| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 460,337 | G→T | P21Q (CCG→CAG) | unknown ← | Hydrogenase‑4 maturation protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 460,337 | 0 | G | T | 95.6% | 173.8 / ‑4.0 | 68 | P21Q (CCG→CAG) | unknown | Hydrogenase‑4 maturation protease |
| Reads supporting (aligned to +/- strand): ref base G (1/2); new base T (29/36); total (30/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAATGGGCTTTATTTTCGTCCAGCGCTTTCGCCAATAAATTCACATGACTGGAATCAATCACGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCGGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCTG‑TGCCCGCCCATTATCCAAACGTAAATTCGGGCGGGC‑ACAGGACCCGCCCCTACGGGAGAATGTAAGCCAATAACTTACCCCGAAAACGGCATACTAATGG > 1/460097‑460558 | aaaTGGGCTTTATTTTCGTCCAGCGCTTTCGCCAATAAATTCACATGACTGGAATCAATCACGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGttc < 1:776798/251‑1 (MQ=255) gggCTTTATTTTCGTCCAGCGCTTTCGCCAATAAATTCACATGACTGGAATCAATCACGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCg > 1:485379/1‑251 (MQ=255) gcTTTCGCCAATAAATTCACATGACTGGAATCAATCACGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGcgttcgtt > 1:249557/1‑251 (MQ=255) cTTTCGCCAATAAATTCACATGACTGGAATCAATCACGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTg < 1:896715/251‑1 (MQ=255) cacaTGACTGGAATCAATCACGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTa > 1:333394/1‑251 (MQ=255) aTGACTGGAATCAATCACGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACgg < 1:476386/251‑1 (MQ=255) aTGACTGGAATCAATCACGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACgg < 1:730738/251‑1 (MQ=255) aCTGGAATCAATCACGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACggtgg > 1:27547/1‑251 (MQ=255) ggagtcgatcaCGATTTCGCCGAATTTCATTAACCCTGCAAATTTACGCTTTGCCTCCCCCTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACCCCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGTTCCGGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCa > 1:67599/8‑251 (MQ=255) gAATCAATCACGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCAc < 1:297550/194‑1 (MQ=255) tcaatcaCGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGAt < 1:421132/251‑1 (MQ=255) caatcaCGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATa < 1:878666/251‑1 (MQ=255) caatcaCGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATa < 1:893594/251‑1 (MQ=255) aatcaCGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATa > 1:790827/1‑250 (MQ=255) atcaCGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATg < 1:565989/246‑1 (MQ=255) tttCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTAc < 1:25398/251‑1 (MQ=255) tttCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTAc < 1:335917/251‑1 (MQ=255) cGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGc < 1:657230/251‑1 (MQ=255) aaTTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTAc < 1:397482/251‑1 (MQ=255) ttCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATc < 1:88375/251‑1 (MQ=255) tCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGagaag < 1:324278/205‑1 (MQ=255) tCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGAt > 1:747891/1‑229 (MQ=255) tCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTc > 1:771524/1‑234 (MQ=255) cATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTa > 1:278933/1‑251 (MQ=255) cATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTa > 1:669668/1‑251 (MQ=255) tAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGc < 1:886865/251‑1 (MQ=255) aCCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACgg > 1:663464/1‑213 (MQ=255) cccTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACg > 1:41433/1‑211 (MQ=255) cccTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCaaa > 1:396323/1‑250 (MQ=255) cccTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCaa > 1:711538/1‑250 (MQ=255) cTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACag > 1:503856/1‑251 (MQ=255) gtagaTTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACagag > 1:158218/5‑251 (MQ=255) aaTTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACAt < 1:752152/235‑1 (MQ=255) cTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGc > 1:508988/1‑233 (MQ=255) tttGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAg < 1:474127/251‑1 (MQ=255) ttGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGc < 1:201036/218‑1 (MQ=255) tCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTAc < 1:777993/204‑1 (MQ=255) cGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCtg‑tg < 1:361862/251‑1 (MQ=255) gACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCAc > 1:365857/1‑120 (MQ=255) aCAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCTG‑TGCCCGCCCATTATc < 1:143269/251‑1 (MQ=255) aaTTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGCTcccttgcccccccctttttca > 1:862138/1‑231 (MQ=255) ttgttgATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGc < 1:686028/187‑1 (MQ=255) gttgATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCTG‑TGCCCGCCCATTATcc < 1:482715/245‑1 (MQ=255) gttgATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGGCCTT‑Tgcccccccccttttcaaacaa > 1:399031/1‑238 (MQ=255) tCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCTG‑Tgcccgcc < 1:757883/229‑1 (MQ=255) tCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCTG‑TGCCCGCCCATTATc < 1:361607/236‑1 (MQ=255) tCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCTG‑TGCCCGCCCATTATCCaaa < 1:679448/240‑1 (MQ=255) ccTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCTG‑Tgcccgcccgaatttacgtttggataatggg < 1:633978/251‑23 (MQ=255) aaGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTgaga < 1:254011/108‑1 (MQ=255) atcaatcaCACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTc < 1:532553/134‑1 (MQ=255) caatcaCACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGGCCCGTTGCCC‑CCCCTTATCCAAACCTAAAATCAGGCGGGG‑CCAGGACCCGccccccccgggggaagtaaaa > 1:799218/1‑234 (MQ=255) aaccacaCCCACGTGGGGACCTATTGCAAAAGAGTAATACATTCCTTGCTGCGCCTGCTCTGGCACTTTTTCTTC‑TTTTCGAAAAAAGCTTTTGTAAAGAAAAAAGAATATGAGGGTGGTAATGATCCGCCCTCATGGCTTTACATCAAAGCAAGAGATTTGTTTTGGGGGGGGGGGGTCCTG‑TCCCCCCCCATTACCAAAACGAAATTTCGGG‑GGGCAACAGGCCCCGCCCCTACGGGAGAATGTAAGcc < 1:876055/248‑1 (MQ=255) atcaCACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCCG‑Tgcccgcc > 1:28545/1‑190 (MQ=255) atcaCACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGGCCTG‑TGCCCGCCCCTTTTTCAAAAATAAAATCTGGCGGGG‑GCCGGACCCGCCCCCACGGGGGAAAGTaaacc > 1:131283/1‑247 (MQ=255) cacCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGt > 1:683627/1‑174 (MQ=255) caTGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCTG‑TGCCCGCCCATTATCCAAACGTAAATTCGGGCGGGC‑ACAGGAc < 1:565525/215‑1 (MQ=255) aTGGTGCCCGATTGCAAAAGAGTAATTCATTACTTGCGGCCCCTCCCCCTGCATTTTTTCTTCTTTTTCA‑AAAAAGGGTTCGTTGAGAAGAAAGAAGATGGGGGTGGTAATGATACGTCTTTCCTCTTTTACATCAAAACAACAGATTTGTTTTTGGGGGGGGGGGCCCTG‑CCCCCCCCCTTTATCAAAACTAAAATTGGGGGGGGA‑AAAGGACCCGCCCCTACGGGAGAATGTAAGCCAATAACTTAccc < 1:125069/251‑1 (MQ=255) tGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCTG‑Tgc < 1:70885/173‑1 (MQ=255) aaGAGTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTAc > 1:461148/1‑115 (MQ=255) gagTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGagaagatagaag > 1:268016/1‑78 (MQ=255) gagTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCTG‑TGCCCGCCCATTATCCAAACGTAAATTCGGGCGGGC‑ACAGGAcc < 1:272364/196‑1 (MQ=255) aatAATACTTTCCTTGCTGCCCCTCCTCCGCCTTTTTTTCTTGTTTTTCG‑AAAAGGCTTTGGTTGAAAAAAAAGAAGATTACGGTGGTAATGATACGTCCTTCCTTTTTTACATCAAAACAACAGGTTTGTTTTGGGGGGGGGGGGTCCGG‑TCCCCGCCATTTATCAAAACGAAAATTCGGGGGGGC‑ACAGGCCCCGCCCCTACGGGAGAATGTAAGCCAATAACTTACCCCGAAAACGGCATACTAATgg < 1:189423/249‑1 (MQ=255) gTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACgg > 1:250003/1‑83 (MQ=255) gTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGAt > 1:640164/1‑93 (MQ=255) gTAATACATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTcc < 1:173172/148‑1 (MQ=255) aCATTACTTGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCTG‑TGCCCGCCCCTTATc > 1:852399/1‑160 (MQ=255) ttGCTGCGCCTGCTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATc > 1:174711/1‑102 (MQ=255) cTCCTGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACAt < 1:614357/89‑1 (MQ=255) | AAATGGGCTTTATTTTCGTCCAGCGCTTTCGCCAATAAATTCACATGACTGGAATCAATCACGATTTCGCCGAATTTCATTAACCCTGTAAATTTACGCTTTGCTTCCCCTTCCGGGAAGGCGGCGACAAATTGTTGATAATCCTCGTAGTCGCAAATCAGCAATTTTTTGAAGCAATCAATCACACCCACATGGTGACCGATTGCCAAAGAGTAATACATTACTTGCTGCGCCTGCTCCGGCACTTGTTCTTCGTTTTCG‑ACAAAGCGTTCGTTGAGAAGATAGAAGATTACGGTGGTCATGATACGTCCTTACTGCTTTACATCTAAGCAACAGAGTTGCTTTTGTAGGGGCGGGTCCTG‑TGCCCGCCCATTATCCAAACGTAAATTCGGGCGGGC‑ACAGGACCCGCCCCTACGGGAGAATGTAAGCCAATAACTTACCCCGAAAACGGCATACTAATGG > 1/460097‑460558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |