Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 559,809 G→T S116R (AGC→AGA)  unknown ← UPF0319 protein YccT precursor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1559,8090GT100.0% 211.4 / NA 77S116R (AGC→AGA) unknownUPF0319 protein YccT precursor
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (40/37);  total (40/37)

ACATTCTCGCCTTGTAAGGTGACTTTGCCTTTTGCTACTTTACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACGCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTGGGTGTCATTAATATTGAAACTGCGGGCTTCCTTCAATAAGGATTTTGACGGTTTTTGAC  >  1/559570‑560050
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                 
aCATTCTCGCCTTGTAAGGTGACTTTGCCTTTTGCTACTTTACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCgg                                                                                                                                                                                                                                        >  1:256050/1‑251 (MQ=255)
   ttCTCGCCTTGTAAGGTGACTTTGCCTTTTGCTACTTTACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGc                                                                                                                                                                                                                                     <  1:431388/251‑1 (MQ=255)
                     aCTTTGCCTTTTGCTACTTTACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTCAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGTGGCCTTTTTAAAGGCATTGaa                                                                                                                                                                                                                   >  1:875012/1‑251 (MQ=255)
                      cTTTGCCTTTTGCTACTTTACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGaaa                                                                                                                                                                                                                  <  1:742374/251‑1 (MQ=255)
                      cTTTGCCTTTTGCTACTTTACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGaaa                                                                                                                                                                                                                  <  1:664633/251‑1 (MQ=255)
                       tttGCCTTTTGCTACTTTACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAAt                                                                                                                                                                                                                 <  1:892246/251‑1 (MQ=255)
                       tttGCCTTTTGCTACTTTACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAAt                                                                                                                                                                                                                 <  1:238297/251‑1 (MQ=255)
                             tttggctacttgacggggggCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCCGTTGAAGCGGGGGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTGTAAGTATTCTTGTTGGGTTTGTATGTGCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCt                                                                                                                                                                                                           <  1:675007/233‑1 (MQ=255)
                               ttGCTACTTTACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCg                                                                                                                                                                                                         >  1:243331/1‑251 (MQ=255)
                               ttGCTACTTTACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCg                                                                                                                                                                                                         >  1:244197/1‑251 (MQ=255)
                                     cTTTACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGAt                                                                                                                                                                                                   <  1:65834/251‑1 (MQ=255)
                                      tttACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATa                                                                                                                                                                                                  <  1:93968/251‑1 (MQ=255)
                                          ccTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAAttt                                                                                                                                                                                              <  1:747046/251‑1 (MQ=255)
                                                     cccaccGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGaaa                                                                                                                                                                                   <  1:581321/250‑1 (MQ=255)
                                                           ggCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAatgatga                                                                                                                                                                             >  1:592889/1‑251 (MQ=255)
                                                                ccACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCgg                                                                                                                                                                                                                                        <  1:545231/187‑1 (MQ=255)
                                                                ccACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGt                                                                                                                                                                          >  1:430782/1‑249 (MQ=255)
                                                                ccACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGt                                                                                                                                                                          >  1:767973/1‑249 (MQ=255)
                                                                     gTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCAcc                                                                                                                                                                                                                                          >  1:111539/1‑180 (MQ=255)
                                                                     gTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTgtgt                                                                                                                                                                   >  1:519028/1‑251 (MQ=255)
                                                                      tAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTgtgt                                                                                                                                                                   <  1:192162/250‑1 (MQ=255)
                                                                           gTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAAc                                                                                                                                                              <  1:670172/250‑1 (MQ=255)
                                                                                  tGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAg                                                                                                                                                      <  1:264846/251‑1 (MQ=255)
                                                                                       gTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTaaa                                                                                                                                                                                                                            <  1:840439/176‑1 (MQ=255)
                                                                                                  tGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGAt                                                                                                                                      <  1:784816/251‑1 (MQ=255)
                                                                                                                         cTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCg                                                                                                               <  1:121756/251‑1 (MQ=255)
                                                                                                                            cACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGaa                                                                                                            >  1:125374/1‑251 (MQ=255)
                                                                                                                              ccGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACt                                                                                                          <  1:301236/251‑1 (MQ=255)
                                                                                                                                    gCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGt                                                                                                                           >  1:276931/1‑228 (MQ=255)
                                                                                                                                      gTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTgcc                                                                                                                >  1:236004/1‑235 (MQ=255)
                                                                                                                                         gTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAatgatg                                                                                                                                                                              >  1:26202/1‑172 (MQ=255)
                                                                                                                                         gTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGCTGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATaa                                                                                               >  1:428221/1‑251 (MQ=255)
                                                                                                                                         gTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAAc                                                                                                                                                              <  1:768282/188‑1 (MQ=255)
                                                                                                                                         gTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAgg                                                                                                                       >  1:762155/1‑227 (MQ=255)
                                                                                                                                         gTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACt                                                                                                          >  1:593630/1‑240 (MQ=255)
                                                                                                                                              cGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGaaa                                                                                                                                                                                   >  1:842168/1‑162 (MQ=255)
                                                                                                                                                  tAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGAATTCTTGTTGGGATTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATa                                                                                      >  1:436321/1‑251 (MQ=255)
                                                                                                                                                     gTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAatgatga                                                                                                                                                                             >  1:443278/1‑161 (MQ=255)
                                                                                                                                                     gTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGt                                                                                                                                                    >  1:289242/1‑186 (MQ=255)
                                                                                                                                                     gTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGAt                                                                                                                                      >  1:888472/1‑200 (MQ=255)
                                                                                                                                                     gTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATAcg                                                                                    >  1:891441/1‑250 (MQ=255)
                                                                                                                                                     gTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATAcg                                                                                    >  1:757467/1‑250 (MQ=255)
                                                                                                                                                     gTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCC‑TTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGGTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATAcgcg                                                                                  >  1:654426/1‑251 (MQ=255)
                                                                                                                                                      tCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATc                                                                                                                                                                                                                >  1:610903/1‑125 (MQ=255)
                                                                                                                                                      tCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAgg                                                                                                                       >  1:153166/1‑214 (MQ=255)
                                                                                                                                                          tAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGt                                                                                                                                                    >  1:862942/1‑181 (MQ=255)
                                                                                                                                                            aTCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTAc                                                                            <  1:840163/251‑1 (MQ=255)
                                                                                                                                                            aTCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTAc                                                                            <  1:139026/251‑1 (MQ=255)
                                                                                                                                                                ggCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAg                                                                                                                                                      <  1:521856/173‑1 (MQ=255)
                                                                                                                                                                ggCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGa                                                                                                                                       <  1:300409/188‑1 (MQ=255)
                                                                                                                                                                ggCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCa                                                                          >  1:655668/1‑249 (MQ=255)
                                                                                                                                                                ggCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCa                                                                          >  1:409256/1‑249 (MQ=255)
                                                                                                                                                                ggCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCAc                                                                         >  1:644105/1‑250 (MQ=255)
                                                                                                                                                                 tcttaCGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGACATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCAc                                                                         <  1:551441/245‑1 (MQ=255)
                                                                                                                                                                 gCTAACGGTTGGGAAGAAGCCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCAc                                                                         <  1:2601/249‑1 (MQ=255)
                                                                                                                                                                 gCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCAc                                                                         <  1:644932/249‑1 (MQ=255)
                                                                                                                                                                        gTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCtt                                                                >  1:657126/1‑251 (MQ=255)
                                                                                                                                                                        gTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCtt                                                                >  1:268851/1‑251 (MQ=255)
                                                                                                                                                                        gTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTAGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAAc                                                                                                           <  1:277852/208‑1 (MQ=255)
                                                                                                                                                                            ggAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTg                                                             <  1:750932/250‑1 (MQ=255)
                                                                                                                                                                              aagaaACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTggg                                                           <  1:875469/250‑1 (MQ=255)
                                                                                                                                                                                    ccTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTGGGTGTCAtt                                                    >  1:690958/1‑251 (MQ=255)
                                                                                                                                                                                       tCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTGGGTGTCATTAat                                                 <  1:677172/251‑1 (MQ=255)
                                                                                                                                                                                           gTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTgtgt                                                                                                                                                                   <  1:425699/133‑1 (MQ=255)
                                                                                                                                                                                                 aGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTGGGTGTCATTAATATTGaaa                                          >  1:789668/1‑248 (MQ=255)
                                                                                                                                                                                                  gTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGc                                                                  <  1:762957/223‑1 (MQ=255)
                                                                                                                                                                                                     ttCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATa                                                                                                                                                                                                  <  1:652026/92‑1 (MQ=255)
                                                                                                                                                                                                       cTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTGGGTGTCATTAATATTGAAACTGCggg                                   >  1:99085/1‑249 (MQ=255)
                                                                                                                                                                                                             gggTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTg                                                                                                                                                                 >  1:54346/1‑117 (MQ=255)
                                                                                                                                                                                                               gTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGt                                                                                                                           >  1:803636/1‑153 (MQ=255)
                                                                                                                                                                                                               gTTTGTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTGGGTGTCATTAATATTGAAACTGCGGGCTTCCTTCaa                         >  1:369061/1‑251 (MQ=255)
                                                                                                                                                                                                                   gTATGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGc                                                                                                                                                                                                                                     <  1:704089/43‑1 (MQ=255)
                                                                                                                                                                                                                     aTGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTGGGTGTCATTAATATTGAAACTGCGGGCTTCCTTCAATAAGGa                   <  1:51515/251‑1 (MQ=255)
                                                                                                                                                                                                                      tGTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTGGGTGTCATTAATATTGAAACTGCGGGCTTCCTTCAATAAGGAt                  <  1:253790/251‑1 (MQ=255)
                                                                                                                                                                                                                       gTTCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTGGGTGTCATTAATATTGAAACTGCGGGCTTCCTTCAATAAGGAtt                 >  1:819401/1‑251 (MQ=255)
                                                                                                                                                                                                                        ttCGCGCCGGAAGCGGTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGACTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTGGGTGTCATTAATATTGAAACTGCGGGCTTCCTTCAATAAGGAttt                <  1:359308/251‑1 (MQ=255)
                                                                                                                                                                                                                                       gTTTTTACTCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTGGGTGTCATTAATATTGAAACTGCGGGCTTCCTTCAATAAGGATTTTGACGGTTTTTGAc  >  1:506612/1‑250 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                 
ACATTCTCGCCTTGTAAGGTGACTTTGCCTTTTGCTACTTTACCTGTGGCCGCACCACCGGCTACCACGGTAGTGGTCGGCGTGGCAGTTGAAGCGGTTGCAAAGGCAGGCACGGCGGCGGCTGCACCGGAAGCGTTGTATTCGCCTAAGTCTTTAATCAGGCTAACGGTTGGGAAGAAACCTTCCTGTTTTAAGTATTCTTGTTGGGTTTGTATGTTCGCGCCGGAAGCGGTTTTTACGCTGATCACCGGGGCCTTTTTAAAGGCATTGAAATCACGCTCGTTAGATAATTTCGGGGCGGAAATGATGATGTCTTGTGTTGAACCTTGGAAGGTAACGACAATTGGATCGGTTTCAAGTAAGGCGCTGTCGGAACTGGTTTTTATAATCTCGGATACGCGCACTACCACTTGGTGCTTTTGGGTGTCATTAATATTGAAACTGCGGGCTTCCTTCAATAAGGATTTTGACGGTTTTTGAC  >  1/559570‑560050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑