Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 730,535 C→T intergenic (‑77/‑61) unknown ← / → unknown Type I restriction‑modification system, restriction subunit R (EC 3.1.21.3)/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1730,5350CT100.0% 175.8 / NA 66intergenic (‑77/‑61)unknown/unknownType I restriction‑modification system, restriction subunit R (EC 3.1.21.3)/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (34/32);  total (34/32)

CTTCAAAACTTTCATCGGTAATATCGCCTACCGCGTCTTGTTCTTCATTAGCGGCAAAAGAAAAGATAGTGGCAATTTTAAGCGGATTTTCTACCGCACTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTCCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATGAGGGATTGAATATGCAAAAATGGTTTAAACGCAGTTTAGGTTTGGTTTGTCTTT  >  1/730296‑730771
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                            
cTTCAAAACTTTCATCGGTAATATCGCCTACCGCGTCTTGTTCTTCATTAGCGGCAAAAGAAAAGATAGTGGCAATTTTAAGCGGATTTTCTACCGCACTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATgcg                                                                                                                                                                                                                                    >  1:600803/1‑250 (MQ=255)
                   aaTATCGCCTACCGCGTCTTGTTCTTCATTAGCGGCAAAAGAAAAGATAGTGGCAATTTTAAGCGGATTTTCTACCGCACTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATttcttc                                                                                                                                                                                                                                          >  1:487835/1‑225 (MQ=255)
                        cGCCTACCGCGTCTTGTTCTTCATTAGCGGCAAAAGAAAAGATAGTGGCAATTTTAAGCGGATTTTCTACCGCACTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATgc                                                                                                                                                                                                                                     >  1:16725/1‑225 (MQ=255)
                                  gTCTTGTTCTTCATTAGCGGCAAAAGAAAAGATAGTGGCAATTTTAAGCGGATTTTCTACCGCACTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATttcttc                                                                                                                                                                                                                                          <  1:282635/210‑1 (MQ=255)
                                  gTCTTGTTCTTCATTAGCGGCAAAAGAAAAGATAGTGGCAATTTTAAGCGGATTTTCTACCGCACTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTg                                                                                                                                                                                                 >  1:87481/1‑251 (MQ=255)
                                                          agaaaagaTAGTGGCAATTTTAAGCGGATTTTCTACCGCACTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAAAGCGCTTGGGc                                                                                                                                                                                                                             <  1:80533/199‑1 (MQ=255)
                                                                gaTAGTGGCAATTTTAAGCGGATTTTCTACCGCACTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCggg                                                                                                                                                                   >  1:645948/1‑250 (MQ=255)
                                                                         aaTTTTAAGCGGATTTTCTACCGCACTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTg                                                                                                                                                          <  1:332115/251‑1 (MQ=255)
                                                                                        ttCTACCGCACTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTtcatc                                                                                                                                           <  1:238323/251‑1 (MQ=255)
                                                                                          cTACCGCACTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAg                                                                                                                                         >  1:158307/1‑251 (MQ=255)
                                                                                                  cTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTtcatc                                                                                                                                           >  1:366665/1‑241 (MQ=255)
                                                                                                    ttgttgCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTtcatc                                                                                                                                           >  1:794540/1‑239 (MQ=255)
                                                                                                    ttgttgCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAAt                                                                                                                               >  1:636393/1‑251 (MQ=255)
                                                                                                      gttgCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTtcatc                                                                                                                                           <  1:322726/237‑1 (MQ=255)
                                                                                                          cTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACg                                                                                                                          <  1:457655/250‑1 (MQ=255)
                                                                                                           tttttAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGTCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTg                                                                                                                        >  1:496655/1‑251 (MQ=255)
                                                                                                             tttAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCgtg                                                                                                                                                                               >  1:715307/1‑194 (MQ=255)
                                                                                                                   tGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGatttattt                                                                                                                <  1:281089/251‑1 (MQ=255)
                                                                                                                   tGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGatttattt                                                                                                                <  1:768940/251‑1 (MQ=255)
                                                                                                                   tGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGatttattt                                                                                                                <  1:195800/251‑1 (MQ=255)
                                                                                                                        cATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTAt                                                                                                           <  1:631853/251‑1 (MQ=255)
                                                                                                                          taataaAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGAt                                                                                                                                                                <  1:701669/196‑1 (MQ=255)
                                                                                                                          taataaAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTAcc                                                                                                                                                      >  1:191103/1‑206 (MQ=255)
                                                                                                                          taataaAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTAttt                                                                                                         >  1:715168/1‑251 (MQ=255)
                                                                                                                          taataaAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAATTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTAttt                                                                                                         >  1:431094/1‑251 (MQ=255)
                                                                                                                            ataaAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTg                                                                                                       >  1:635501/1‑251 (MQ=255)
                                                                                                                                          ccTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACg                                                                                                                          <  1:14329/218‑1 (MQ=255)
                                                                                                                                          ccTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAAt                                                                                               <  1:656146/245‑1 (MQ=255)
                                                                                                                                           cTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCatat                                                                                        <  1:112430/251‑1 (MQ=255)
                                                                                                                                             ccACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACg                                                                                                                          <  1:12440/215‑1 (MQ=255)
                                                                                                                                             ccACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCAt                                                                                                    >  1:2091/1‑237 (MQ=255)
                                                                                                                                               acacTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAAt                                                                                     >  1:462877/1‑250 (MQ=255)
                                                                                                                                                cacTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATcc                                                                                   <  1:708639/251‑1 (MQ=255)
                                                                                                                                                 actactCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTG‑TTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTg                                                                                 <  1:882675/251‑1 (MQ=255)
                                                                                                                                                  ctactCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTAcc                                                                                                                                                      >  1:265405/1‑182 (MQ=255)
                                                                                                                                                  ctactCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATc                                                                                    >  1:844267/1‑248 (MQ=255)
                                                                                                                                                  ctactCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATc                                                                                    >  1:663182/1‑248 (MQ=255)
                                                                                                                                                    actCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTAcc                                                                                                                                                      <  1:10569/180‑1 (MQ=255)
                                                                                                                                                     ctCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGc                                                                              <  1:875470/251‑1 (MQ=255)
                                                                                                                                                     ctCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGc                                                                              <  1:184192/251‑1 (MQ=255)
                                                                                                                                                         ccGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGTTTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGcaat                                                                           >  1:832877/1‑250 (MQ=255)
                                                                                                                                                         ccGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATc                                                                                    >  1:557579/1‑241 (MQ=255)
                                                                                                                                                         ccGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGcaat                                                                           >  1:839848/1‑250 (MQ=255)
                                                                                                                                                            cAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGcaatcaat                                                                       <  1:30712/251‑1 (MQ=255)
                                                                                                                                                               aCATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAatgat                                                                    <  1:784351/251‑1 (MQ=255)
                                                                                                                                                                     cATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTaa                                                              <  1:334075/251‑1 (MQ=255)
                                                                                                                                                                         aaaGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTAt                                                                                                           <  1:531822/202‑1 (MQ=255)
                                                                                                                                                                           aGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATg                                                        >  1:840686/1‑251 (MQ=255)
                                                                                                                                                                                  aTTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATGAGGGAt                                                  <  1:238595/250‑1 (MQ=255)
                                                                                                                                                                                      ccGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATGAGGGATTGAat                                             <  1:586394/251‑1 (MQ=255)
                                                                                                                                                                                         gCGTTGAAACGATGTGTCTTTTGTTTGAAGTTTTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGCGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATGAGGGATTGAATATg                                          >  1:260033/1‑251 (MQ=255)
                                                                                                                                                                                         gCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCatat                                                                                        >  1:556372/1‑205 (MQ=255)
                                                                                                                                                                                           gTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATGAGGGATTGAATATGCa                                        >  1:776476/1‑251 (MQ=255)
                                                                                                                                                                                              gAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGatttattt                                                                                                                >  1:457896/1‑176 (MQ=255)
                                                                                                                                                                                                  cGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTaaaaa                                                                                                                                                                                                                     <  1:746663/71‑1 (MQ=255)
                                                                                                                                                                                                    aTGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATcc                                                                                   <  1:399290/199‑1 (MQ=255)
                                                                                                                                                                                                         tgaaagttttgAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATGAGGGATTGAATATGCAAAAATGGTTTAAAc                          <  1:594640/244‑1 (MQ=255)
                                                                                                                                                                                                               gtttgAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAAt                                                                                     <  1:560761/186‑1 (MQ=255)
                                                                                                                                                                                                               gtttgAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATcc                                                                                   >  1:714511/1‑188 (MQ=255)
                                                                                                                                                                                                               gtttgAAGTTGTTCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATGAGGGATTGAATATGCAAAAATGGTTTAAACGCAGtt                    >  1:129957/1‑251 (MQ=255)
                                                                                                                                                                                                                         gttCAAAATGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATGAGGGATTGAATATGCAAAAATGGTTTAAACGCAGTTTAggtttggt          >  1:255417/1‑251 (MQ=255)
                                                                                                                                                                                                                             aaaaTGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAAt                                                                                     >  1:821917/1‑172 (MQ=255)
                                                                                                                                                                                                                              aaaTGTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATGAGGGATTGAATATGCAAAAATGGTTTAAACGCAGTTTAGGTTTGGTTTGt      >  1:200119/1‑250 (MQ=255)
                                                                                                                                                                                                                                  gTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATTGCATATaa                                                                                      <  1:502068/166‑1 (MQ=255)
                                                                                                                                                                                                                                  gTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATcc                                                                                   >  1:775695/1‑169 (MQ=255)
                                                                                                                                                                                                                                  gTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATGAGGGATTGAATATGCAAAAATGGTTTAAACGc                        <  1:877373/228‑1 (MQ=255)
                                                                                                                                                                                                                                  gTATTGTGTGATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATGAGGGATTGAATATGCAAAAATGGTTTAAACGCAGTTTAGGTTTGGTTTGTCttt  >  1:509240/1‑250 (MQ=255)
                                                                                                                                                                                                                                       gtgtgATTTCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTAt                                                                                                           <  1:72218/140‑1 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                            
CTTCAAAACTTTCATCGGTAATATCGCCTACCGCGTCTTGTTCTTCATTAGCGGCAAAAGAAAAGATAGTGGCAATTTTAAGCGGATTTTCTACCGCACTTTGTTGCTTTTTAAATGCTTCATAATAAAACTTTGCCGCCTCCACACTACTCACCGCAAACATCGCATTAAAGCCTTGATTGCCGGCGTTGAAACGATGTGTCTTTTGTTTGAAGTTGTTCAAAATGTATTGTGTGATTCCTTCAATGCGCTTGGGCTGTAAAAAAGCCGCTTTTTGCTCAAGTGCGGTTAGTTTTTTCCGTGTTTTTAGCCGGTGATTGGTTGTACCTGTTTTTCATCAGCGCAAAAAATAAACGTGATTTATTTAGTATTTTGCATTCAATGGCATATAATCCTGAGCAATCAATGATGATTAATTTATGAGGGATTGAATATGCAAAAATGGTTTAAACGCAGTTTAGGTTTGGTTTGTCTTT  >  1/730296‑730771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑