| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 6 | 25,159 | A→C | R7R (CGA→CGC) | unknown → | Transcriptional regulator, LysR family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 6 | 25,159 | 0 | A | C | 100.0% | 246.9 / NA | 87 | R7R (CGA→CGC) | unknown | Transcriptional regulator, LysR family |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (53/34); total (53/34) | |||||||||||
GCCATGCAGAAATCGATTAAAAAGGGGAGCGTTGTAAGTAATGCTATTTTTCCCTCC‑TTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGATATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGGCTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAGGTTATAAAAAAATATAATGAAATGCACTCAAATCTGCAT > 6/24918‑25393 | gCCATGCAGAAATCGATTAAAAAGGGGAGCGTTGTAAGTAATGCTATTTTTCCCTCCTTTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATCTTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGAGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGt > 1:829422/1‑251 (MQ=255) ggggAGCGTTGTAAGTAATGCTATTTTTCCCTCC‑TTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCaa > 1:191110/1‑251 (MQ=255) gCGTTGTAAGTAATGCTATTTTTCCCTCC‑TTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGa > 1:882647/1‑251 (MQ=255) gTTGTAAGTAATGCTATTTTTCCCTCC‑TTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATc > 1:788587/1‑246 (MQ=255) ttGTAAGTAATGCTATTTTTCCCTCC‑TTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGc < 1:889418/250‑1 (MQ=255) taagtaaTGCTATTTTTCCCTCC‑TTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAgg < 1:810295/250‑1 (MQ=255) tttttCCCTCC‑TTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAAtc < 1:630507/251‑1 (MQ=255) cctcc‑tTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACg < 1:410047/251‑1 (MQ=255) cctcc‑tTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACg < 1:20856/251‑1 (MQ=255) cc‑tTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGttt > 1:300161/1‑251 (MQ=255) cc‑tTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGttt > 1:808629/1‑251 (MQ=255) c‑tTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAAc > 1:409010/1‑210 (MQ=255) gCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCatgat < 1:837147/240‑1 (MQ=255) gCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCATGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGAtt > 1:453633/1‑251 (MQ=255) aaaagaaaTATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAgt < 1:889519/249‑1 (MQ=255) ggggTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGa > 1:161630/1‑157 (MQ=255) gggTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAAtc < 1:63429/159‑1 (MQ=255) gggTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGc > 1:874054/1‑185 (MQ=255) gggTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTaaa > 1:62935/1‑233 (MQ=255) gggTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACg > 1:783230/1‑235 (MQ=255) ggTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCg > 1:555705/1‑119 (MQ=255) ggTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTg > 1:366541/1‑154 (MQ=255) ggTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTg > 1:560449/1‑251 (MQ=255) ggTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTg > 1:830219/1‑251 (MQ=255) gTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAAt > 1:361746/1‑248 (MQ=255) gTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGt > 1:537526/1‑251 (MQ=255) gTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGt > 1:402196/1‑251 (MQ=255) aaGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAAt > 1:262759/1‑112 (MQ=255) aaGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTtc < 1:826922/163‑1 (MQ=255) aaGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGcc > 1:313065/1‑169 (MQ=255) aaGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAAt > 1:21336/1‑244 (MQ=255) aaGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGa > 1:287313/1‑251 (MQ=255) aaGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGa > 1:776899/1‑251 (MQ=255) gCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAAt > 1:30120/1‑242 (MQ=255) ataCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGTGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAgt < 1:428071/214‑1 (MQ=255) taCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGc > 1:451677/1‑131 (MQ=255) taCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAAt < 1:877457/146‑1 (MQ=255) aCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAAc < 1:268604/115‑1 (MQ=255) aCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAAtc > 1:35760/1‑146 (MQ=255) aCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCa > 1:589095/1‑173 (MQ=255) aCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATaaggaagg > 1:219405/1‑204 (MQ=255) aCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAgt > 1:363528/1‑212 (MQ=255) aCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAgt < 1:707210/212‑1 (MQ=255) aCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACg < 1:397909/222‑1 (MQ=255) aCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACtt < 1:207263/251‑1 (MQ=255) aCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACtt > 1:786591/1‑251 (MQ=255) aCTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACtt > 1:541006/1‑251 (MQ=255) cTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAAtc < 1:148753/145‑1 (MQ=255) cTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAAt < 1:829664/236‑1 (MQ=255) cTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTa > 1:835006/1‑251 (MQ=255) cTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTa > 1:788803/1‑251 (MQ=255) gTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTATCTTATGTgg < 1:33261/249‑1 (MQ=255) gCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATaaggaag < 1:667768/192‑1 (MQ=255) ccGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAggac < 1:842299/123‑3 (MQ=255) cGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGaaaa < 1:332675/251‑1 (MQ=255) ggTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAAt > 1:56933/1‑251 (MQ=255) ggTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAAt > 1:485957/1‑251 (MQ=255) gTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAAtt > 1:604971/1‑251 (MQ=255) cACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATtactac < 1:161749/249‑1 (MQ=255) cACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATtactac < 1:744009/249‑1 (MQ=255) gCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTg > 1:668008/1‑213 (MQ=255) gCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATtactac > 1:564880/1‑245 (MQ=255) gCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGAt > 1:390946/1‑251 (MQ=255) gCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGAt > 1:299295/1‑251 (MQ=255) ttACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGc > 1:705937/1‑250 (MQ=255) tACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATc > 1:532045/1‑95 (MQ=255) aCGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAgg < 1:541989/250‑1 (MQ=255) aCGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACGTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAgg < 1:870299/250‑1 (MQ=255) ggCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCa > 1:26123/1‑133 (MQ=255) ggCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACtt > 1:601610/1‑211 (MQ=255) ggCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATtact > 1:668363/1‑229 (MQ=255) ggCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAag < 1:206734/244‑1 (MQ=255) ggCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATtactac < 1:537242/224‑1 (MQ=255) ggCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAGGTTATaaaaaaa > 1:244788/1‑251 (MQ=255) gtgGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAAc < 1:811369/194‑1 (MQ=255) gtgGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATtactac > 1:140029/1‑216 (MQ=255) tgGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAGGTTATAAAAAAATATAATGa < 1:874865/250‑1 (MQ=255) tgGAGGAAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAGGTTATAAAAAAATATAATGa < 1:74043/250‑1 (MQ=255) gaAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAGGTTATAAAAAAATATAATGAAATGCa > 1:536204/1‑251 (MQ=255) gaAGATGACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAGGTTATAAAAAAATATAATGAAATGCa > 1:155876/1‑251 (MQ=255) gACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAggac > 1:40431/1‑66 (MQ=255) gACATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAGGTTATAAAAAAATATAATGAAATGCACTCaaa > 1:18501/1‑251 (MQ=255) cATGGATATTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAGGTTATAAAAAAATATAATGAAATGCAc < 1:488277/244‑1 (MQ=255) atatTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAGGTTATAAAAAAATATAATGAAATGCACTCAAATCTGCAt < 1:286346/251‑1 (MQ=255) atatTCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAGGTTATAAAAAAATATAATGAAATGCACTCAAATCTGCAt > 1:54998/1‑251 (MQ=255) ttCGACATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGACTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTAtgtg < 1:275903/179‑1 (MQ=255) cATTTACGCTATTTCGTTTCAATCGTGGATAACGACTTCAATc < 1:671991/43‑1 (MQ=255) | GCCATGCAGAAATCGATTAAAAAGGGGAGCGTTGTAAGTAATGCTATTTTTCCCTCC‑TTTTTATGTGTGAATTCGTCGGACTTGGTGAGCTGAAATTAGCAAAAATTTTTTCAGAAAAGAAATATATATTTTTGAAAGGGGTATAAGCTATACTTATAGGTCGCCGGTGGGAGCACCGCTTTACATGGACGGGCGAAAGGCTCATTGTGGAGGAAGATGACATGGATATTCGACATTTACGATATTTCGTTTCAATCGTGGATAACGACTTCAATCTGAGCAGGGCTTCATTGAATCTCTACGTTTCTCAGCCCGCGCTGAGCATGATGATCAGCGATTTTGAAAATAAGGAAGGGGTGCAGTTGTTTAAACGGGCGCAGGGGAAAATTGTCGGATTAACTTATGTGGGCGAAAATTACTACCGTGATGCCAAAGAGGTTATAAAAAAATATAATGAAATGCACTCAAATCTGCAT > 6/24918‑25393 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |