1:894926/251‑1 (MQ=255)
                                                                                                                                                                                                              gCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGc                                                                                                                      <  1:474552/169‑1 (MQ=255)
                                                                                                                                                                                                              gCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGc                                                    <  1:667205/235‑1 (MQ=255)
                                                                                                                                                                                                              gCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGata                                    >  1:767801/1‑251 (MQ=255)
                                                                                                                                                                                                              gCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGata                                    >  1:864866/1‑251 (MQ=255)
                                                                                                                                                                                                              gCATAAAACACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGata                                    >  1:156980/1‑251 (MQ=255)
                                                                                                                                                                                                                   aaaCACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCgg                               >  1:354678/1‑251 (MQ=255)
                                                                                                                                                                                                                    aaCACCTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCGGc                              <  1:580741/251‑1 (MQ=255)
                                                                                                                                                                                                                        ccTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCGGCATGa                          >  1:757570/1‑251 (MQ=255)
                                                                                                                                                                                                                         cTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCGGCATGAt                         >  1:240810/1‑251 (MQ=255)
                                                                                                                                                                                                                         cTCGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGCTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAACGCACTCATTTGCGCGATATTCGGCATGAt                         >  1:475122/1‑251 (MQ=255)
                                                                                                                                                                                                                           cGAGAACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGc                                                                                                           >  1:38077/1‑167 (MQ=255)
                                                                                                                                                                                                                             agaACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCGGCATGATTTc                      <  1:309125/250‑1 (MQ=255)
                                                                                                                                                                                                                              gaACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCGGCATGAtt                        <  1:785903/247‑1 (MQ=255)
                                                                                                                                                                                                                              gaACAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCGGCATGATTTCa                     >  1:702479/1‑250 (MQ=255)
                                                                                                                                                                                                                                 cAGAATGACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCGGCATGATTTCACCGt                 >  1:62741/1‑251 (MQ=255)
                                                                                                                                                                                                                                       gACTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCGGCATGATTTCACCGTTTTTCg           >  1:77449/1‑251 (MQ=255)
                                                                                                                                                                                                                                         cTAATCGGCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCTATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCGGCATGATTTCACCGTTTTTCGCa         >  1:30879/1‑251 (MQ=255)
                                                                                                                                                                                                                                                gCTACGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTAGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGATGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCGGCATGATTTCACCGTTTTTCGCATTTTCCa  >  1:116191/1‑251 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                      
GGGATACACATAACGCCATGCGTACACTTTTTTGCTGCTGAAAATGTACACGCCGGAAGTCAGAATCACCAAGGTTAAAATGGCGAACAAATATTCTCCCTGCGAATACATTAAAACCACTAAATATAAGTCAATCAACAATACGACGCCGGCTAACAAATATTTCAGCCACGGGGATTGCGATGTCGCTTGAGTCGGAGATTGTTGCATAAAACACCTCGAGAACAGAATGACTAATCGGCTATGGCATAGAAAACACTAAAAATTTGCACCGCACTTTTTGAATTGTTAATGTGCCGAACCGTCAATTCGGCTCGGCACATCAGGCTTGGTTTATTGTTGTTTTTGGATACGTGCGCGGGCATCGTCCAAGGCTTGTTTTACGCTTTGACGACCGCTGACGGCATTGCCGATTGCCGCTTTTTCGGCATACCAGAAGGCACTCATTTGCGCGATATTCGGCATGATTTCACCGTTTTTCGCATTTTCCA  >  1/739319‑739809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑