| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 733,749 | T→C | T647T (ACT→ACC) | unknown → | ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) / ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 733,749 | 0 | T | C | 100.0% | 254.3 / NA | 88 | T647T (ACT→ACC) | unknown | ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) / ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (44/44); total (44/44) | |||||||||||
TCCGACTTTGGATGAAGCGGGTTATACGCTAAAAGCGAGCAGTTTTCAGGTATTACGCTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACTCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCATTTTGCGTCTGATTGCGGGGCTAGAAGAGC > 1/733506‑733991 | tCCGACTTTGGATGAAGCGGGTTATACGCTAAAAGCGAGCAGTTTTCAGGTATTACGCTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATtg < 1:770784/251‑1 (MQ=255) aGCGGGTTATACGCTAAAAGCGAGCAGTTTTCAGGTATTACGCTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTgg > 1:83108/1‑251 (MQ=255) gggTTATACGCTAAAAGCGAGCAGTTTTCAGGTATTACGCTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGatgatg < 1:334368/244‑1 (MQ=255) ggTTATACGCTAAAAGCGAGCAGTTTTCAGGTATTACGCTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGtgatg < 1:745957/240‑1 (MQ=255) tataCGCTAAAAGCGAGCAGTTTTCAGGTATTACGCTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTgg < 1:273499/251‑1 (MQ=255) taCGCTAAAAGCGAGCAGTTTTCAGGTATTACGCTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGat < 1:86973/251‑1 (MQ=255) cGCTAAAAGCGAGCAGTTTTCAGGTATTACGCTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGtgatg > 1:6243/1‑233 (MQ=255) cGCTAAAAGCGAGCAGTTTTCAGGTATTACGCTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGatta < 1:21722/251‑1 (MQ=255) cTAAAAGCGAGCAGTTTTCAGGTA‑TACGCTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTc < 1:678102/251‑1 (MQ=255) tttCAGGTATTACGCTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGat < 1:779232/232‑1 (MQ=255) cTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTg > 1:134086/1‑250 (MQ=255) cTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTg > 1:817780/1‑250 (MQ=255) ttattaTTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCag < 1:275941/251‑1 (MQ=255) ttattaTTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCag > 1:729641/1‑251 (MQ=255) ttattaTTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGCGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCag > 1:192101/1‑251 (MQ=255) attCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGaaa > 1:893823/1‑251 (MQ=255) gCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGAtctc > 1:842941/1‑232 (MQ=255) tATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGa > 1:255395/1‑250 (MQ=255) aaaCCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGacagaac < 1:397085/251‑1 (MQ=255) gCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTg > 1:224509/1‑251 (MQ=255) gTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTg > 1:561626/1‑181 (MQ=255) gTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGaa > 1:627636/1‑251 (MQ=255) gTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGaa > 1:552261/1‑251 (MQ=255) ttattaTCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGAtctc < 1:637321/213‑1 (MQ=255) attatCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGac > 1:793778/1‑235 (MQ=255) attatCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTa > 1:168224/1‑251 (MQ=255) tCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAac < 1:694673/251‑1 (MQ=255) ccTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGtgatg < 1:718718/161‑1 (MQ=255) aCCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAAt < 1:118078/251‑1 (MQ=255) ccGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATc < 1:768191/251‑1 (MQ=255) ccGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATc < 1:691377/251‑1 (MQ=255) cGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATcc < 1:836811/251‑1 (MQ=255) tGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGc < 1:236553/250‑1 (MQ=255) cgcCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAAcc < 1:61543/251‑1 (MQ=255) cgcCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAAc > 1:511740/1‑250 (MQ=255) cgcCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAAc > 1:324750/1‑250 (MQ=255) cgcCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAAc > 1:831925/1‑250 (MQ=255) ccATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACAGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCaa > 1:79209/1‑251 (MQ=255) gACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCg < 1:401368/170‑1 (MQ=255) accaccATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCag < 1:594298/183‑1 (MQ=255) ccATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAgg < 1:873708/244‑1 (MQ=255) attattTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGac < 1:875411/183‑1 (MQ=255) attattTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGgtgt < 1:372796/236‑1 (MQ=255) attattTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAAtt < 1:679613/251‑1 (MQ=255) ttattTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAAttt < 1:711788/251‑1 (MQ=255) ttattTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATAGTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATc < 1:435450/215‑1 (MQ=255) cTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTTCGGTGGCATACGGCGCAACCCTCATTGTGGGGATGATGCTGGAGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAg > 1:265890/1‑233 (MQ=255) gTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCAATAAATCCTTCGGGCAAACCAAGGAGTTGCAGGATTTCAATTTATCTTTTCaaa > 1:276656/1‑251 (MQ=255) cacCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATg > 1:765567/1‑165 (MQ=255) cacCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAg < 1:107073/225‑1 (MQ=255) cacCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCa > 1:66268/1‑251 (MQ=255) aaGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGacagaac > 1:366910/1‑168 (MQ=255) cACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAAtt < 1:48794/250‑1 (MQ=255) cgTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTcaccac < 1:846315/250‑1 (MQ=255) gCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTg > 1:809040/1‑250 (MQ=255) cGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTgg < 1:783817/251‑1 (MQ=255) gTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATATGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGac > 1:293638/1‑145 (MQ=255) gTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTc < 1:379776/100‑1 (MQ=255) gTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAac > 1:496101/1‑165 (MQ=255) gTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATc < 1:866115/178‑1 (MQ=255) gTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGt > 1:39369/1‑251 (MQ=255) ttATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGc > 1:513000/1‑250 (MQ=255) atatTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCt > 1:55175/1‑250 (MQ=255) atTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAac > 1:403188/1‑158 (MQ=255) atTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAAcc < 1:636770/184‑1 (MQ=255) atTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCg > 1:786088/1‑251 (MQ=255) atTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCg > 1:773559/1‑251 (MQ=255) atTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCg > 1:897521/1‑251 (MQ=255) tttAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAg < 1:697806/194‑1 (MQ=255) tCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGc < 1:96998/251‑1 (MQ=255) gcgTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAac < 1:295524/148‑1 (MQ=255) gcgTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCaa > 1:864370/1‑251 (MQ=255) gcgTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCaa > 1:310802/1‑251 (MQ=255) cGATTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAacc > 1:101474/1‑242 (MQ=255) aTTACGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCAttt > 1:153571/1‑247 (MQ=255) aCGGACTTGCGGTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCAttt > 1:389795/1‑244 (MQ=255) gTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCATTTTGCGTCTGATTGCgggg > 1:105428/1‑250 (MQ=255) gTGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCATTTTGCGTCTGATTGCgggg > 1:270387/1‑250 (MQ=255) tGGCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCATTTTGCGTCTGATTGCGGGGc < 1:776767/250‑1 (MQ=255) ggCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTc < 1:851377/52‑1 (MQ=255) ggCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAAttt < 1:237092/78‑1 (MQ=255) ggCATACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCATTTTGCGTCTGATTGCGGGGCTa > 1:438919/1‑251 (MQ=255) tACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAATTTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCATTTTGCGTCTGATTGCGGGGCTagaag < 1:746446/251‑1 (MQ=255) tACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCATTTTGCGTCTGATTGCGGGGCTagaag < 1:268471/251‑1 (MQ=255) tACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCATTTTGCGTCTGATTGCGGGGCTagaag < 1:110424/251‑1 (MQ=255) tACGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCATTTTGCGTCTGATTGCGGGGCTagaag < 1:602476/251‑1 (MQ=255) cGGCGCAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATc > 1:574399/1‑124 (MQ=255) gcgcAACCCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCATTTTGCGTCTGATTGCGGGGCTAGAAGAGc > 1:537378/1‑250 (MQ=255) | TCCGACTTTGGATGAAGCGGGTTATACGCTAAAAGCGAGCAGTTTTCAGGTATTACGCTTTATTATTCTGCCTTTATCAAAACCGGCGTTATTATCCGCCTTGGTGACCGGTTTCGTGCGCGCCATGACCACCATCAGCGCCATTATTTTCTTAGTCACACCAAGCACCCGCGTTGCCACGTCTTATATTTTAAATCGCGTGGAAGACGGCGATTACGGACTTGCGGTGGCATACGGCGCAACTCTCATTGTGGTGATGATGCTGGTGATTGGATTATTCGGGCGCTGGGTCGGCGATCTCAATTTGCAGAGAAAACAACATGACAGAACAGATTGAATTAAAACACATCTATAAATCCTTCGGGCAAACCAAGGTGTTGCAGGATTTCAATTTATCTTTTCAAAAGCATAAATTCACCACTTTGCTTGGTGCCTCCGGCTGTGGCAAAACCACCATTTTGCGTCTGATTGCGGGGCTAGAAGAGC > 1/733506‑733991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |