| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 706,064 | T→G | T270T (ACT→ACG) | unknown → | Oligopeptide ABC transporter, substrate‑binding protein OppA (TC 3.A.1.5.1) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 706,064 | 0 | T | G | 100.0% | 153.7 / NA | 56 | T270T (ACT→ACG) | unknown | Oligopeptide ABC transporter, substrate‑binding protein OppA (TC 3.A.1.5.1) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (26/30); total (26/30) | |||||||||||
CGCAAATGCTGGCGCATATCAGCCTGTTGCCACAATATTTGTCGCCACATGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACTCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAA > 1/705820‑706306 | cGCAAATGCTGGCGCATATCAGCCTGTTGCCACAATATTTGTCGCCACATGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATAc < 1:880099/251‑1 (MQ=255)cGCAAATGCTGGCGCATATCAGCCTGTTGCCACAATATTTGTCGCCACATGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATAc < 1:148969/251‑1 (MQ=255) aTGCTGGCGCATATCAGCCTGTTGCCACAATATTTGTCGCCACATGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTcc > 1:3001/1‑250 (MQ=255) ggCGCATATCAGCCTGTTGCCACAATATTTGTCGCCACATGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCaa > 1:555490/1‑250 (MQ=255) gcgcATATCAGCCTGTTGCCACAATATTTGTCGCCACATGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCaa > 1:297967/1‑249 (MQ=255) tGTTGCCACAATATTTGTCGCCACATGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTAtttt > 1:180103/1‑251 (MQ=255) ccACAATATTTGTCGCCACATGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTacac < 1:126072/251‑1 (MQ=255) ccACAATATTTGTCGCCACATGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTacac < 1:504990/251‑1 (MQ=255) ccACAATATTTGTCGCCACATGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTacac < 1:376209/251‑1 (MQ=255) tttGTCGCCACATGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑tt < 1:465194/251‑1 (MQ=255) caTGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGc > 1:128386/1‑250 (MQ=255) aaGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAac < 1:521006/242‑1 (MQ=255) gtgACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCGACAAACGGATCAAACGCAATACTTCCCGCAAc > 1:441104/1‑202 (MQ=255) gtgACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCa > 1:774425/1‑251 (MQ=255) gACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCaaa > 1:86831/1‑251 (MQ=255) cAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGcc < 1:298802/251‑1 (MQ=255) cGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCgg < 1:274361/251‑1 (MQ=255) gggCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTg > 1:350222/1‑251 (MQ=255) gCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCg > 1:814864/1‑251 (MQ=255) gTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAAc < 1:247331/230‑1 (MQ=255) aTCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAg < 1:60465/251‑1 (MQ=255) gTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCAt > 1:377307/1‑250 (MQ=255) aTGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCCCCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGc < 1:664485/251‑1 (MQ=255) gggCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCaa < 1:255603/250‑1 (MQ=255) caAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAatgat < 1:818769/248‑1 (MQ=255) aGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACAt > 1:114124/1‑251 (MQ=255) gCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCACCAGGACGTCAGCGCCTTGGATGTGGTGTGGCAGCCGCAGCAGCAAACGGATCAAACGCAATTCTTCCCGCAACTTTGCCCCTATTTTTCCACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATc < 1:36646/250‑1 (MQ=255) aaTCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATc > 1:352721/1‑248 (MQ=255) aaaaGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGcc < 1:505049/250‑1 (MQ=255) gCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTaaaa > 1:603682/1‑251 (MQ=255) atatTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGgcg > 1:722977/1‑181 (MQ=255) atatTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGc < 1:807874/201‑1 (MQ=255) atatTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACa > 1:262026/1‑251 (MQ=255) atatTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACa > 1:471882/1‑251 (MQ=255) aaagaaaAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTacac < 1:316566/143‑1 (MQ=255) aaagaaaAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGAAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAAc < 1:698392/240‑1 (MQ=255) aaaaaGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCtt < 1:756156/246‑1 (MQ=255) aaaaaGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACg > 1:573532/1‑251 (MQ=255) aaaaGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACgg < 1:73822/251‑1 (MQ=255) tAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTAc < 1:540401/251‑1 (MQ=255) ggATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAacac > 1:702359/1‑132 (MQ=255) tCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGc < 1:617512/248‑1 (MQ=255) tCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCaaa > 1:240332/1‑251 (MQ=255) gAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTgg > 1:816620/1‑134 (MQ=255) cACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAg > 1:485218/1‑250 (MQ=255) cAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTg < 1:258607/251‑1 (MQ=255) cgcCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTATACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGc < 1:430469/248‑1 (MQ=255) gcCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGAc < 1:607706/228‑1 (MQ=255) tAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGc < 1:830672/110‑1 (MQ=255) aGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑tttt > 1:162242/1‑85 (MQ=255) aTGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAATTTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAAc < 1:885336/250‑1 (MQ=255) ccGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAg > 1:72654/1‑250 (MQ=255) gcaACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGCTGAACAattatt < 1:453115/237‑1 (MQ=255) gATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCa > 1:660466/1‑74 (MQ=255) gATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGaa > 1:375293/1‑251 (MQ=255) aTCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGc < 1:66010/230‑1 (MQ=255) | CGCAAATGCTGGCGCATATCAGCCTGTTGCCACAATATTTGTCGCCACATGAAGGCATTGTGACCAACGGGGCGTATCAAGTGATGGGGCAGCAAGGCAATCTCATCCATTTGGAAAAGAACCCGCAATATTGGGCGAAAGAAAAAGTGGCGTTTAAAAATGTGGATTATCAGAAAATCGCACTGCAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACTCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAA > 1/705820‑706306 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |