| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 553,108 | T→C | H68Y (CAT→TAC) | unknown → | Transketolase, N‑terminal section (EC 2.2.1.1) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 553,108 | 0 | T | C | 100.0% | 211.1 / NA | 75 | H68Y (CAT→TAC) | unknown | Transketolase, N‑terminal section (EC 2.2.1.1) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (32/43); total (32/43) | |||||||||||
ACATTGCGAAAAAAACAACAGAGCAAAAATAGGTGAATAAGATGGATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGCATGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCGCACTTTTTGTATTGTGGGCGACGGCGAAC > 1/552864‑553349 | aCATTGCGAAAAAAACAACAGAGCAAAAATAGGTGAATAAGATGGATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGc < 1:741552/251‑1 (MQ=255) aaaCAACAGAGCAAAAATAGGTGAATAAGATGGATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTAt < 1:563712/251‑1 (MQ=255) aaaCAACAGAGCAAAAATAGGTGAATAAGATGGATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTAt < 1:623655/251‑1 (MQ=255) aaaCAACAGAGCAAAAATAGGTGAATAAGATGGATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTAt > 1:340492/1‑251 (MQ=255) caacaGAGCAAAAATAGGTGAATAAGATGGATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGcc < 1:319457/251‑1 (MQ=255) agCAAAAATAGGTGAATAAGATGGATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCActc < 1:615073/249‑1 (MQ=255) aaaaTAGGTGAATAAGATGGATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCt < 1:339203/251‑1 (MQ=255) aGGTGAATAAGATGGATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGcc < 1:443029/236‑1 (MQ=255) gATGGATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTAtttt > 1:760472/1‑250 (MQ=255) aTGGATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTc < 1:833705/250‑1 (MQ=255) ggATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCct > 1:703483/1‑250 (MQ=255) ctacAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGcc < 1:211920/209‑1 (MQ=255) ctacAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCAc < 1:870911/220‑1 (MQ=255) ctacAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAg > 1:894762/1‑251 (MQ=255) ctacAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAg > 1:385435/1‑251 (MQ=255) aaCGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTAcc < 1:176702/251‑1 (MQ=255) tCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGcc < 1:498098/184‑1 (MQ=255) aaCACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGcc < 1:291230/251‑1 (MQ=255) cacaTTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCaa > 1:103497/1‑251 (MQ=255) caTTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGTCAc > 1:182929/1‑178 (MQ=255) caTTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTAcc > 1:708353/1‑221 (MQ=255) aTTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTc < 1:359574/251‑1 (MQ=255) tGCATTTAGTCTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGttt < 1:710195/250‑1 (MQ=255) gCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCg < 1:901186/191‑1 (MQ=255) gCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGa > 1:684760/1‑251 (MQ=255) cTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCg > 1:872545/1‑197 (MQ=255) ccTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGcc < 1:599217/130‑1 (MQ=255) ccTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAg < 1:148646/248‑1 (MQ=255) ccTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGtt < 1:780057/251‑1 (MQ=255) ccTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGtt < 1:880178/251‑1 (MQ=255) cGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCgggc < 1:154500/251‑1 (MQ=255) cGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCggg > 1:8036/1‑250 (MQ=255) gTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGCCCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCgggca > 1:673461/1‑251 (MQ=255) aaCCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCgggcagggca < 1:30887/251‑1 (MQ=255) cccTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGTGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGtt < 1:454988/234‑1 (MQ=255) cccTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTATTTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCAc > 1:742054/1‑116 (MQ=255) ttGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGtt < 1:178961/231‑1 (MQ=255) gtgtTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAAt < 1:206203/156‑1 (MQ=255) gtgtTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTg > 1:565955/1‑250 (MQ=255) gtTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGcc > 1:93774/1‑174 (MQ=255) gtTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCgg > 1:257807/1‑251 (MQ=255) ttATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTAt < 1:559516/99‑1 (MQ=255) ttATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCgg < 1:801922/250‑1 (MQ=255) aCGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTc > 1:671516/1‑151 (MQ=255) cGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCggcaggca > 1:603896/1‑251 (MQ=255) aGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGc > 1:547907/1‑250 (MQ=255) ggTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGAc > 1:852148/1‑199 (MQ=255) ggTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGc > 1:533136/1‑249 (MQ=255) tGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTcc < 1:384279/251‑1 (MQ=255) tGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTcc < 1:717050/251‑1 (MQ=255) ccTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCAt > 1:415560/1‑250 (MQ=255) aaCCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTa > 1:168466/1‑251 (MQ=255) ccTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATc < 1:255456/244‑1 (MQ=255) ccTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTAcg < 1:775823/251‑1 (MQ=255) cTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTAcgc < 1:31097/251‑1 (MQ=255) gAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTc > 1:262755/1‑97 (MQ=255) aaGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCgg < 1:846853/250‑1 (MQ=255) cATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGaa > 1:277474/1‑251 (MQ=255) cATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGa < 1:669111/250‑1 (MQ=255) cATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGa < 1:311731/250‑1 (MQ=255) tGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCTTTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGcc < 1:201415/245‑1 (MQ=255) tGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCg < 1:658659/251‑1 (MQ=255) ggCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAAc < 1:741687/248‑1 (MQ=255) cgcgATTA‑TTTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCGCACTTTTTg < 1:30446/251‑1 (MQ=255) atta‑ttTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCGCACTTTTTGTAtt > 1:351160/1‑251 (MQ=255) atta‑ttTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCGCACTTTTTGTAt < 1:718505/250‑1 (MQ=255) atta‑ttTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCGCACTTTTTGTAt < 1:203721/250‑1 (MQ=255) tta‑ttTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCGCACTTTTTGTATtg < 1:284856/251‑1 (MQ=255) a‑ttTTGTGTTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCGCACTTTTTGTATtgtg > 1:488024/1‑251 (MQ=255) gtgtTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAAc > 1:810719/1‑228 (MQ=255) gtgtTATCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCGCACTTTTTGTAt > 1:1019/1‑242 (MQ=255) tCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTcc > 1:385348/1‑198 (MQ=255) tCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCGCACTTTTTGTATTGTGGGCGAc > 1:59401/1‑246 (MQ=255) tCCAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCGCACTTTTTGTATTGTGGGCGACGGCGa > 1:204360/1‑251 (MQ=255) cAAAGGGTACGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCGCACTTTTTGTATTGTGGGCGACGGCGAAc < 1:506266/251‑1 (MQ=255) | ACATTGCGAAAAAAACAACAGAGCAAAAATAGGTGAATAAGATGGATACTACAGAACTTCAACGGTTTGCTCAGAAAATTCGTCTTAACACATTAAAATCGCTGGTGCATTTAGACTTTGGTCACTTCGGTGGCAGCCTTTCTATCGTAGAAACCCTTGCCGTGTTATACGGCAAGGTGATGCGCCTCAAACCTGAAGATCCGCATTGGCAGGAACGCGATTA‑TTTTGTGTTATCCAAAGGGCATGCAGGCCCCGCCCTGTATGCCACTCTCGCCTTAAAAGGCTATTTTCCTCTCGAGCAACTTTTTACCTTAAATTCCGACCGCACTTTTTTGCCAAGTCACCCCGACCGTTTGAAAACCCCCGGCGTGGACGCCACAACAGGTTCGCTCGGGCAGGGCATTTCCATTGCGGCAGGCATCGCCTTGTCCCATCAATTACGCGGTATGCCGAACCGCACTTTTTGTATTGTGGGCGACGGCGAAC > 1/552864‑553349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |