Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 534,395 A→G intergenic (‑145/‑196) unknown ← / → unknown Cytochrome c551 peroxidase (EC 1.11.1.5)/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1534,3950AG100.0% 27.5 / NA 12intergenic (‑145/‑196)unknown/unknownCytochrome c551 peroxidase (EC 1.11.1.5)/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (7/5);  total (7/5)

CATTTGTCCTTTATCATACTGATGAACGTACCCTACAACTCCTAAATAGCCAACAATAGCGACAACCGCCGTTTTCAGTGCAAATTTTTTCATAATTGTCCTCCAACACTTAAAAGTAAAAACGAAGAAGGGATTATCGGTTAAATATAAGAGGAAACATATGATTTAAATCAATAAATTCAATTTGAAAAAACAATGGATGAAATAGATTTTAGTAATTAAATATCTATTTAGAGCATTCACTATAAATATATTTTTATATGAGAGTATCTGTTTTTTAGGTTGATTTGCAAATTTTAAAAAATTTTTTGTAAGAAAATGGAAATGTCTCCGTCTAACATTATGTGTGTGGGAGTTTATTATGACTTTTTCACTTCGTGCTTATTCAAGCAAAATATTTTTACATTTAATACTATTATTTAAGGAGTTTATCATGAAAAAAATTAATTTATTAACCGGCGTACTTGCTCTTACTA  >  1/534158‑534633
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                              
aaagagacatttATCATACTGATGAACGTACCCTACAACTCCTAAATAGCCAACAATAGCGACAACCGCCGTTTTCAGTGCAAATTTTTTCATAATTGTCCTCCAACACTTAAAAGTAAAAACGAAGAAGGGATTATCGGTTAAATATAAGAGGAAACATATGATTTAAATCAATAAATTCAATTTGAAAAAACAATGGATGAAATAGATTTTAGTAATTAAATATCTATTTAGAGCGTTCACTATAAata                                                                                                                                                                                                                                   <  1:65875/242‑1 (MQ=255)
     gTCCTTTATCATACTGATGAACGTACCCTACAACTCCTAAATAGCCAACAATAGCGACAACCGCCGTTTTCAGTGCAAATTTTTTCATAATTGTCCTCCAACACTTAAAAGTAAAAACGAAGAAGGGATTATCGGTTAAATATAAGAGGAAACATATGATTTAAATCAATAAATTCAATTTGAAAAAACAATGGATGAAATAGATTTTAGTAATTAAATATCTATTTAGAGCGTTCACTATAAATATAttt                                                                                                                                                                                                                              >  1:595476/1‑251 (MQ=255)
          ttATCATACTGATGAACGTACCCTACAACTCCTAAATAGCCAACAATAGCGACAACCGCCGTTTTCAGTGCAAATTTTTTCATAATTGTCCTCCAACACTTAAAAGTAAAAACGAAGAAGGGATTATCGGTTAAATATAAGAGGAAACATATGATTTAAATCAATAAATTCAATTTGAAAAAACAATGGATGAAATAGATTTTAGTAATTAAATATCTATTTAGAGCGTTCACTATAAATATATTTTtata                                                                                                                                                                                                                         >  1:602132/1‑251 (MQ=255)
               aTACTGATGAACGTACCCTACAACTCCTAAATAGCCAACAATAGCGACAACCGCCGTTTTCAGTGCAAATTTTTTCATAATTGTCCTCCAACACTTAAAAGTAAAAACGAAGAAGGGATTATCGGTTAAATATAAGAGGAAACATATGATTTAAATCAATAAATTCAATTTGAAAAAACAATGGATGAAATAGATTTTAGTAATTAAATATCTATTTAGAGCGTTCACTATAAATATATTTTTATATgaga                                                                                                                                                                                                                    >  1:234603/1‑251 (MQ=255)
                        aaCGTCCCCTACAACTCCTAAATAGCCAAAAATAGCGACAACCGCCGTTTTCAGTGCAAATTTTTTCATAATTGTCCTCCAACACTTAAAAGTAAAAACGAAGAAGGGATTATCGGTTAAATATAAGAGGAAACATATGATTTAAATCAATAAATTCAATTTGAAAAAACAATGGATGAAATAGATTTTAGTAATTAAATATCTATTTAGAGCGTTCACTATAAata                                                                                                                                                                                                                                   <  1:718123/227‑1 (MQ=255)
                                      cTCCTAAATAGCCAACAATAGCGACAACCACCGTTTTCAGTGCAAATTTTTTCATAATTGTCCTCCAACACTTAAAAGTAAAAACGAAGAAGGGATTATCGGTTAAATATAAGAGGAAACATATGATTTAAATCAATAAATTCAATTTGAAAAAACAATGGATGAAATAGATTTTAGTAATTAAATATCTATTTAGAGCGTTCACTATAAATATATTTTTATATGAGAGTATCTGTTTTTTAGGTTGAttt                                                                                                                                                                                             >  1:220556/1‑251 (MQ=255)
                                                  caacaaTAGCGACAACCGCCGTTTTCAGTGCAAATTTTTTCATAATTGTCCTCCAACACTTAAAAGTAAAAACGAAGAAGGGATTATCGGTTAAATATAAGAGGAAACATATGATTTAAATCAATAAATTCAATTTGAAAAAACAATGGATGAAATAGATTTTAGTAATTAAATATCTATTTAGAGCGTTCACTATAAATATATTTTTATATGAGAGTATCTGTTTTTTAGGTTGATTTGCAAATTTTaaa                                                                                                                                                                                 >  1:573517/1‑251 (MQ=255)
                                                             aCAACCGCCGTTTTCAGTGCAAATTTTTTCATAATTGTCCTCCAACACTTAAAAGTAAAAACGAAGAAGGGATTATCGGTTAAATATAAGAGGAAACATATGATTTAAATCAATAAATTCAATTTGAAAAAACAATGGATGAAATAGATTTTAGTAATTAAATATCTATTTAGAGCGTTCACTATAAata                                                                                                                                                                                                                                   >  1:611379/1‑190 (MQ=255)
                                                                                     tttttCATAATTGTCCTCCAACACTTAAAAGTAAAAACGAAGAAGGGATTATCGGTTAAATATAAGAGGAAACATATGATTTAAATCAATAAATTCAATTTGAAAAAACAATGGATGAAATAGATTTTAGTAATTAAATATCTATTTAGAGCGTTCACTATAAATATATTTTTATATGAGAGTATCTGTTTTTTAGGTTGATTTGCAAATTTTAAAAAATTTTTTGTAAGAAAATGGAAATGTCTCCGTCt                                                                                                                                              <  1:74917/251‑1 (MQ=255)
                                                                                                                                                                                                                                 tCTATTTAGAGCGTTCACTATAAATATATTTTTATATGAGAGTATCTGTTTTTTAGGTTGATTTGCAAATTTTAAAAAATTTTTTGTAAGAAAATGGAAATg                                                                                                                                                       >  1:82592/1‑102 (MQ=255)
                                                                                                                                                                                                                                   tATTTAGAGCGTTCACTATAAATATATTTTTATATGAGAGTATCTGTTTTTTAGGTTGATTTGCAAATTTTAAAAAATTTTTTGTAAGAAAATGGAAATGTCTCCGTCTAACATTATGTGTGTggg                                                                                                                             <  1:592286/126‑1 (MQ=255)
                                                                                                                                                                                                                                   tATTTAGAGCGTTCACTATAAATATATTTTTATATGAGAGTATCTGTTTTTTAGGTTGATTTGCAAATTTTAAAAAATTTTTTGTAAGAAAATGGAAATGTCTCCGTCTAACATTATGTGTGTGGGAGTTTATTATGACTTTTTCACTTCGTGCTTATTCAAGCAAAATATTTTTACATTTAATACTATTATTTAAGGAGTTTATCATGAAAAAAATTAATTTATTAACCGGCGTACTTGCTCTTACTa  <  1:348316/249‑1 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                              
CATTTGTCCTTTATCATACTGATGAACGTACCCTACAACTCCTAAATAGCCAACAATAGCGACAACCGCCGTTTTCAGTGCAAATTTTTTCATAATTGTCCTCCAACACTTAAAAGTAAAAACGAAGAAGGGATTATCGGTTAAATATAAGAGGAAACATATGATTTAAATCAATAAATTCAATTTGAAAAAACAATGGATGAAATAGATTTTAGTAATTAAATATCTATTTAGAGCATTCACTATAAATATATTTTTATATGAGAGTATCTGTTTTTTAGGTTGATTTGCAAATTTTAAAAAATTTTTTGTAAGAAAATGGAAATGTCTCCGTCTAACATTATGTGTGTGGGAGTTTATTATGACTTTTTCACTTCGTGCTTATTCAAGCAAAATATTTTTACATTTAATACTATTATTTAAGGAGTTTATCATGAAAAAAATTAATTTATTAACCGGCGTACTTGCTCTTACTA  >  1/534158‑534633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑