| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 549,174 | A→G | T542A (ACG→GCG) | unknown → | Bis‑ABC ATPase Uup |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 549,174 | 0 | A | G | 100.0% | 157.0 / NA | 58 | T542A (ACG→GCG) | unknown | Bis‑ABC ATPase Uup |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (26/32); total (26/32) | |||||||||||
TCATTCTGGATGAGCCGACTAATGACTTGGACGTAGAAACCTTGGAATTGTTGGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCACGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAATTTTTTCCAACAATCCCACGACATCACTGATGCCAAATTGAAAGCGCTGGCAGACAC > 1/548935‑549418 | tCATTCTGGATGAGCCGACTAATGACTTGGACGTAGAAACCTTGGAATTGTTGGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTtaaaaat < 1:473201/251‑1 (MQ=255)tCATTCTGGATGAGCCGACTAATGACTTGGACGTAGAAACCTTGGAATTGTTGGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTtaaaaat < 1:277254/251‑1 (MQ=255) ttCTGGATGAGCCGACTAATGACTTGGACGTAGAAACCTTGGAATTGTTGGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTtaaaaataaa > 1:67378/1‑251 (MQ=255) ggATGAGCCGACTAATGACTTGGACGTAGAAACCTTGGAATTGTTGGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATaaaaaaa > 1:12771/1‑251 (MQ=255) ggATGAGCCGACTAATGACTTGGACGTAGAAACCTTGGAATTGTTGGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATaaaaaaa > 1:242825/1‑251 (MQ=255) aCTAATGACTTGGACGTAGAAACCTTGGAATTGTTGGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGaa > 1:881191/1‑251 (MQ=255) gACTTGGACGTAGAAACCTTGGAATTGTTGGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAaaga > 1:49837/1‑251 (MQ=255) gACTTGGACGTAGAAACCTTGGAATTGTTGGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAaaga > 1:459184/1‑251 (MQ=255) tAGAAACCTTGGAATTGTTGGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGc < 1:507387/250‑1 (MQ=255) ttgttgGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTGAATTGATTGATAATACCTCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATaaaaa < 1:390027/251‑1 (MQ=255) ttgGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACg < 1:661776/250‑1 (MQ=255) ttgGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACg < 1:62658/250‑1 (MQ=255) ttgGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACg < 1:456649/250‑1 (MQ=255) gATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGaaaa > 1:875536/1‑250 (MQ=255) tATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGt > 1:17412/1‑251 (MQ=255) ttGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCta > 1:111445/1‑251 (MQ=255) tGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCtat > 1:25522/1‑251 (MQ=255) cTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATaa < 1:361383/251‑1 (MQ=255) cGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGTAAACCGTCAAACTTTCCTATAAAGaa > 1:259535/1‑250 (MQ=255) cGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGaac < 1:4624/251‑1 (MQ=255) cGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAAt > 1:859961/1‑251 (MQ=255) aTCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAAc < 1:867869/225‑1 (MQ=255) aTCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATaa < 1:125060/235‑1 (MQ=255) aTCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATaa < 1:138750/235‑1 (MQ=255) tCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGaa > 1:764151/1‑250 (MQ=255) tCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAAc < 1:28765/251‑1 (MQ=255) aTTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAgaagaa < 1:689825/165‑1 (MQ=255) gATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCa > 1:649721/1‑251 (MQ=255) aCCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGa < 1:692875/251‑1 (MQ=255) aaTGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGAttt < 1:804668/250‑1 (MQ=255) tGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAAc > 1:52190/1‑223 (MQ=255) tGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTaga < 1:181910/251‑1 (MQ=255) cTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTagaag < 1:546089/251‑1 (MQ=255) tCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGaaaaa > 1:744257/1‑251 (MQ=255) tttGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATaaaaa > 1:550376/1‑155 (MQ=255) cAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCAc < 1:388167/251‑1 (MQ=255) cAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCAc < 1:185545/251‑1 (MQ=255) cGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTc < 1:611617/251‑1 (MQ=255) gAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAAc > 1:406171/1‑164 (MQ=255) gAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAAc < 1:221806/164‑1 (MQ=255) gAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGaaa > 1:326596/1‑251 (MQ=255) gAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGaaa > 1:673731/1‑251 (MQ=255) ggcTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAAttt > 1:795125/1‑251 (MQ=255) cttcGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAAc > 1:687888/1‑173 (MQ=255) ccAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAATTTTTTCCAACAATcc < 1:514543/251‑1 (MQ=255) aaaCAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAATTTTTTCcaac < 1:239304/244‑1 (MQ=255) aaaCAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAATTTTTTCCAACAATCCCa > 1:93346/1‑251 (MQ=255) aaaCAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAATTTTTTCCAACAATCCCa > 1:599180/1‑251 (MQ=255) cagcagCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAAc < 1:123996/130‑1 (MQ=255) cagcaAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAATTTTTTCCAACAATCCCACGa < 1:547702/248‑1 (MQ=255) cagcaAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAATTTTTTCCAACAATCCCACGAc < 1:661881/249‑1 (MQ=255) caAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAATTTTTTCCAACAATCCCACGACATCAc < 1:650882/251‑1 (MQ=255) attTTGCACAAAAAGCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGc > 1:577785/1‑159 (MQ=255) gCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTgg < 1:115575/61‑1 (MQ=255) gCCGAACAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAATTTTTTCCAACAATCCCACGACATCACTg > 1:83040/1‑229 (MQ=255) aaCAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAAttt < 1:332747/199‑1 (MQ=255) cAAGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAATTTTTTCCAACAATCCCACGACATCACTGATGCCAAATTGAAAGCGCTGGCAGacac < 1:723030/251‑1 (MQ=255) aGGCGCGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAATTTTTTCCAACAATCCCACGACATCACTGATGCCAAATTGAAAg < 1:695443/236‑1 (MQ=255) | TCATTCTGGATGAGCCGACTAATGACTTGGACGTAGAAACCTTGGAATTGTTGGAAGAAATTCTCACGGATTATCAAGGCACCTTGCTTATCGTCAGTCACGATCGTCAATTTATTGATAATACCGCCACCGAATGCTACATCTTTGAAGGCAACGGCGTGCTGAATAAATACGTCGGCGGCTTCTTCGACGCCAAACAGCAGCAAGCCAATTATTTTGCACAAAAAGCCGAACAAGGCACGGTTAAAAATAAAAAAATCGAGCCGAAAAAAGAAGAAAGTGCGGTGGAAAATAAAAACGTTTCCAACAAACCGAAAACCGTCAAACTTTCCTATAAAGAACAACGCGAATTGGAACAGCTGCCGCAATTGCTGGAAGATTTAGAAGAAAAAATCACCGCACTTCAAAGCGAAATCGCCGACCCGAATTTTTTCCAACAATCCCACGACATCACTGATGCCAAATTGAAAGCGCTGGCAGACAC > 1/548935‑549418 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |