| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 41,100 | G→A | G89S (GGT→AGT) | unknown → | DNA polymerase III delta prime subunit (EC 2.7.7.7) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 41,100 | 0 | G | A | 100.0% | 227.2 / NA | 83 | G89S (GGT→AGT) | unknown | DNA polymerase III delta prime subunit (EC 2.7.7.7) |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (38/45); total (38/45) | |||||||||||
TGGCTTACGCCCGTTTATCAGAAAATCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCGGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCCCACCATTTATAGCCGTTGCCAAGTGTGGAATCTTCTGCCGCCGGCGACGGATA > 1/40854‑41346 | tGGCTTACGCCCGTTTATCAGAAAATCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAgtgt < 1:484836/251‑1 (MQ=255)tGGCTTACGCCCGTTTATCAGAAAATCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAgtgt < 1:502262/251‑1 (MQ=255)tGGCTTACGCCCGTTTATCAGAAAATCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAgtgt < 1:841360/251‑1 (MQ=255) tACGCCCGTTTATCAGAAAATCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATc < 1:97456/251‑1 (MQ=255) tACGCCCGTTTATCAGAAAATCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATc < 1:850300/251‑1 (MQ=255) tACGCCCGTTTATCAGAAAATCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATc < 1:812591/251‑1 (MQ=255) tACGCCCGTTTATCAGAAAATCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATc < 1:607571/251‑1 (MQ=255) ccGTTTATCAGAAAATCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAAtt < 1:240577/251‑1 (MQ=255) ccGTTTATCAGAAAATCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAAtt < 1:617496/251‑1 (MQ=255) tATCAGAAAATCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAgtgt < 1:336263/236‑1 (MQ=255) aaaTCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCatgaat > 1:850819/1‑251 (MQ=255) aaaTCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCatgaat > 1:102298/1‑251 (MQ=255) cACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAAtt < 1:524727/235‑1 (MQ=255) cGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAg > 1:774899/1‑251 (MQ=255) cGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAg < 1:284546/251‑1 (MQ=255) ggCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCaa > 1:603612/1‑251 (MQ=255) ggCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCA‑GCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAgtgt > 1:575707/1‑218 (MQ=255) cTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAg < 1:367868/250‑1 (MQ=255) cTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGt > 1:526098/1‑251 (MQ=255) tttGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCa > 1:299898/1‑251 (MQ=255) gCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATc > 1:57150/1‑209 (MQ=255) atcatGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAAtt > 1:797012/1‑206 (MQ=255) atcatGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGc < 1:652754/251‑1 (MQ=255) atGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAAtt > 1:107781/1‑203 (MQ=255) ttGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTc > 1:84045/1‑199 (MQ=255) ttGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCAc < 1:302255/228‑1 (MQ=255) ttGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAg < 1:163228/250‑1 (MQ=255) ttGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAg < 1:800208/250‑1 (MQ=255) ttGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGt > 1:751057/1‑251 (MQ=255) ttGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGCTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGt > 1:584995/1‑251 (MQ=255) gCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATc < 1:872923/191‑1 (MQ=255) cGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTatat < 1:156497/251‑1 (MQ=255) cGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTatat < 1:823932/251‑1 (MQ=255) cGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAAc < 1:132448/251‑1 (MQ=255) cGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAAc < 1:268038/251‑1 (MQ=255) cGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAAc < 1:624388/251‑1 (MQ=255) cGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAAc < 1:693925/251‑1 (MQ=255) aaGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGgcg < 1:160324/251‑1 (MQ=255) aGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGgcg > 1:808660/1‑250 (MQ=255) ggTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACgg < 1:607417/221‑1 (MQ=255) ggTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAAc < 1:883241/244‑1 (MQ=255) ggTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCa > 1:583157/1‑251 (MQ=255) gTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGgcg < 1:378867/248‑1 (MQ=255) gCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTc < 1:156650/161‑1 (MQ=255) cgcAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAg < 1:644661/195‑1 (MQ=255) cGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGaaaa > 1:745553/1‑250 (MQ=255) gTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAAc > 1:282607/1‑250 (MQ=255) gtgCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTtat > 1:585732/1‑190 (MQ=255) tgtttAACGCCAAAGAGCGCGTATCCTTGCGGCGAATGCCATGCCTGTAATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGTCAATGCTATTTTGAAAACCTTGgaag < 1:182207/247‑1 (MQ=255) gCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACCGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGTTCATATTCGTGCCATGAATGAACTGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCCATGCTATTTTGAACACCTTGgaagaa > 1:854465/1‑251 (MQ=255) gCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGgaagaa > 1:581143/1‑251 (MQ=255) gCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGgaagaa > 1:711336/1‑251 (MQ=255) tAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAAccc < 1:207522/251‑1 (MQ=255) aCGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGAtt < 1:541699/180‑1 (MQ=255) aCGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGgaag > 1:361805/1‑244 (MQ=255) gCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGcc > 1:472398/1‑200 (MQ=255) aaaGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAAccc < 1:637531/244‑1 (MQ=255) gcgcGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAacac > 1:476423/1‑250 (MQ=255) gcgcGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAATGATTTatat > 1:782097/1‑175 (MQ=255) aCCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTatat < 1:388/168‑1 (MQ=255) ccTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCAt < 1:296549/251‑1 (MQ=255) tgccatgccTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATc > 1:895894/1‑88 (MQ=255) tgccTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGc < 1:524517/251‑1 (MQ=255) cTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCaaa > 1:491610/1‑251 (MQ=255) cATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAgg > 1:309292/1‑250 (MQ=255) ggCGAACAGTCACACTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAATACGGCAATAAAGGGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGACCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCcca > 1:175244/1‑251 (MQ=255) gCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGccc < 1:438718/249‑1 (MQ=255) cGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCccac < 1:653966/250‑1 (MQ=255) aaCAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCCCACCAt < 1:550185/251‑1 (MQ=255) cAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGgc < 1:271279/234‑1 (MQ=255) gTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGat < 1:204111/221‑1 (MQ=255) tCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCCCACCATTtat < 1:332284/250‑1 (MQ=255) cccTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCCCACCATTTATAg > 1:243936/1‑249 (MQ=255) cccTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCCCACCATTTATAGc < 1:771967/250‑1 (MQ=255) cccTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCCCACCATTTATAGc > 1:667116/1‑250 (MQ=255) gATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCCCACCATTTATAGCCGTTg > 1:71954/1‑251 (MQ=255) tttCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCCCACCATTTATAGCCGTTGc > 1:65477/1‑250 (MQ=255) ttCCAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCCCACCATTTATAGCCg > 1:637577/1‑245 (MQ=255) ccAGCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCt > 1:335959/1‑188 (MQ=255) gCATATTGCGCCCATTGAAAATAAAGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTatat > 1:445110/1‑108 (MQ=255) aaGACATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCccac < 1:157164/205‑1 (MQ=255) cATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCCCACCATTTATAg > 1:563320/1‑210 (MQ=255) cATCAGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCCCACCATTTATAGCCGTTGCCAAGTGTGGAATCTTCTGCCGCCGGCGACGGATa > 1:661256/1‑251 (MQ=255) | TGGCTTACGCCCGTTTATCAGAAAATCACGCAGGCTTTTGAGGAAGGGCTGGGGCATCATGCGTTGCTGATTCGTGCCGATGAAGGTTTGGGCGCAGAACAGCTTTGCCGCCTTTTGGCGCAACGTTTGATGTGCTTAACGCCAAAGAGCGCGGAACCTTGCGGCGAATGCCATGCCTGTCATTTGATGCAGGCGAACAGTCACCCTGATTTCCAGCATATTGCGCCCATTGAAAATAAAGACATCGGTGTAGATCAAATTCGTGCCATGAATGAACAGGCAAGTCAGCACGCGCAACAAAACGGCAATAAAGTGATTTATATTGAACAGGCGCATCGCCTGACGGAATCTGCCGCCAATGCTATTTTGAAAACCTTGGAAGAACCCCGCCCGAACACCTATTTCATTTTGCAGAATGATATGCAAAAGGCGCTGTTGCCCACCATTTATAGCCGTTGCCAAGTGTGGAATCTTCTGCCGCCGGCGACGGATA > 1/40854‑41346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |