| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 596,785 | T→C | I52T (ATC→ACC) | unknown → | Chorismate synthase (EC 4.2.3.5) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 596,785 | 0 | T | C | 100.0% | 250.0 / NA | 91 | I52T (ATC→ACC) | unknown | Chorismate synthase (EC 4.2.3.5) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (50/41); total (50/41) | |||||||||||
ATGTGTTTATTAAAAATCAAGATACCGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCATCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGACATGCAGATTTTACTTATCAACAAAAATACGGCATTCGTGATTATCGCGGCGGCGGTCGTTCTTCCGCCCGCGAAA > 1/596548‑597021 | aTGTGTTTATTAAAAATCAAGATACCGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATAcc < 1:736006/251‑1 (MQ=255) tgtTTATTAAAAATCAAGATACCGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACcac < 1:416705/250‑1 (MQ=255) tgtTTATTAAAAATCAAGATACCGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACcac < 1:553944/250‑1 (MQ=255) tttATTAAAAATCAAGATACCGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac < 1:874050/250‑1 (MQ=255) tttATTAAAAATCAAGATACCGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac < 1:328153/250‑1 (MQ=255) tttATTAAAAATCAAGATACCGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac < 1:619662/250‑1 (MQ=255) tttATTAAAAATCAAGATACCGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac < 1:226426/250‑1 (MQ=255) aaTCAAGATACCGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACcac < 1:317902/239‑1 (MQ=255) tACCGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac > 1:689541/1‑233 (MQ=255) tACCGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATg > 1:116302/1‑251 (MQ=255) ccGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGaa > 1:642467/1‑251 (MQ=255) gTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac > 1:222908/1‑223 (MQ=255) gTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac > 1:461200/1‑223 (MQ=255) gTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac > 1:578171/1‑223 (MQ=255) cACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATcc < 1:71554/251‑1 (MQ=255) gATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATcc > 1:620175/1‑247 (MQ=255) gATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGgtg > 1:690227/1‑251 (MQ=255) gATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGgtg > 1:311106/1‑251 (MQ=255) gATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGgtg > 1:13510/1‑251 (MQ=255) aTTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGgtg < 1:268283/250‑1 (MQ=255) aTCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCGACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGaa > 1:240414/1‑251 (MQ=255) aTCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAg < 1:135056/221‑1 (MQ=255) tCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGaaa > 1:750002/1‑251 (MQ=255) cTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac > 1:629359/1‑198 (MQ=255) gCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACcac < 1:536836/189‑1 (MQ=255) cATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac < 1:155851/190‑1 (MQ=255) aaaGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATAc > 1:789774/1‑181 (MQ=255) gagaACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATAcc > 1:574819/1‑177 (MQ=255) agaACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTAt < 1:96436/250‑1 (MQ=255) cAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCa > 1:139930/1‑251 (MQ=255) gCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac > 1:498226/1‑174 (MQ=255) gCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATa > 1:28105/1‑251 (MQ=255) cATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCCCCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCa < 1:340031/248‑1 (MQ=255) cATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGATGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCAt < 1:413436/249‑1 (MQ=255) cATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCa < 1:669453/248‑1 (MQ=255) cATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCa < 1:474540/248‑1 (MQ=255) cATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCa < 1:74707/248‑1 (MQ=255) cATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCa < 1:858645/248‑1 (MQ=255) cATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATGGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCa < 1:433862/248‑1 (MQ=255) gCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAg < 1:745341/217‑1 (MQ=255) gCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGAATAATCAt > 1:654589/1‑251 (MQ=255) aaaTACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAg < 1:896166/250‑1 (MQ=255) aaTACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGaa < 1:16152/251‑1 (MQ=255) ccATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGaa < 1:456635/206‑1 (MQ=255) aTCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGa < 1:781329/251‑1 (MQ=255) cAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGa > 1:170842/1‑164 (MQ=255) cAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACg > 1:58650/1‑251 (MQ=255) cAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACg > 1:480838/1‑251 (MQ=255) cAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACg > 1:24001/1‑251 (MQ=255) ttattTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAg < 1:498303/234‑1 (MQ=255) cgTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACt < 1:312105/251‑1 (MQ=255) accaccTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCa > 1:807699/1‑211 (MQ=255) ccTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGaa > 1:118104/1‑251 (MQ=255) ccTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGaa > 1:634489/1‑251 (MQ=255) ccTTCAGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGaa > 1:886185/1‑251 (MQ=255) gCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTaaa > 1:736465/1‑251 (MQ=255) aGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGa < 1:777253/250‑1 (MQ=255) gTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATAc < 1:160861/117‑1 (MQ=255) tCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAAc > 1:123129/1‑220 (MQ=255) tCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGAt < 1:100857/249‑1 (MQ=255) tCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGAt < 1:760568/249‑1 (MQ=255) cccACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAg > 1:297019/1‑206 (MQ=255) gCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGAc > 1:859270/1‑224 (MQ=255) gCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTtccgt > 1:10065/1‑251 (MQ=255) gCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTAt < 1:87537/179‑1 (MQ=255) gCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAg > 1:83512/1‑195 (MQ=255) gCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCaa > 1:73330/1‑207 (MQ=255) gCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCggg > 1:745574/1‑251 (MQ=255) gCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCggg > 1:510795/1‑251 (MQ=255) gCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCggg > 1:556968/1‑251 (MQ=255) cTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGAc < 1:135748/251‑1 (MQ=255) gCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAAtt < 1:358498/221‑1 (MQ=255) aTTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac > 1:778984/1‑97 (MQ=255) gtgGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGACATGCAGATTTTa > 1:654420/1‑250 (MQ=255) gtgGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACAGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGACATGCAGATTTTa > 1:823017/1‑250 (MQ=255) tgGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGACATGCAGATTTTACt < 1:3303/251‑1 (MQ=255) gCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCa > 1:217276/1‑162 (MQ=255) gCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGACACGCAGATTTTACTTATcaa > 1:215652/1‑251 (MQ=255) gCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGAtt > 1:757704/1‑99 (MQ=255) gCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGACATGCAGATTTTACTTATCAACAAAAATACGGCATTCg > 1:802567/1‑251 (MQ=255) atTCAACCGGATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTa > 1:712007/1‑121 (MQ=255) ggATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGACATGCAGATTTTACTTATCAACAAAAATACGGCa < 1:872473/221‑1 (MQ=255) gATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCacac < 1:253223/43‑1 (MQ=255) gATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCa > 1:315284/1‑118 (MQ=255) gATTTGGATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGAc < 1:79423/187‑1 (MQ=255) ggATCGTCGTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGACATGCAGATTTTACTTATCAACAAAAATACGGCATTCGTGATTATCGCGGCGGCGGTCGTTCTTccgcc > 1:821196/1‑250 (MQ=255) tcgtcgTAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGACATGCAGATTTTACTTATCAACAAAAATACGGCATTCGTGATTATCGCGGCGGCGGTCGTTCTTCCGCCcgcg > 1:406410/1‑251 (MQ=255) gtcgtAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCgg < 1:592670/70‑1 (MQ=255) tcgtAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCAc < 1:549715/96‑1 (MQ=255) tcgtAAACCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGACATGCAGATTTTACTTATCAACAAAAATACGGCATTCGTGATTATCGCGGCGGCGGTCGTTCTTCCGCCCGCGaaa > 1:471860/1‑251 (MQ=255) aCCCGGCACCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGACATGCAGATTTTACTTATCAACAAAAATACGGCATTCGTGATTATcg > 1:559952/1‑216 (MQ=255) | ATGTGTTTATTAAAAATCAAGATACCGGTGCAGTCATGCCACTGATTGAAGTAAAATCTTAATTGCATTAAAGAGAGAACAGCATGGCAGGAAATACCATCGGACAATTATTTCGCGTCACCACCTTCGGCGAGTCCCACGGCATTGCCTTGGGTTGCATTGTGGACGGCGTACCGCCGAACATGGCATTATCGGAAGCGGATATTCAACCGGATTTGGATCGTCGTAAACCCGGCATCTCGCGCTATACCACACCGCGCCGCGAAGACGATGAAGTGCAGATTTTATCCGGTGTCTTTGAAGGAAAAACCACCGGCACCAGTATTGGCATAATCATTAAGAACGGCGATCAACGCTCGCAGGACTATGGCGAAATTAAAGATCGCTTCCGTCCGGGACATGCAGATTTTACTTATCAACAAAAATACGGCATTCGTGATTATCGCGGCGGCGGTCGTTCTTCCGCCCGCGAAA > 1/596548‑597021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |