| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 444,159 | C→T | intergenic (‑93/‑125) | unknown ← / → unknown | Inner membrane protein YebS/RNA chaperone ProQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 444,159 | 0 | C | T | 100.0% | 77.8 / NA | 30 | intergenic (‑93/‑125) | unknown/unknown | Inner membrane protein YebS/RNA chaperone ProQ |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (14/16); total (14/16) | |||||||||||
ATATAACACATTCTGGCAGCGCGGACAAAGGGCACGTTGCCCTCGTTGTAATGCAGAAATTTTAACCACGGCATTGCATTCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGCGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATCTATGCAGGATTTCGCAATGACAGAAATACAAAAGTTAACAAATAATAAAGAGATTATTGCTTATTTAGCGGAAAAATTTCCGCTATGTTTTTCTATTGAGGGGGAAGCCAAACCGTTAAAAATCGGTTTGTTT > 1/443923‑444400 | atatAACACATTCTGGCAGCGCGGACAAAGGGCACGTTGCCCTCGTTGTAATGCAGAAATTTTAACCACGGCATTGCATTCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGCAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTcgcg > 1:438433/1‑251 (MQ=255) acacATTCTGGCAGCGCGGACAAAGGGCACGTTGCCCTCGTTGTAATGCAGAAATTTTAACCACGGCATTGCATTCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAAtt > 1:282218/1‑251 (MQ=255) caTTCTGGCAGCGCGGACAAAGGGCACGTTGCCCTCGTTGTAATGCAGAAATTTTAACCACGGCATTGCATTCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATttat > 1:650315/1‑251 (MQ=255) aTTCTGGCAGCGCGGACAAAGGGCACGTTGCCCTCGTTGTAATGCAGAAATTTTAACCACGGCATTGCATTCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATttatt < 1:621714/251‑1 (MQ=255) tCTGGCAGCGCGGACAAAGGGCACGTTGCCCTCGTTGTAATGCAGAAATTTTAACCACGGCATTGCATTCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTtattat < 1:493482/251‑1 (MQ=255) gggCACGTTGCCCTCGTTGTAATGCAGAAATTTTAACCACGGCATTGCATTCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGtagataga > 1:55563/1‑251 (MQ=255) cACGTTGCCCTCGTTGTAATGCAGAAATTTTAACCACGGCATTGCATTCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGtag < 1:419572/243‑1 (MQ=255) ccTCGTTGTAATGCAGAAATTTTAACCACGGCATTGCATTCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGt > 1:655056/1‑251 (MQ=255) aaTTTTAACCACGGCATTGCATTCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATttatt > 1:408338/1‑203 (MQ=255) ccACGGCATTGCATTCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAAc < 1:123839/251‑1 (MQ=255) gcattgcattCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTaaa > 1:877365/1‑245 (MQ=255) cGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTAc < 1:317869/251‑1 (MQ=255) gaacgaGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACttatta > 1:67662/1‑251 (MQ=255) aTGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATttatt < 1:64714/161‑1 (MQ=255) aTGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGc < 1:223171/212‑1 (MQ=255) aaTTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATCTATGCAGGATTTCGCAATGACAGaa > 1:312416/1‑251 (MQ=255) gTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTa < 1:515963/184‑1 (MQ=255) aaTCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATCTATGCAGGATTTCGCAATGACAGAAATACAAAAGTTAACAAATAATAAag < 1:315192/250‑1 (MQ=255) aCCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTa > 1:823970/1‑164 (MQ=255) tatTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATc < 1:313256/184‑1 (MQ=255) aTTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATCTATGCAGGATTTCGCAATGACAGAAATACAAAAGTTAACAAATAATAAAGAGATTATTGCTTATTTAGCGGAAAAATTTCCg > 1:604096/1‑250 (MQ=255) aTTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATCTATGCAGGATTTCGCAATGACAGAAATACAAAAGTTAACAAATAATAAAGAGATTATTGCTTATTTAGCGGAAAAATTTCCg > 1:293081/1‑250 (MQ=255) taCTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAAt < 1:477018/105‑1 (MQ=255) cTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATCTATGCAGGATTTCGCAATGACAGAAATACAAAAGTTAACAAATAATAAAGAGATTATTGCTTATTTAGCGGAAAAATTTCCGCTATGtttt < 1:809775/251‑1 (MQ=255) gTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATCTATGCAGGATTTCGc < 1:374209/173‑1 (MQ=255) cGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATCTATGCAGGATTTCGCAATGACAGAAATACAAAAGTTAACAAATAATAAAGAGATTATTGCTTATTTAGCGGAAAAATTTCCGCTATGTTTTTCTATTGAgg < 1:157293/251‑1 (MQ=255) ttttAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATCTATGCAGGATTTCGCAATGACAGAAATACAAAAGTTAACAAATAATAAAGAGATTATTGCTTATTTAGCGGAAAAATTTCCGCTATGTTTTTCTATTGAggggg < 1:881364/251‑1 (MQ=255) gAATTTATCTTGCTTAGACAGAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTaa < 1:351350/80‑1 (MQ=255) gAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATCTATGCAGGATTTCGCAATGACAGAAATACAAAAGTTAACAAATAATAAAGAGATTATTGCTTATTTAGCGGAAAAATTTCCGCTATGTTTTTCTATTGAGGGGGAAGCCAAACCGTTAAAAATCGgtttgttt > 1:35909/1‑251 (MQ=255) gAAAAAGTGTGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTATTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATCTATGCAGGATTTCGCAATGACAGAAATACAAAAGTTAACAAATAATAAAGAGATTATTGCTTATTTAGCGGAAAAATTTCCGCTATGTTTTTc > 1:598252/1‑211 (MQ=255) | ATATAACACATTCTGGCAGCGCGGACAAAGGGCACGTTGCCCTCGTTGTAATGCAGAAATTTTAACCACGGCATTGCATTCACCGCAACGAACGAGGCGATGAAAAGTAGCGTCGGCCAAATTTAACTTGGAATGTGCTGTCATGAATCAAGTTACCTAAATATTAAAGAAGCGCGTATTTTATACTGTATTTTTCGTTTTTAGTACGAATTTATCTTGCTTAGACAGAAAAAGTGCGGTCATTTTTCGCGGAATTTATTATTTCTTTTCAGTAGATAGATTATTAATTGTCATTTTTTCTGAAAGTAAGCTAAACTATGGTAAGTTTTTCTACTTATTAAAATCTATGCAGGATTTCGCAATGACAGAAATACAAAAGTTAACAAATAATAAAGAGATTATTGCTTATTTAGCGGAAAAATTTCCGCTATGTTTTTCTATTGAGGGGGAAGCCAAACCGTTAAAAATCGGTTTGTTT > 1/443923‑444400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |